BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010a16 (1440 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK242273.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 704 0.0 emb|CT835030.1| Oryza sativa (indica cultivar-group) cDNA clone:... 696 0.0 ref|NM_001060686.1| Oryza sativa (japonica cultivar-group) Os04g... 696 0.0 gb|AY110222.1| Zea mays CL15947_1 mRNA sequence 357 8e-95 emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 246 2e-61 >dbj|AK242273.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075187C13, full insert sequence Length = 974 Score = 704 bits (355), Expect = 0.0 Identities = 490/535 (91%) Strand = Plus / Plus Query: 664 atggccacatcatcatcgtaccctccacctcctccatattaccgactttacaaggattac 723 ||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 178 atggccacatcatcagcatatcctccacctcctccatattaccgactatacaaggattac 237 Query: 724 gggcaggacccctcatctgcaccagatcctccaccaccaattgatggaccataccaactc 783 | |||| || ||||||||||| || |||||||| ||| ||||||||||||| |||||| Sbjct: 238 gaaaaggatccttcatctgcacctgaacctccaccgccagttgatggaccatatcaactc 297 Query: 784 tttggtgctacctacacaacagatgtggtgctgccaagcttggaggatcaaggtgttcgt 843 || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 298 ttcggtgctacctacacaacagatgtggtgctcccaagcttagaggatcaaggtgttcgt 357 Query: 844 cagctttatccgaagggcccaaatatcgacttcaaaaaggagctaaggaccctcaacaga 903 ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 358 cagctttatccgaagagcccagatatcgatttcaaaaaggagctaaggaccctgaacaga 417 Query: 904 gagcttcaactccatattttggagctagcagatattttagtggagagaccatctcagtat 963 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 418 gagcttcagctccatattttggagctagcagatattttagtggaaagaccatcacagtat 477 Query: 964 gctcgcagggtagaagatatttcactcattttcaagaacttgcatcatcttcttaattcc 1023 ||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 478 gctcgtagggtagaggatatttcactcattttcaagaacttgcaccaccttcttaattcc 537 Query: 1024 ctacgccctcaccaggcaagagcccccttgattcacatgcttgagagccaaatacagcgg 1083 |||| |||||||| || |||||| | |||||||||||||||||| |||||| ||||| Sbjct: 538 ttacgacctcaccaagccagagccactctgattcacatgcttgagaaccaaattcagcgt 597 Query: 1084 cgtaagcaagcaattgaagatataaaacagaggagagaggaggcgcagaagctacttggg 1143 || || |||||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 598 cggaaacaagcaattgaagatataaagcagaggagagaggaggcacaaaagctacttggg 657 Query: 1144 gaatcactgcttattttagatggaaaccagccgagtttgcctgcaatgtgaagac 1198 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gaatcactgctaatcttagatggaaaccagccgagtttgcctgcaatgtgaagac 712 >emb|CT835030.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102G02, full insert sequence Length = 931 Score = 696 bits (351), Expect = 0.0 Identities = 489/535 (91%) Strand = Plus / Plus Query: 664 atggccacatcatcatcgtaccctccacctcctccatattaccgactttacaaggattac 723 ||||||||||| ||| | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 123 atggccacatcgtcagcatatcctccacctcctccatattaccgactatacaaggattac 182 Query: 724 gggcaggacccctcatctgcaccagatcctccaccaccaattgatggaccataccaactc 783 | |||| || ||||||||||| || |||||||| ||| ||||||||||||| |||||| Sbjct: 183 gaaaaggatccttcatctgcacctgaacctccaccgccagttgatggaccatatcaactc 242 Query: 784 tttggtgctacctacacaacagatgtggtgctgccaagcttggaggatcaaggtgttcgt 843 || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 243 ttcggtgctacctacacaacagatgtggtgctcccaagcttagaggatcaaggtgttcgt 302 Query: 844 cagctttatccgaagggcccaaatatcgacttcaaaaaggagctaaggaccctcaacaga 903 ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 303 cagctttatccgaagagcccagatatcgatttcaaaaaggagctaaggaccctgaacaga 