BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010g20 (783 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 234 4e-58 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 234 4e-58 emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 234 4e-58 emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 234 4e-58 emb|CT836589.1| Oryza sativa (indica cultivar-group) cDNA clone:... 127 7e-26 >emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 234 bits (118), Expect = 4e-58 Identities = 145/154 (94%) Strand = Plus / Minus Query: 234 gggctcggcggcgagggtgttgcaggagacgtgtagctacatcaggagcctgcaccaaga 293 |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 24087 gggctcggcggcgagggttttgcaggagacgtgcagctacatcaggagcctgcaccagga 24028 Query: 294 ggtggacaacctcagcgagacgctcgccgagctgctcgcctccgccgacgtctccagcga 353 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 24027 ggtggacaacctcagcgagacgctcgctcagctgctcgcctcccccgacgtcaccagcga 23968 Query: 354 ccaggcggccgtcatcagaagcctccttatgtga 387 |||||||||||||||||| |||||||| |||||| Sbjct: 23967 ccaggcggccgtcatcaggagcctcctcatgtga 23934 Score = 157 bits (79), Expect = 8e-35 Identities = 117/127 (92%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 657 gatcagtggctttaattata-gaagacagtagtgtactactactagctagtctagtgaga 715 |||||||| |||||||||| || |||||||| || |||| |||||||||||||||||| Sbjct: 23605 gatcagtgcttttaattataagaggacagtagagtg-tactgctagctagtctagtgaga 23547 Query: 716 gcttcatgttgctgtactttgaatggctaatgcgtgttgtttaatgcatggatgctttat 775 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23546 gcttcatgtttctgtactttgaaaggctaatgcgtgttgtttaatgcatggatgctttat 23487 Query: 776 taatttg 782 ||||||| Sbjct: 23486 taatttg 23480 Score = 113 bits (57), Expect = 1e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 147 gtcgatctcggaggaccagatcgccgagctcctgtccaagctgcaggcgctgctccccga 206 |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 24274 gtcgatctcggaggaccagatcgccgagcttctctccaagcttcaggccctgctcccgga 24215 Query: 207 gtctcaaactcgcaatggcgcgcataggg 235 |||||| ||||||||||||| ||||||| Sbjct: 24214 gtctcaggctcgcaatggcgcccataggg 24186 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 234 bits (118), Expect = 4e-58 Identities = 145/154 (94%) Strand = Plus / Minus Query: 234 gggctcggcggcgagggtgttgcaggagacgtgtagctacatcaggagcctgcaccaaga 293 |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 32691820 gggctcggcggcgagggttttgcaggagacgtgcagctacatcaggagcctgcaccagga 32691761 Query: 294 ggtggacaacctcagcgagacgctcgccgagctgctcgcctccgccgacgtctccagcga 353 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 32691760 ggtggacaacctcagcgagacgctcgctcagctgctcgcctcccccgacgtcaccagcga 32691701 Query: 354 ccaggcggccgtcatcagaagcctccttatgtga 387 |||||||||||||||||| |||||||| |||||| Sbjct: 32691700 ccaggcggccgtcatcaggagcctcctcatgtga 32691667 Score = 157 bits (79), Expect = 8e-35 Identities = 117/127 (92%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 657 gatcagtggctttaattata-gaagacagtagtgtactactactagctagtctagtgaga 715 |||||||| |||||||||| || |||||||| || |||| |||||||||||||||||| Sbjct: 32691338 gatcagtgcttttaattataagaggacagtagagtg-tactgctagctagtctagtgaga 32691280 Query: 716 gcttcatgttgctgtactttgaatggctaatgcgtgttgtttaatgcatggatgctttat 775 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32691279 gcttcatgtttctgtactttgaaaggctaatgcgtgttgtttaatgcatggatgctttat 32691220 Query: 776 taatttg 782 ||||||| Sbjct: 32691219 taatttg 32691213 Score = 113 bits (57), Expect = 1e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 147 gtcgatctcggaggaccagatcgccgagctcctgtccaagctgcaggcgctgctccccga 206 |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 32692007 gtcgatctcggaggaccagatcgccgagcttctctccaagcttcaggccctgctcccgga 32691948 Query: 207 gtctcaaactcgcaatggcgcgcataggg 235 |||||| ||||||||||||| ||||||| Sbjct: 32691947 gtctcaggctcgcaatggcgcccataggg 32691919 >emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 