BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010c09 (874 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058822.1| Oryza sativa (japonica cultivar-group) Os04g... 704 0.0 dbj|AK105031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 704 0.0 gb|AY111621.1| Zea mays CL36164_1 mRNA sequence 307 4e-80 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 194 4e-46 emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4,... 194 4e-46 >ref|NM_001058822.1| Oryza sativa (japonica cultivar-group) Os04g0228000 (Os04g0228000) mRNA, complete cds Length = 1957 Score = 704 bits (355), Expect = 0.0 Identities = 714/831 (85%), Gaps = 7/831 (0%) Strand = Plus / Plus Query: 1 ggcagctcggaccaagaggagacaccacttgatatcaaccagcaacatcccacatacact 60 |||||||| || ||||||||||||||||| ||| | |||| |||||||| ||||| || Sbjct: 1057 ggcagctcagatcaagaggagacaccactagatgttaacccacaacatcctacatatacg 1116 Query: 61 atcaccatcactgggattactgttggtaacaacc-cactggacttggagtttagtactat 119 |||| ||||| || |||||| ||||| || | || ||| ||||||||| ||||||||||| Sbjct: 1117 atcagcatcagtgagattacagttggaaatagcctcac-ggacttggaatttagtactat 1175 Query: 120 tttcgacacaggaacgtccttcacatacttggcagacccagcttacacatatataacaca 179 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1176 tttcgacacaggaacgtcgttcacatacttggcagacccagcttatacatatataacaca 1235 Query: 180 gagttttcatacacaagttcgagcaaatcgccattctgctgactcaagaattccttttga 239 |||||| || ||||||||| |||||||||||| | ||||||||||||||||||||||| Sbjct: 1236 gagtttccacgcacaagttcatgcaaatcgccatgccgctgactcaagaattccttttga 1295 Query: 240 atattgctacgatctgagctccggtgaggcaaggatccaaactcctggtataagtctgag 299 ||||||||| |||||||||||| |||| | ||||| ||||||||| |||||||| |||| Sbjct: 1296 atattgctatgatctgagctccagtgaagataggattcaaactcctagtataagtttgag 1355 Query: 300 aacagtaggtggaagtttgttcccagttattgatccagggcagataatctccattcagca 359 |||||| ||||||||| | || || ||||||||| ||||||| | |||||||||||||| Sbjct: 1356 aacagtgggtggaagtgtatttcccgttattgatgaagggcaggttatctccattcagca 1415 Query: 360 acatgagtatgtttattgcttggcaattgtcaagagcacgaaactgaatataattggaca 419 |||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| || Sbjct: 1416 acatgagtatgtttattgcttggcgattgtcaagagtgcaaaactcaatataattgggca 1475 Query: 420 aaatttcatgactggtcttcgtgttatttttgatcgagaaaggaaaatacttggttggaa 479 ||||||||||||||||||||||||| | || ||||||||||||||||| ||||||||||| Sbjct: 1476 aaatttcatgactggtcttcgtgttgtgttcgatcgagaaaggaaaattcttggttggaa 1535 Query: 480 gaaattcaattgctatgacattgatagttcaaaccctctctctattaactcacggaattc 539 |||||||||||| ||||||| |||||||||||| ||||| ||||| || ||||||||||| Sbjct: 1536 gaaattcaattgttatgacactgatagttcaaatcctctttctatcaattcacggaattc 1595 Query: 540 gtcaggcttctcccattcaacacctgagaattactctcctgaggaaacaaggggtgggaa 599 ||||| ||||||| |||| |||||||||||||||| || |||||||||| ||||||||| Sbjct: 1596 ttcaggtttctccccttcagcacctgagaattactcccccgaggaaacaaagggtgggaa 1655 Query: 600 cccagccggtgttacccagttgagaccccttagcagttcctctcctgtaatatggtataa 659 |||||| | ||||| ||||||||||||||||| | |||| || ||||| |||||| | Sbjct: 1656 cccagcaagcgttacacagttgagaccccttagtaattccaacccagtaatgtggtatga 1715 Query: 660 