362 Query: 904 gagcttcaactccatattttggagctagcagatattttagtggagagaccatctcagtat 963 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 363 gagcttcagctccatattttggagctagcagatattttagtggaaagaccatcacagtat 422 Query: 964 gctcgcagggtagaagatatttcactcattttcaagaacttgcatcatcttcttaattcc 1023 ||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 423 gctcgtagggtagaggatatttcactcattttcaagaacttgcaccaccttcttaattcc 482 Query: 1024 ctacgccctcaccaggcaagagcccccttgattcacatgcttgagagccaaatacagcgg 1083 |||| |||||||| || |||||| | |||||||||||||||||| |||||| ||||| Sbjct: 483 ttacgacctcaccaagccagagccactctgattcacatgcttgagaaccaaattcagcgt 542 Query: 1084 cgtaagcaagcaattgaagatataaaacagaggagagaggaggcgcagaagctacttggg 1143 || || |||||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 543 cggaaacaagcaattgaagatataaagcagaggagagaggaggcacaaaagctacttggg 602 Query: 1144 gaatcactgcttattttagatggaaaccagccgagtttgcctgcaatgtgaagac 1198 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 603 gaatcactgctaatcttagatggaaaccagccgagtttgcctgcaatgtgaagac 657 >ref|NM_001060686.1| Oryza sativa (japonica cultivar-group) Os04g0661800 (Os04g0661800) mRNA, complete cds Length = 531 Score = 696 bits (351), Expect = 0.0 Identities = 486/531 (91%) Strand = Plus / Plus Query: 664 atggccacatcatcatcgtaccctccacctcctccatattaccgactttacaaggattac 723 ||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 1 atggccacatcatcagcatatcctccacctcctccatattaccgactatacaaggattac 60 Query: 724 gggcaggacccctcatctgcaccagatcctccaccaccaattgatggaccataccaactc 783 | |||| || ||||||||||| || |||||||| ||| ||||||||||||| |||||| Sbjct: 61 gaaaaggatccttcatctgcacctgaacctccaccgccagttgatggaccatatcaactc 120 Query: 784 tttggtgctacctacacaacagatgtggtgctgccaagcttggaggatcaaggtgttcgt 843 || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 121 ttcggtgctacctacacaacagatgtggtgctcccaagcttagaggatcaaggtgttcgt 180 Query: 844 cagctttatccgaagggcccaaatatcgacttcaaaaaggagctaaggaccctcaacaga 903 ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 181 cagctttatccgaagagcccagatatcgatttcaaaaaggagctaaggaccctgaacaga 240 Query: 904 gagcttcaactccatattttggagctagcagatattttagtggagagaccatctcagtat 963 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 241 gagcttcagctccatattttggagctagcagatattttagtggaaagaccatcacagtat 300 Query: 964 gctcgcagggtagaagatatttcactcattttcaagaacttgcatcatcttcttaattcc 1023 ||||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 301 gctcgtagggtagaggatatttcactcattttcaagaacttgcaccaccttcttaattcc 360 Query: 1024 ctacgccctcaccaggcaagagcccccttgattcacatgcttgagagccaaatacagcgg 1083 |||| |||||||| || |||||| | |||||||||||||||||| |||||| ||||| Sbjct: 361 ttacgacctcaccaagccagagccactctgattcacatgcttgagaaccaaattcagcgt 420 Query: 1084 cgtaagcaagcaattgaagatataaaacagaggagagaggaggcgcagaagctacttggg 1143 || || |||||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct: 421 cggaaacaagcaattgaagatataaagcagaggagagaggaggcacaaaagctacttggg 480 Query: 1144 gaatcactgcttattttagatggaaaccagccgagtttgcctgcaatgtga 1194 ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 481 gaatcactgctaatcttagatggaaaccagccgagtttgcctgcaatgtga 531 >gb|AY110222.1| Zea mays CL15947_1 mRNA sequence Length = 962 Score = 357 bits (180), Expect = 8e-95 Identities = 377/445 (84%) Strand = Plus / Minus Query: 661 gcaatggccacatcatcatcgtaccctccacctcctccatattaccgactttacaaggat 720 ||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| Sbjct: 850 gcaatggccacatcagcatcgtaccctccacctcctccattttaccgattgtacnnnnnn 791 Query: 721 tacgggcaggacccctcatctgcaccagatcctccaccaccaattgatggaccataccaa 