BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst010a03 (767 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056145.1| Oryza sativa (japonica cultivar-group) Os03g... 392 e-106 dbj|AK107381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome... 216 1e-52 gb|AY108638.1| Zea mays PCO144854 mRNA sequence 210 6e-51 >ref|NM_001056145.1| Oryza sativa (japonica cultivar-group) Os03g0259100 (Os03g0259100) mRNA, complete cds Length = 733 Score = 392 bits (198), Expect = e-106 Identities = 326/368 (88%), Gaps = 3/368 (0%) Strand = Plus / Plus Query: 97 atggctcagggaaggggcagtgcgacgcaggggctcgccctcgccttgctcgccctttgc 156 ||||| |||||||| |||||||| |||||||||||||||||| ||||||| | | ||| Sbjct: 81 atggcccagggaagaggcagtgcagcgcaggggctcgccctcggcttgctcctcgtgtgc 140 Query: 157 cttctcctcggcgccgccgacatcgccggcgccgccacctacaacgtcgactggtcgttc 216 ||||||| || | ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 141 ---ctcctcgtcggctccgacgtcgccgccgccgccacctacaacgtcgactggtcgttc 197 Query: 217 ggcgcggacagttggtccaagggcaagaacttccgcgccggagacgtcctcgtgttcagc 276 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 198 ggcgcggacagctggtccaagggcaagaacttccgcgccggtgacgtccttgtgttcagc 257 Query: 277 tacagcccgtccgtgcataacgtggtggcggtggacgccagcggctactacggctgccgg 336 ||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||| Sbjct: 258 tacgacccgtccgtgcacaacgtggtggcggtggacgccggcggctacagcggctgccgg 317 Query: 337 ggctccggcacgacgtacagctcggggaacgaccgcgtcacgctcggcgccggcacgacc 396 | |||||||| | ||||||||| |||||||||||| ||||||||||| |||||||| | Sbjct: 318 gagtccggcaccaagtacagctccgggaacgaccgcatcacgctcggccgcggcacgagc 377 Query: 397 tacttcatctgctccctctccggccactgtggagcagggatgaagatggccgtctcggcc 456 |||||||||||| | |||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 378 tacttcatctgcagcttctccggccactgtggcgcagggatgaagatggccgtcaccgcc 437 Query: 457 aactgaag 464 | |||||| Sbjct: 438 agctgaag 445 >dbj|AK107381.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C02, full insert sequence Length = 733 Score = 385 bits (194), Expect = e-103 Identities = 325/368 (88%), Gaps = 3/368 (0%) Strand = Plus / Plus Query: 97 atggctcagggaaggggcagtgcgacgcaggggctcgccctcgccttgctcgccctttgc 156 ||||| |||||||| |||||||| |||||||||||||||||| ||||||| | | ||| Sbjct: 81 atggcccagggaagaggcagtgcagcgcaggggctcgccctcggcttgctcctcgtgtgc 140 Query: 157 cttctcctcggcgccgccgacatcgccggcgccgccacctacaacgtcgactggtcgttc 216 ||||||| || | ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 141 ---ctcctcgtcggctccgacgtcgccgccgccgccacctacaacgtcgactggtcgttc 197 Query: 217 ggcgcggacagttggtccaagggcaagaacttccgcgccggagacgtcctcgtgttcagc 276 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 198 ggcgcggacagctggtccaagggcaagaacttccgcgccggtgacgtccttgtgttcagc 257 Query: 277 tacagcccgtccgtgcataacgtggtggcggtggacgccagcggctactacggctgccgg 336 ||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||| Sbjct: 258 tacgacccgtccgtgcacaacgtggtggcggtggacgccggcggctacagcggctgccgg 317 Query: 337 ggctccggcacgacgtacagctcggggaacgaccgcgtcacgctcggcgccggcacgacc 396 | |||||||| | ||||||||| ||| |||||||| ||||||||||| |||||||| | Sbjct: 318 gagtccggcaccaagtacagctccgggtacgaccgcatcacgctcggccgcggcacgagc 377 Query: 397 tacttcatctgctccctctccggccactgtggagcagggatgaagatggccgtctcggcc 456 |||||||||||| | |||||||||||||||| ||||||||||||||||||||| | ||| Sbjct: 378 tacttcatctgcagcttctccggccactgtggcgcagggatgaagatggccgtcaccgcc 437 Query: 457 aactgaag 464 | |||||| Sbjct: 438 agctgaag 445 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 216 bits (109), Expect = 1e-52 Identities = 175/197 (88%) Strand = Plus / Plus Query: 268 gtgttcagctacagcccgtccgtgcataacgtggtggcggtggacgccagcggctactac 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| | Sbjct: 8365696 gtgttcagctacgacccgtccgtgcacaacgtggtggcggtggacgccggcggctacagc 8365755 Query: 328 