tattttagtattggtttttctttttgtccatttagccatcatgctctgatcctcttataa 719 || |||||| || |||||||| ||| |||| ||| |||||||||||||| ||| Sbjct: 1716 tagtttagtcttcaggtttcttttggtcaatttggcc-----gctctgatcctcttctaa 1770 Query: 720 ttggttttgggacgacccggttgtaaattagttctcactgttaccatagatacactaggg 779 || |||| |||| |||| | |||||||||||| |||| |||| ||||| |||||| Sbjct: 1771 tttgtttcgggatgacctgaatgtaaattagttatcacgattactgtagatgcactagaa 1830 Query: 780 gctgactaggtagtacagcatagataacagtactgtttacacatcctgtaa 830 ||||||||| | |||| |||||| ||||||||||| ||||| |||||||| Sbjct: 1831 gctgactagagaatacaacatagagaacagtactgtatacacgtcctgtaa 1881 >dbj|AK105031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A07, full insert sequence Length = 1960 Score = 704 bits (355), Expect = 0.0 Identities = 714/831 (85%), Gaps = 7/831 (0%) Strand = Plus / Plus Query: 1 ggcagctcggaccaagaggagacaccacttgatatcaaccagcaacatcccacatacact 60 |||||||| || ||||||||||||||||| ||| | |||| |||||||| ||||| || Sbjct: 1060 ggcagctcagatcaagaggagacaccactagatgttaacccacaacatcctacatatacg 1119 Query: 61 atcaccatcactgggattactgttggtaacaacc-cactggacttggagtttagtactat 119 |||| ||||| || |||||| ||||| || | || ||| ||||||||| ||||||||||| Sbjct: 1120 atcagcatcagtgagattacagttggaaatagcctcac-ggacttggaatttagtactat 1178 Query: 120 tttcgacacaggaacgtccttcacatacttggcagacccagcttacacatatataacaca 179 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1179 tttcgacacaggaacgtcgttcacatacttggcagacccagcttatacatatataacaca 1238 Query: 180 gagttttcatacacaagttcgagcaaatcgccattctgctgactcaagaattccttttga 239 |||||| || ||||||||| |||||||||||| | ||||||||||||||||||||||| Sbjct: 1239 gagtttccacgcacaagttcatgcaaatcgccatgccgctgactcaagaattccttttga 1298 Query: 240 atattgctacgatctgagctccggtgaggcaaggatccaaactcctggtataagtctgag 299 ||||||||| |||||||||||| |||| | ||||| ||||||||| |||||||| |||| Sbjct: 1299 atattgctatgatctgagctccagtgaagataggattcaaactcctagtataagtttgag 1358 Query: 300 aacagtaggtggaagtttgttcccagttattgatccagggcagataatctccattcagca 359 |||||| ||||||||| | || || ||||||||| ||||||| | |||||||||||||| Sbjct: 1359 aacagtgggtggaagtgtatttcccgttattgatgaagggcaggttatctccattcagca 1418 Query: 360 acatgagtatgtttattgcttggcaattgtcaagagcacgaaactgaatataattggaca 419 |||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| || Sbjct: 1419 acatgagtatgtttattgcttggcgattgtcaagagtgcaaaactcaatataattgggca 1478 Query: 420 aaatttcatgactggtcttcgtgttatttttgatcgagaaaggaaaatacttggttggaa 479 ||||||||||||||||||||||||| | || ||||||||||||||||| ||||||||||| Sbjct: 1479 aaatttcatgactggtcttcgtgttgtgttcgatcgagaaaggaaaattcttggttggaa 1538 Query: 480 gaaattcaattgctatgacattgatagttcaaaccctctctctattaactcacggaattc 539 |||||||||||| ||||||| |||||||||||| ||||| ||||| || ||||||||||| Sbjct: 1539 gaaattcaattgttatgacactgatagttcaaatcctctttctatcaattcacggaattc 1598 Query: 540 gtcaggcttctcccattcaacacctgagaattactctcctgaggaaacaaggggtgggaa 599 ||||| ||||||| |||| |||||||||||||||| || |||||||||| ||||||||| Sbjct: 1599 ttcaggtttctccccttcagcacctgagaattactcccccgaggaaacaaagggtgggaa 1658 Query: 600 cccagccggtgttacccagttgagaccccttagcagttcctctcctgtaatatggtataa 659 |||||| | ||||| ||||||||||||||||| | |||| || ||||| |||||| | Sbjct: 