BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010d05 (1019 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT828813.1| Oryza sativa (indica cultivar-group) cDNA clone:... 771 0.0 ref|NM_001052325.1| Oryza sativa (japonica cultivar-group) Os02g... 771 0.0 dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 771 0.0 gb|AY103737.1| Zea mays PCO126068 mRNA sequence 702 0.0 gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase prec... 626 e-176 >emb|CT828813.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119B14, full insert sequence Length = 1030 Score = 771 bits (389), Expect = 0.0 Identities = 545/597 (91%) Strand = Plus / Plus Query: 234 gatgacttattgaagggcatattttttgaggtaaagaagaaatttgagacagcacttggg 293 |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 237 gatgacctattgaagggcatattttttgaggtaaagaagaaatttgagactgcccttggt 296 Query: 294 gtccttaagaaggaaaaggtaacaattgatccggatgacccagcagcagttgctcgttat 353 || ||||||||||||||| | || |||||||| ||||| || ||||||||| |||||||| Sbjct: 297 gtacttaagaaggaaaagatcactattgatccagatgatcctgcagcagtttctcgttat 356 Query: 354 gcccaagtcatgaagactgtaagagaaaaggcagatcttctttctgactctcagagaatt 413 |||||||||||||||||||||||| |||||||||||||||| || |||||| |||| ||| Sbjct: 357 gcccaagtcatgaagactgtaagacaaaaggcagatcttctatccgactctgagaggatt 416 Query: 414 aaatatactattgagacttttacgaagggcgtccctgatgcacggacttacttgaatacc 473 |||||||| || || || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 417 aaatataccatcgacacctttacaaagggcatccctgatgcacggacttacttgaatact 476 Query: 474 cttcaggagatcagaataaagagtggccttgttgatgatcttggtgctgaggctatgatg 533 |||||||||||||| ||||||||||||||| | |||||| | |||||||||||||||||| Sbjct: 477 cttcaggagatcaggataaagagtggccttatagatgatatgggtgctgaggctatgatg 536 Query: 534 atggaagctcttgagaaagttgagaaggacattaagaagccactcctgaggagtgacaag 593 |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 537 atggaagcccttgagaaagttgagaaggagattaagaagccacttctgaggagtgacaag 596 Query: 594 aataatatgggtctcctcttggcagaatttgagaagataaacaaaaagcttggcattcgg 653 || ||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 597 aagaatatgggtctcctcttggcagagtttgagaagataaacaaaaagcttggaatccgc 656 Query: 654 aaggaggatcttcccaagattgaggaagagcttgaactgcaaattgcgaaaggtgagctg 713 |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||| Sbjct: 657 aaggaggatcttcccaagattgaggaagagcttgaattggaaattgccaaaagtgagctg 716 Query: 714 acggaacttaagaaggattgtattgaagcaatggagacccaactaaagagggaggagttt 773 ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 717 acggagcttaagaaggaatgtgttgaagcaatggaggttcaactaaagagggaggagttc 776 Query: 774 aaagatgaagagatgcctgatgtcaggaaattggacatcagaaacttcctgtaggcc 830 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 777 aaagacgaggagatgcctgatgtcaagaagttggacatcagaaacttcctgtaggcc 833 Score = 176 bits (89), Expect = 1e-40 Identities = 110/117 (94%) Strand = Plus / Plus Query: 88 ccgcatccatggcgttggccgctcgcctcgtctcccgctcccgtcagctatattctgctc 147 ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 100 ccgcagccatggcgttggccgctcgcctcgtctcccgctcccggcagctatactctgctc 159 Query: 148 aagctgctttggcaaatggaggtgtcactcaagtccgctcgtatgccaaggatgcag 204 ||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 