234 bits (118), Expect = 4e-58 Identities = 145/154 (94%) Strand = Plus / Minus Query: 234 gggctcggcggcgagggtgttgcaggagacgtgtagctacatcaggagcctgcaccaaga 293 |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 51255 gggctcggcggcgagggttttgcaggagacgtgcagctacatcaggagcctgcaccagga 51196 Query: 294 ggtggacaacctcagcgagacgctcgccgagctgctcgcctccgccgacgtctccagcga 353 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 51195 ggtggacaacctcagcgagacgctcgctcagctgctcgcctcccccgacgtcaccagcga 51136 Query: 354 ccaggcggccgtcatcagaagcctccttatgtga 387 |||||||||||||||||| |||||||| |||||| Sbjct: 51135 ccaggcggccgtcatcaggagcctcctcatgtga 51102 Score = 157 bits (79), Expect = 8e-35 Identities = 117/127 (92%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 657 gatcagtggctttaattata-gaagacagtagtgtactactactagctagtctagtgaga 715 |||||||| |||||||||| || |||||||| || |||| |||||||||||||||||| Sbjct: 50773 gatcagtgcttttaattataagaggacagtagagtg-tactgctagctagtctagtgaga 50715 Query: 716 gcttcatgttgctgtactttgaatggctaatgcgtgttgtttaatgcatggatgctttat 775 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 50714 gcttcatgtttctgtactttgaaaggctaatgcgtgttgtttaatgcatggatgctttat 50655 Query: 776 taatttg 782 ||||||| Sbjct: 50654 taatttg 50648 Score = 113 bits (57), Expect = 1e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 147 gtcgatctcggaggaccagatcgccgagctcctgtccaagctgcaggcgctgctccccga 206 |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 51442 gtcgatctcggaggaccagatcgccgagcttctctccaagcttcaggccctgctcccgga 51383 Query: 207 gtctcaaactcgcaatggcgcgcataggg 235 |||||| ||||||||||||| ||||||| Sbjct: 51382 gtctcaggctcgcaatggcgcccataggg 51354 >emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 234 bits (118), Expect = 4e-58 Identities = 145/154 (94%) Strand = Plus / Minus Query: 234 gggctcggcggcgagggtgttgcaggagacgtgtagctacatcaggagcctgcaccaaga 293 |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || Sbjct: 86841 gggctcggcggcgagggttttgcaggagacgtgcagctacatcaggagcctgcaccagga 86782 Query: 294 ggtggacaacctcagcgagacgctcgccgagctgctcgcctccgccgacgtctccagcga 353 ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 86781 ggtggacaacctcagcgagacgctcgctcagctgctcgcctcccccgacgtcaccagcga 86722 Query: 354 ccaggcggccgtcatcagaagcctccttatgtga 387 |||||||||||||||||| |||||||| |||||| Sbjct: 86721 ccaggcggccgtcatcaggagcctcctcatgtga 86688 Score = 157 bits (79), Expect = 8e-35 Identities = 117/127 (92%), Gaps = 2/127 (1%) Strand = Plus / Minus Query: 657 gatcagtggctttaattata-gaagacagtagtgtactactactagctagtctagtgaga 715 |||||||| |||||||||| || |||||||| || |||| |||||||||||||||||| Sbjct: 86359 gatcagtgcttttaattataagaggacagtagagtg-tactgctagctagtctagtgaga 86301 Query: 716 gcttcatgttgctgtactttgaatggctaatgcgtgttgtttaatgcatggatgctttat 775 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86300 gcttcatgtttctgtactttgaaaggctaatgcgtgttgtttaatgcatggatgctttat 86241 Query: 776 taatttg 782 ||||||| Sbjct: 86240 taatttg 86234 Score = 113 bits (57), Expect = 1e-21 Identities = 81/89 (91%) Strand = Plus / Minus Query: 147 gtcgatctcggaggaccagatcgccgagctcctgtccaagctgcaggcgctgctccccga 206 |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 87028 gtcgatctcggaggaccagatcgccgagcttctctccaagcttcaggccctgctcccgga 86969 Query: 207 gtctcaaactcgcaatggcgcgcataggg 235 |||||| ||||||||||||| ||||||| Sbjct: 86968 gtctcaggctcgcaatggcgcccataggg 86940 >emb|CT836589.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z79, full insert sequence Length = 547 Score = 127 bits (64), Expect = 7e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 242 cggcgagggtgttgcaggagacgtgtagctacatcaggagcctgcaccaagaggtggaca 301 ||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 225 cggcgagggtgctgcaggagacgtgcagctacatccggagcctgcaccgggaggtggacg 284 Query: 302 acctcagcgagacgctcgccgagctgctcgcctccgccgacgtc 345 ||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 285 acctcagcgagcgcctcgccgagctgctcgccgccgccgacgtc 328