1659 cccagcaagcgttacacagttgagaccccttagtaattccaacccagtaatgtggtatga 1718 Query: 660 tattttagtattggtttttctttttgtccatttagccatcatgctctgatcctcttataa 719 || |||||| || |||||||| ||| |||| ||| |||||||||||||| ||| Sbjct: 1719 tagtttagtcttcaggtttcttttggtcaatttggcc-----gctctgatcctcttctaa 1773 Query: 720 ttggttttgggacgacccggttgtaaattagttctcactgttaccatagatacactaggg 779 || |||| |||| |||| | |||||||||||| |||| |||| ||||| |||||| Sbjct: 1774 tttgtttcgggatgacctgaatgtaaattagttatcacgattactgtagatgcactagaa 1833 Query: 780 gctgactaggtagtacagcatagataacagtactgtttacacatcctgtaa 830 ||||||||| | |||| |||||| ||||||||||| ||||| |||||||| Sbjct: 1834 gctgactagagaatacaacatagagaacagtactgtatacacgtcctgtaa 1884 >gb|AY111621.1| Zea mays CL36164_1 mRNA sequence Length = 1001 Score = 307 bits (155), Expect = 4e-80 Identities = 403/488 (82%) Strand = Plus / Minus Query: 4 agctcggaccaagaggagacaccacttgatatcaaccagcaacatcccacatacactatc 63 ||||| |||||||| |||||||| ||||| ||||||| ||||||||||||||| | ||| Sbjct: 881 agctcagaccaagaagagacacctcttgacatcaaccgacaacatcccacatacgccatc 822 Query: 64 accatcactgggattactgttggtaacaacccactggacttggagtttagtactattttc 123 || || | | |||||||| ||| || || ||| |||| |||| || | ||||| Sbjct: 821 actataagcgtgattactgatggaaataaaccaacggacatggacttcattactannnnn 762 Query: 124 gacacaggaacgtccttcacatacttggcagacccagcttacacatatataacacagagt 183 ||||| || || || ||||||||||||||||||||||| | || |||||||| |||||| Sbjct: 761 gacactggtacttctttcacatacttggcagacccagcggatacttatataacccagagt 702 Query: 184 tttcatacacaagttcgagcaaatcgccattctgctgactcaagaattccttttgaatat 243 |||||| | ||||||| ||||||||| ||| |||| ||||| || ||||||||||||||| Sbjct: 701 tttcatgcgcaagttcaagcaaatcgncatgctgccgactccaggattccttttgaatat 642 Query: 244 tgctacgatctgagctccggtgaggcaaggatccaaactcctggtataagtctgagaaca 303 || || ||| ||||||| |||| ||||| | | || ||||| ||||| || |||||| Sbjct: 641 tgntatgatttgagctctagtgaagcaagatttccaattcctgatataatcctaagaaca 582 Query: 304 gtaggtggaagtttgttcccagttattgatccagggcagataatctccattcagcaacat 363 || ||||||| |||| || ||||||||||||||||| | |||||||||||| ||||| Sbjct: 581 gttactggaagtatgtttcctgttattgatccagggcaagttatctccattcaggaacat 522 Query: 364 gagtatgtttattgcttggcaattgtcaagagcacgaaactgaatataattggacaaaat 423 |||||||| |||||| ||||||| |||||||||| ||| || || || |||||||||||| Sbjct: 521 gagtatgtgtattgcctggcaatcgtcaagagcatgaagctcaacattattggacaaaat 462 Query: 424 ttcatgactggtcttcgtgttatttttgatcgagaaaggaaaatacttggttggaagaaa 483 ||||||||||||||||||||| | || ||||| ||||||||||| ||||| ||||||||| Sbjct: 461 ttcatgactggtcttcgtgttgtgttcgatcgggaaaggaaaattcttggatggaagaaa 402 Query: 484 ttcaattg 491 || ||||| Sbjct: 401 tttaattg 394 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 194 bits (98), Expect = 4e-46 Identities = 278/338 (82%), Gaps = 5/338 (1%) Strand = Plus / Plus Query: 493 tatgacattgatagttcaaaccctctctctattaactcacggaattcgtcaggcttctcc 552 ||||||| |||||||||||| ||||| ||||| || ||||||||||| ||||| |||||| Sbjct: 8543185 tatgacactgatagttcaaatcctctttctatcaattcacggaattcttcaggtttctcc 8543244 Query: 553 cattcaacacctgagaattactctcctgaggaaacaaggggtgggaacccagccggtgtt 612 | |||| |||||||||||||||| || |||||||||| ||||||||||||||| | ||| Sbjct: 8543245 ccttcagcacctgagaattactcccccgaggaaacaaagggtgggaacccagcaagcgtt 8543304 Query: 613 acccagttgagaccccttagcagttcctctcctgtaatatggtataatattttagtattg 672 || ||||||||||||||||| | |||| || ||||| |||||| ||| |||||| || Sbjct: 8543305 acacagttgagaccccttagtaattccaacccagtaatgtggtatgatagtttagtcttc 8543364 Query: 673 gtttttctttttgtccatttagccatcatgctctgatcctcttataattggttttgggac 732 |||||||| ||| |||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 8543365 aggtttcttttggtcaatttggcc-----gctctgatcctcttctaatttgtttcgggat 8543419 Query: 733 gacccggttgtaaattagttctcactgttaccatagatacactaggggctgactaggtag 792 |||| | |||||||||||| |||| |||| ||||| |||||| ||||||||| | Sbjct: 8543420 gacctgaatgtaaattagttatcacgattactgtagatgcactagaagctgactagagaa 8543479 Query: 793 tacagcatagataacagtactgtttacacatcctgtaa 830 |||| |||||| ||||||||||| ||||| |||||||| Sbjct: 8543480 tacaacatagagaacagtactgtatacacgtcctgtaa 8543517 Score = 145 bits (73), Expect = 3e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 99 ggacttggagtttagtactattttcgacacaggaacgtccttcacatacttggcagaccc 158 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 8541192 ggacttggaatttagtactattttcgacacaggaacgtcgttcacatacttggcagaccc 8541251 Query: 159 agcttacacatatataacacagagt 183 |||||| |||||||||||||||||| Sbjct: 8541252 agcttatacatatataacacagagt 8541276 Score = 113 bits (57), Expect = 1e-21 Identities = 69/73 (94%) Strand = Plus / Plus Query: 419 aaaatttcatgactggtcttcgtgttatttttgatcgagaaaggaaaatacttggttgga 478 |||||||||||||||||||||||||| | || ||||||||||||||||| |||||||||| Sbjct: 8543029 aaaatttcatgactggtcttcgtgttgtgttcgatcgagaaaggaaaattcttggttgga 8543088 Query: 479 agaaattcaattg 491 ||||||||||||| Sbjct: 8543089 agaaattcaattg 8543101 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 191 cacaagttcgagcaaatcgccattctgctgactcaagaattccttttgaatattgctacg 250 ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| | Sbjct: 8541360 cacaagttcatgcaaatcgccatgccgctgactcaagaattccttttgaatattgctatg 8541419 Query: 251 atctgag 257 ||||||| Sbjct: 8541420 atctgag 8541426 Score = 83.8 bits (42), Expect = 1e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 355 cagcaacatgagtatgtttattgcttggcaattgtcaagagcacgaaactgaatataatt 414 ||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||| Sbjct: 8541700 cagcaacatgagtatgtttattgcttggcgattgtcaagagtgcaaaactcaatataatt 8541759 Query: 415 gg 416 || Sbjct: 8541760 gg 8541761 Score = 77.8 bits (39), Expect = 7e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 271 aggatccaaactcctggtataagtctgagaacagtaggtggaagtttgttcccagttatt 330 ||||| ||||||||| |||||||| |||||||||| ||||||||| | || || |||||| Sbjct: 8541533 aggattcaaactcctagtataagtttgagaacagtgggtggaagtgtatttcccgttatt 8541592 Query: 331 gatccagggcagataatctccattcag 357 ||| ||||||| | |||||||||||| Sbjct: 8541593 gatgaagggcaggttatctccattcag 8541619 >emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0071D01, complete sequence Length = 78794 Score = 194 bits (98), Expect = 4e-46 Identities = 278/338 (82%), Gaps = 5/338 (1%) Strand = Plus / Plus Query: 493 