160 aagctgccttggcaaatggaggtgccactcaagtccgcttgtatgccaaggaggcag 216 Score = 113 bits (57), Expect = 1e-21 Identities = 83/89 (93%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 933 gaatgttattcttgccttttgtaataaaa-ctgcaccaaagtacaaagaca-gtcaaccg 990 ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||| | Sbjct: 921 gaatgttattcttgctttttgtaataaaaactgcaccgaagtacaaagacaagtcaacgg 980 Query: 991 ttgagttggattgcttgttactttcctgc 1019 ||||||||||||||||||||| ||||||| Sbjct: 981 ttgagttggattgcttgttaccttcctgc 1009 >ref|NM_001052325.1| Oryza sativa (japonica cultivar-group) Os02g0131300 (Os02g0131300) mRNA, complete cds Length = 1125 Score = 771 bits (389), Expect = 0.0 Identities = 545/597 (91%) Strand = Plus / Plus Query: 234 gatgacttattgaagggcatattttttgaggtaaagaagaaatttgagacagcacttggg 293 |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 214 gatgacctattgaagggcatattttttgaggtaaagaagaaatttgagactgcccttggt 273 Query: 294 gtccttaagaaggaaaaggtaacaattgatccggatgacccagcagcagttgctcgttat 353 || ||||||||||||||| | || |||||||| ||||| || ||||||||| |||||||| Sbjct: 274 gtacttaagaaggaaaagatcactattgatccagatgatcctgcagcagtttctcgttat 333 Query: 354 gcccaagtcatgaagactgtaagagaaaaggcagatcttctttctgactctcagagaatt 413 |||||||||||||||||||||||| |||||||||||||||| || |||||| |||| ||| Sbjct: 334 gcccaagtcatgaagactgtaagacaaaaggcagatcttctatccgactctgagaggatt 393 Query: 414 aaatatactattgagacttttacgaagggcgtccctgatgcacggacttacttgaatacc 473 |||||||| || || || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 394 aaatataccatcgacacctttacaaagggcatccctgatgcacggacttacttgaatact 453 Query: 474 cttcaggagatcagaataaagagtggccttgttgatgatcttggtgctgaggctatgatg 533 |||||||||||||| ||||||||||||||| | |||||| | |||||||||||||||||| Sbjct: 454 cttcaggagatcaggataaagagtggccttatagatgatatgggtgctgaggctatgatg 513 Query: 534 atggaagctcttgagaaagttgagaaggacattaagaagccactcctgaggagtgacaag 593 |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 514 atggaagcccttgagaaagttgagaaggagattaagaagccacttctgaggagtgacaag 573 Query: 594 aataatatgggtctcctcttggcagaatttgagaagataaacaaaaagcttggcattcgg 653 || ||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 574 aagaatatgggtctcctcttggcagagtttgagaagataaacaaaaagcttggaatccgc 633 Query: 654 aaggaggatcttcccaagattgaggaagagcttgaactgcaaattgcgaaaggtgagctg 713 |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||| Sbjct: 634 aaggaggatcttcccaagattgaggaagagcttgaattggaaattgccaaaagtgagctg 693 Query: 714 acggaacttaagaaggattgtattgaagcaatggagacccaactaaagagggaggagttt 773 ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 694 acggagcttaagaaggaatgtgttgaagcaatggaggttcaactaaagagggaggagttc 753 Query: 774 aaagatgaagagatgcctgatgtcaggaaattggacatcagaaacttcctgtaggcc 830 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 754 aaagacgaggagatgcctgatgtcaagaagttggacatcagaaacttcctgtaggcc 810 Score = 176 bits (89), Expect = 1e-40 Identities = 110/117 (94%) Strand = Plus / Plus Query: 88 ccgcatccatggcgttggccgctcgcctcgtctcccgctcccgtcagctatattctgctc 147 ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 77 ccgcagccatggcgttggccgctcgcctcgtctcccgctcccggcagctatactctgctc 136 Query: 148 aagctgctttggcaaatggaggtgtcactcaagtccgctcgtatgccaaggatgcag 