780 | ||| || ||||||||||||||||| ||||||||||||||||||| ||||| | || Sbjct: 790 nttgagcaagatccctcatctgcaccagaacctccaccaccaattgatgaaccattcaaa 731 Query: 781 ctctttggtgctacctacacaacagatgtggtgctgccaagcttggaggatcaaggtgtt 840 ||| |||| | |||||| |||||| ||| | |||||||||||| ||| ||| Sbjct: 730 gccttgggtgttgattacacaggagatgttgtgattccaagcttggagagtcataatgtc 671 Query: 841 cgtcagctttatccgaagggcccaaatatcgacttcaaaaaggagctaaggaccctcaac 900 |||||||||||||| ||||| || ||||| |||||||| |||||||| |||||||||||| Sbjct: 670 cgtcagctttatccaaagggtcccaatattgacttcaagaaggagcttaggaccctcaac 611 Query: 901 agagagcttcaactccatattttggagctagcagatattttagtggagagaccatctcag 960 |||||||||||| | |||||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 610 agagagcttcaattgcatattttggagctggcagatatattagttgagagaccatctcaa 551 Query: 961 tatgctcgcagggtagaagatatttcactcattttcaagaacttgcatcatcttcttaat 1020 |||||||| ||||||||||||||| | ||||| ||||||||||| ||||||||||| ||| Sbjct: 550 tatgctcgtagggtagaagatattacgctcatattcaagaacttacatcatcttctcaat 491 Query: 1021 tccctacgccctcaccaggcaagagcccccttgattcacatgcttgagagccaaatacag 1080 ||| |||| ||||| |||||||| ||| | |||||||||||||||||||||||||| | | Sbjct: 490 tccttacgacctcatcaggcaagggccacattgattcacatgcttgagagccaaattcgg 431 Query: 1081 cggcgtaagcaagcaattgaagata 1105 | || ||| ||||||||||||||| Sbjct: 430 caccgcaaggaagcaattgaagata 406 >emb|CR855168.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0112G12, complete sequence Length = 103646 Score = 246 bits (124), Expect = 2e-61 Identities = 154/164 (93%) Strand = Plus / Minus Query: 874 ttcaaaaaggagctaaggaccctcaacagagagcttcaactccatattttggagctagca 933 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 101046 ttcaaaaaggagctaaggaccctgaacagagagcttcagctccatattttggagctagca 100987 Query: 934 gatattttagtggagagaccatctcagtatgctcgcagggtagaagatatttcactcatt 993 |||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 100986 gatattttagtggaaagaccatcacagtatgctcgtagggtagaggatatttcactcatt 100927 Query: 994 ttcaagaacttgcatcatcttcttaattccctacgccctcacca 1037 |||||||||||||| || |||||||||||| |||| |||||||| Sbjct: 100926 ttcaagaacttgcaccaccttcttaattccttacgacctcacca 100883 Score = 147 bits (74), Expect = 1e-31 Identities = 122/138 (88%) Strand = Plus / Minus Query: 664 atggccacatcatcatcgtaccctccacctcctccatattaccgactttacaaggattac 723 ||||||||||| ||| | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 101535 atggccacatcgtcagcatatcctccacctcctccatattaccgactatacaaggattac 101476 Query: 724 gggcaggacccctcatctgcaccagatcctccaccaccaattgatggaccataccaactc 783 | |||| || ||||||||||| || |||||||| ||| ||||||||||||| |||||| Sbjct: 101475 gaaaaggatccttcatctgcacctgaacctccaccgccagttgatggaccatatcaactc 101416 Query: 784 tttggtgctacctacaca 801 || ||||||||||||||| Sbjct: 101415 ttcggtgctacctacaca 101398 Score = 139 bits (70), Expect = 4e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 1113 gaggagagaggaggcgcagaagctacttggggaatcactgcttattttagatggaaacca 1172 ||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||| Sbjct: 100442 gaggagagaggaggcacaaaagctacttggggaatcactgctaatcttagatggaaacca 100383 Query: 1173 gccgagtttgcctgcaatgtgaagac 1198 |||||||||||||||||||||||||| Sbjct: 100382 gccgagtttgcctgcaatgtgaagac 100357 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Minus Query: 802 acagatgtggtgctgccaagcttggaggatcaaggtgttcgtcagctttatccgaagggc 861 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 101315 acagatgtggtgctcccaagcttagaggatcaaggtgttcgtcagctttatccgaagagc 101256 Query: 862 ccaaatatcg 871 ||| |||||| Sbjct: 101255 ccagatatcg 101246