tatgacattgatagttcaaaccctctctctattaactcacggaattcgtcaggcttctcc 552 ||||||| |||||||||||| ||||| ||||| || ||||||||||| ||||| |||||| Sbjct: 75754 tatgacactgatagttcaaatcctctttctatcaattcacggaattcttcaggtttctcc 75813 Query: 553 cattcaacacctgagaattactctcctgaggaaacaaggggtgggaacccagccggtgtt 612 | |||| |||||||||||||||| || |||||||||| ||||||||||||||| | ||| Sbjct: 75814 ccttcagcacctgagaattactcccccgaggaaacaaagggtgggaacccagcaagcgtt 75873 Query: 613 acccagttgagaccccttagcagttcctctcctgtaatatggtataatattttagtattg 672 || ||||||||||||||||| | |||| || ||||| |||||| ||| |||||| || Sbjct: 75874 acacagttgagaccccttagtaattccaacccagtaatgtggtatgatagtttagtcttc 75933 Query: 673 gtttttctttttgtccatttagccatcatgctctgatcctcttataattggttttgggac 732 |||||||| ||| |||| ||| |||||||||||||| ||||| |||| |||| Sbjct: 75934 aggtttcttttggtcaatttggcc-----gctctgatcctcttctaatttgtttcgggat 75988 Query: 733 gacccggttgtaaattagttctcactgttaccatagatacactaggggctgactaggtag 792 |||| | |||||||||||| |||| |||| ||||| |||||| ||||||||| | Sbjct: 75989 gacctgaatgtaaattagttatcacgattactgtagatgcactagaagctgactagagaa 76048 Query: 793 tacagcatagataacagtactgtttacacatcctgtaa 830 |||| |||||| ||||||||||| ||||| |||||||| Sbjct: 76049 tacaacatagagaacagtactgtatacacgtcctgtaa 76086 Score = 145 bits (73), Expect = 3e-31 Identities = 82/85 (96%) Strand = Plus / Plus Query: 99 ggacttggagtttagtactattttcgacacaggaacgtccttcacatacttggcagaccc 158 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 73761 ggacttggaatttagtactattttcgacacaggaacgtcgttcacatacttggcagaccc 73820 Query: 159 agcttacacatatataacacagagt 183 |||||| |||||||||||||||||| Sbjct: 73821 agcttatacatatataacacagagt 73845 Score = 113 bits (57), Expect = 1e-21 Identities = 69/73 (94%) Strand = Plus / Plus Query: 419 aaaatttcatgactggtcttcgtgttatttttgatcgagaaaggaaaatacttggttgga 478 |||||||||||||||||||||||||| | || ||||||||||||||||| |||||||||| Sbjct: 75598 aaaatttcatgactggtcttcgtgttgtgttcgatcgagaaaggaaaattcttggttgga 75657 Query: 479 agaaattcaattg 491 ||||||||||||| Sbjct: 75658 agaaattcaattg 75670 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 191 cacaagttcgagcaaatcgccattctgctgactcaagaattccttttgaatattgctacg 250 ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| | Sbjct: 73929 cacaagttcatgcaaatcgccatgccgctgactcaagaattccttttgaatattgctatg 73988 Query: 251 atctgag 257 ||||||| Sbjct: 73989 atctgag 73995 Score = 83.8 bits (42), Expect = 1e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 355 cagcaacatgagtatgtttattgcttggcaattgtcaagagcacgaaactgaatataatt 414 ||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||| Sbjct: 74269 cagcaacatgagtatgtttattgcttggcgattgtcaagagtgcaaaactcaatataatt 74328 Query: 415 gg 416 || Sbjct: 74329 gg 74330 Score = 77.8 bits (39), Expect = 7e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 271 aggatccaaactcctggtataagtctgagaacagtaggtggaagtttgttcccagttatt 330 ||||| ||||||||| |||||||| |||||||||| ||||||||| | || || |||||| Sbjct: 74102 aggattcaaactcctagtataagtttgagaacagtgggtggaagtgtatttcccgttatt 74161 Query: 331 gatccagggcagataatctccattcag 357 ||| ||||||| | |||||||||||| Sbjct: 74162 gatgaagggcaggttatctccattcag 74188