204 ||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 137 aagctgccttggcaaatggaggtgccactcaagtccgcttgtatgccaaggaggcag 193 Score = 113 bits (57), Expect = 1e-21 Identities = 83/89 (93%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 933 gaatgttattcttgccttttgtaataaaa-ctgcaccaaagtacaaagaca-gtcaaccg 990 ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||| | Sbjct: 898 gaatgttattcttgctttttgtaataaaaactgcaccgaagtacaaagacaagtcaacgg 957 Query: 991 ttgagttggattgcttgttactttcctgc 1019 ||||||||||||||||||||| ||||||| Sbjct: 958 ttgagttggattgcttgttaccttcctgc 986 >dbj|AK066913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089B14, full insert sequence Length = 1126 Score = 771 bits (389), Expect = 0.0 Identities = 545/597 (91%) Strand = Plus / Plus Query: 234 gatgacttattgaagggcatattttttgaggtaaagaagaaatttgagacagcacttggg 293 |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 215 gatgacctattgaagggcatattttttgaggtaaagaagaaatttgagactgcccttggt 274 Query: 294 gtccttaagaaggaaaaggtaacaattgatccggatgacccagcagcagttgctcgttat 353 || ||||||||||||||| | || |||||||| ||||| || ||||||||| |||||||| Sbjct: 275 gtacttaagaaggaaaagatcactattgatccagatgatcctgcagcagtttctcgttat 334 Query: 354 gcccaagtcatgaagactgtaagagaaaaggcagatcttctttctgactctcagagaatt 413 |||||||||||||||||||||||| |||||||||||||||| || |||||| |||| ||| Sbjct: 335 gcccaagtcatgaagactgtaagacaaaaggcagatcttctatccgactctgagaggatt 394 Query: 414 aaatatactattgagacttttacgaagggcgtccctgatgcacggacttacttgaatacc 473 |||||||| || || || ||||| |||||| |||||||||||||||||||||||||||| Sbjct: 395 aaatataccatcgacacctttacaaagggcatccctgatgcacggacttacttgaatact 454 Query: 474 cttcaggagatcagaataaagagtggccttgttgatgatcttggtgctgaggctatgatg 533 |||||||||||||| ||||||||||||||| | |||||| | |||||||||||||||||| Sbjct: 455 cttcaggagatcaggataaagagtggccttatagatgatatgggtgctgaggctatgatg 514 Query: 534 atggaagctcttgagaaagttgagaaggacattaagaagccactcctgaggagtgacaag 593 |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 515 atggaagcccttgagaaagttgagaaggagattaagaagccacttctgaggagtgacaag 574 Query: 594 aataatatgggtctcctcttggcagaatttgagaagataaacaaaaagcttggcattcgg 653 || ||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 575 aagaatatgggtctcctcttggcagagtttgagaagataaacaaaaagcttggaatccgc 634 Query: 654 aaggaggatcttcccaagattgaggaagagcttgaactgcaaattgcgaaaggtgagctg 713 |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||| Sbjct: 635 aaggaggatcttcccaagattgaggaagagcttgaattggaaattgccaaaagtgagctg 694 Query: 714 acggaacttaagaaggattgtattgaagcaatggagacccaactaaagagggaggagttt 773 ||||| ||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 695 acggagcttaagaaggaatgtgttgaagcaatggaggttcaactaaagagggaggagttc 754 Query: 774 aaagatgaagagatgcctgatgtcaggaaattggacatcagaaacttcctgtaggcc 830 ||||| || |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 755 aaagacgaggagatgcctgatgtcaagaagttggacatcagaaacttcctgtaggcc 811 Score = 176 bits (89), Expect = 1e-40 Identities = 110/117 (94%) Strand = Plus / Plus Query: 88 ccgcatccatggcgttggccgctcgcctcgtctcccgctcccgtcagctatattctgctc 147 ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 78 ccgcagccatggcgttggccgctcgcctcgtctcccgctcccggcagctatactctgctc 137 Query: 