ggctgccggggctccggcacgacgtacagctcggggaacgaccgcgtcacgctcggcgcc 387 |||||||||| |||||||| | ||||||||| |||||||||||| ||||||||||| | Sbjct: 8365756 ggctgccgggagtccggcaccaagtacagctccgggaacgaccgcatcacgctcggccgc 8365815 Query: 388 ggcacgacctacttcatctgctccctctccggccactgtggagcagggatgaagatggcc 447 ||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 8365816 ggcacgagctacttcatctgcagcttctccggccactgtggcgcagggatgaagatggcc 8365875 Query: 448 gtctcggccaactgaag 464 ||| | |||| |||||| Sbjct: 8365876 gtcaccgccagctgaag 8365892 Score = 182 bits (92), Expect = 1e-42 Identities = 151/170 (88%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 97 atggctcagggaaggggcagtgcgacgcaggggctcgccctcgccttgctcgccctttgc 156 ||||| |||||||| |||||||| |||||||||||||||||| ||||||| | | ||| Sbjct: 8365419 atggcccagggaagaggcagtgcagcgcaggggctcgccctcggcttgctcctcgtgtgc 8365478 Query: 157 cttctcctcggcgccgccgacatcgccggcgccgccacctacaacgtcgactggtcgttc 216 ||||||| || | ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 8365479 ---ctcctcgtcggctccgacgtcgccgccgccgccacctacaacgtcgactggtcgttc 8365535 Query: 217 ggcgcggacagttggtccaagggcaagaacttccgcgccggagacgtcct 266 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 8365536 ggcgcggacagctggtccaagggcaagaacttccgcgccggtgacgtcct 8365585 >gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 216 bits (109), Expect = 1e-52 Identities = 175/197 (88%) Strand = Plus / Plus Query: 268 gtgttcagctacagcccgtccgtgcataacgtggtggcggtggacgccagcggctactac 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| | Sbjct: 105117 gtgttcagctacgacccgtccgtgcacaacgtggtggcggtggacgccggcggctacagc 105176 Query: 328 ggctgccggggctccggcacgacgtacagctcggggaacgaccgcgtcacgctcggcgcc 387 |||||||||| |||||||| | ||||||||| |||||||||||| ||||||||||| | Sbjct: 105177 ggctgccgggagtccggcaccaagtacagctccgggaacgaccgcatcacgctcggccgc 105236 Query: 388 ggcacgacctacttcatctgctccctctccggccactgtggagcagggatgaagatggcc 447 ||||||| ||||||||||||| | |||||||||||||||| |||||||||||||||||| Sbjct: 105237 ggcacgagctacttcatctgcagcttctccggccactgtggcgcagggatgaagatggcc 105296 Query: 448 gtctcggccaactgaag 464 ||| | |||| |||||| Sbjct: 105297 gtcaccgccagctgaag 105313 Score = 182 bits (92), Expect = 1e-42 Identities = 151/170 (88%), Gaps = 3/170 (1%) Strand = Plus / Plus Query: 97 atggctcagggaaggggcagtgcgacgcaggggctcgccctcgccttgctcgccctttgc 156 ||||| |||||||| |||||||| |||||||||||||||||| ||||||| | | ||| Sbjct: 104840 atggcccagggaagaggcagtgcagcgcaggggctcgccctcggcttgctcctcgtgtgc 104899 Query: 157 cttctcctcggcgccgccgacatcgccggcgccgccacctacaacgtcgactggtcgttc 216 ||||||| || | ||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 104900 ---ctcctcgtcggctccgacgtcgccgccgccgccacctacaacgtcgactggtcgttc 104956 Query: 217 ggcgcggacagttggtccaagggcaagaacttccgcgccggagacgtcct 266 ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 104957 ggcgcggacagctggtccaagggcaagaacttccgcgccggtgacgtcct 105006 >gb|AY108638.1| Zea mays PCO144854 mRNA sequence Length = 761 Score = 210 bits (106), Expect = 6e-51 Identities = 199/230 (86%) Strand = Plus / Plus Query: 179 tcgccggcgccgccacctacaacgtcgactggtcgttcggcgcggacagttggtccaagg 238 |||||| ||| |||||| ||| ||||||||||| ||| ||||||||| |||||||||| Sbjct: 182 tcgccgacgcggccacccacagggtcgactggtccttcaacgcggacagctggtccaagg 241 Query: 239 gcaagaacttccgcgccggagacgtcctcgtgttcagctacagcccgtccgtgcataacg 298 |||||| |||||| ||||| |||||||||| ||||| |||| ||| |||||||| |||| Sbjct: 242 gcaagagcttccgtgccggcgacgtcctcgagttcaactacgacccctccgtgcacaacg 301 Query: 299 tggtggcggtggacgccagcggctactacggctgccggggctccggcacgacgtacagct 358 ||||||| ||||||||| |||||||| ||||||||||| |||||||||| ||||| ||| Sbjct: 302 tggtggccgtggacgccggcggctacaacggctgccggccctccggcacgtcgtacggct 361 Query: 359 cggggaacgaccgcgtcacgctcggcgccggcacgacctacttcatctgc 408 | |||| ||||||| ||||||||||| ||||||| | ||||||||||||| Sbjct: 362 ccgggagcgaccgcatcacgctcggccccggcaccagctacttcatctgc 411