148 aagctgctttggcaaatggaggtgtcactcaagtccgctcgtatgccaaggatgcag 204 ||||||| |||||||||||||||| |||||||||||||| |||||||||||| |||| Sbjct: 138 aagctgccttggcaaatggaggtgccactcaagtccgcttgtatgccaaggaggcag 194 Score = 113 bits (57), Expect = 1e-21 Identities = 83/89 (93%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 933 gaatgttattcttgccttttgtaataaaa-ctgcaccaaagtacaaagaca-gtcaaccg 990 ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||| | Sbjct: 899 gaatgttattcttgctttttgtaataaaaactgcaccgaagtacaaagacaagtcaacgg 958 Query: 991 ttgagttggattgcttgttactttcctgc 1019 ||||||||||||||||||||| ||||||| Sbjct: 959 ttgagttggattgcttgttaccttcctgc 987 >gb|AY103737.1| Zea mays PCO126068 mRNA sequence Length = 1045 Score = 702 bits (354), Expect = 0.0 Identities = 651/750 (86%) Strand = Plus / Plus Query: 94 ccatggcgttggccgctcgcctcgtctcccgctcccgtcagctatattctgctcaagctg 153 |||||||| ||||||||||||||||||| ||||||||||||||| |||| | |||||| | Sbjct: 125 ccatggcgctggccgctcgcctcgtctcgcgctcccgtcagctacattcggttcaagcag 184 Query: 154 ctttggcaaatggaggtgtcactcaagtccgctcgtatgccaaggatgcagctccagctg 213 |||| || |||||||||| ||||||||| ||||| | ||||||||||||||||||||||| Sbjct: 185 cttttgcgaatggaggtgccactcaagttcgctcctttgccaaggatgcagctccagctg 244 Query: 214 accgccctcctgtcagcggagatgacttattgaagggcatattttttgaggtaaagaaga 273 |||| |||||||| || || ||||| | ||||||||||||| |||||||||||||||| Sbjct: 245 accgtcctcctgttagtggggatgatctcctgaagggcatattctttgaggtaaagaaga 304 Query: 274 aatttgagacagcacttggggtccttaagaaggaaaaggtaacaattgatccggatgacc 333 | ||||||||||| ||||| |||||||| ||||||||| | || |||||||| ||||||| Sbjct: 305 agtttgagacagctcttggcgtccttaaaaaggaaaagattactattgatccagatgacc 364 Query: 334 cagcagcagttgctcgttatgcccaagtcatgaagactgtaagagaaaaggcagatcttc 393 |||| |||||| |||| ||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 365 cagcggcagtttctcgatatgctcaagtcatgaagactgtaagggaaaaggcggatcttc 424 Query: 394 tttctgactctcagagaattaaatatactattgagacttttacgaagggcgtccctgatg 453 ||||||| ||||| || ||||||||||| |||||||| || || |||||| ||||||||| Sbjct: 425 tttctgattctcaaaggattaaatataccattgagaccttcaccaagggcatccctgatg 484 Query: 454 cacggacttacttgaatacccttcaggagatcagaataaagagtggccttgttgatgatc 513 ||||||||||||||||||| ||||| || |||||||||||||||| ||| | ||| || Sbjct: 485 cacggacttacttgaatactcttcaacagctcagaataaagagtggtcttatagatcata 544 Query: 514 ttggtgctgaggctatgatgatggaagctcttgagaaagttgagaaggacattaagaagc 573 |||| || || |||||||||||||||||||||| |||||||||| |||||||| | Sbjct: 545 ttggaatcgaacctttgatgatggaagctcttgagaagattgagaaggatattaagaaac 604 Query: 574 cactcctgaggagtgacaagaataatatgggtctcctcttggcagaatttgagaagataa 633 |||| | |||||||||||||| || |||| ||| ||||||| ||||| ||||| | Sbjct: 605 cacttttaaggagtgacaagaagaacatggccacccttatggcagagtttgacaagatta 664 Query: 634 acaaaaagcttggcattcggaaggaggatcttcccaagattgaggaagagcttgaactgc 693 || |||||||||||||||||||||||||||||| ||||| ||| |||| |||||| || Sbjct: 665 acgcaaagcttggcattcggaaggaggatcttcctaagatcgagaaagaacttgaattgg 724 Query: 694 aaattgcgaaaggtgagctgacggaacttaagaaggattgtattgaagcaatggagaccc 753 | ||||| ||| |||||||||| |||||||||||||| ||| |||| ||||||||||| | Sbjct: 725 agattgccaaaagtgagctgactgaacttaagaaggaatgtgttgaggcaatggagactc 784 Query: 754 aactaaagagggaggagtttaaagatgaagagatgcctgatgtcaggaaattggacatca 813 |||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 785 aactcaagagggaggagttccaagatgaggagatgcctgatgtcaggaaactggacatcc 844 Query: 814 gaaacttcctgtaggcctgatcgacgataa 843 |||||||||||||||||||||||||||||| Sbjct: 845 gaaacttcctgtaggcctgatcgacgataa 874 >gb|AY614716.1| Triticum aestivum mitochondrial ATP synthase precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 717 Score = 626 bits (316), Expect = e-176 Identities = 532/604 (88%) Strand = Plus / Plus Query: 220 ctcctgtcagcggagatgacttattgaagggcatattttttgaggtaaagaagaaatttg 279 |||||||||||||||| ||| || |||||||||| ||||||||||| ||||| || |||| Sbjct: 110 ctcctgtcagcggagacgacctactgaagggcatcttttttgaggtgaagaaaaagtttg 169 Query: 280 agacagcacttggggtccttaagaaggaaaaggtaacaattgatccggatgacccagcag 339 |||| |||||||| |||||||||||||| ||| | || ||||| || ||||||||| ||| Sbjct: 170 agaccgcacttggagtccttaagaaggagaagatcacgattgacccagatgacccaacag 229 Query: 340 cagttgctcgttatgcccaagtcatgaagactgtaagagaaaaggcagatcttctttctg 399 |||||||| |||||||||||||||| |||||||||||||||||||||||||||| | Sbjct: 230 cagttgctaactatgcccaagtcatgaggactgtaagagaaaaggcagatcttcttaacg 289 Query: 400 actctcagagaattaaatatactattgagacttttacgaagggcgtccctgatgcacgga 459 | |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| Sbjct: 290 attctcagagaattaaatatactattgagactttcacgaagggcatccctgatgcaagga 349 Query: 460 cttacttgaatacccttcaggagatcagaataaagagtggccttgttgatgatcttggtg 519 | |||||| ||||||||||| | |||| | ||||||||| ||| | |||||| | ||| Sbjct: 350 cgtacttggatacccttcagcaactcaggaaaaagagtggacttatagatgatatgggta 409 Query: 520 ctgaggctatgatgatggaagctcttgagaaagttgagaaggacattaagaagccactcc 579 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 410 ttgaggatatgatgatggaagctctcgagaaagttgagaaggacattaagaagcctcttc 469 Query: 580 tgaggagtgacaagaataatatgggtctcctcttggcagaatttgagaagataaacaaaa 639 |||||||||||||||| || ||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 470 tgaggagtgacaagaagaacatgaatctcctcttggcagagtttgacaagataaacaaaa 529 Query: 640 agcttggcattcggaaggaggatcttcccaagattgaggaagagcttgaactgcaaattg 699 |||||||||||||||||||||||||||||||||||||||| | |||||| || || ||| Sbjct: 530 agcttggcattcggaaggaggatcttcccaagattgaggagaatcttgaaatggaacttg 589 Query: 700 cgaaaggtgagctgacggaacttaagaaggattgtattgaagcaatggagacccaactaa 759 | |||| ||||||||||||||| |||||||| | |||||||||||||| ||||||| Sbjct: 590 ccaaagctgagctgacggaactcaagaaggaagttgttgaagcaatggagggtcaactaa 649 Query: 760 agagggaggagtttaaagatgaagagatgcctgatgtcaggaaattggacatcagaaact 819 |||||||||||||||||||||| | ||||||||| |||||||| |||||||| ||||||| Sbjct: 650 agagggaggagtttaaagatgaggggatgcctgacgtcaggaagttggacattagaaact 709 Query: 820 tcct 823 |||| Sbjct: 710 tcct 713 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 96 atggcgttggccgctcgcctcgtctcccgctcccgtcagctatattctgctcaagctgct 155 |||||| | |||||||||||||| ||||||||||| ||| ||||||||| ||||||||| Sbjct: 1 atggcgctcgccgctcgcctcgtatcccgctcccgccagttatattctgtccaagctgct 60 Query: 156 ttggcaaatggaggtgtcactcaagtccgctcgtatgccaaggatgcagctcc 208 ||||| ||||||||| |||||||||||||||| | ||||||||| |||||||| Sbjct: 61 ttggccaatggaggtctcactcaagtccgctcatttgccaaggaggcagctcc 113