BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009p11 (820 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835188.1| Oryza sativa (indica cultivar-group) cDNA clone:... 547 e-152 ref|NM_001055976.1| Oryza sativa (japonica cultivar-group) Os03g... 541 e-150 gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 428 e-116 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 428 e-116 emb|CT835226.1| Oryza sativa (indica cultivar-group) cDNA clone:... 420 e-114 >emb|CT835188.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117I14, full insert sequence Length = 1195 Score = 547 bits (276), Expect = e-152 Identities = 474/540 (87%) Strand = Plus / Plus Query: 271 cctcccccgcgcgctcgccgcgggggcgctctcgccggcgtcgcgggtgctggccgtgac 330 |||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 310 cctcccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgac 369 Query: 331 gcccactgcgtccttcgtgggcgccctcctctctgagaccccctgcgagctgctggtagc 390 ||| | |||||||||||| |||||||||||| | | |||||||||||| ||||| || Sbjct: 370 ccccgcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggc 429 Query: 391 cgcgcacgagtcgctgtacgtgctggccgggatcaaggaggagcacgatgaggtgaggtg 450 |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 430 cgcgcacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtg 489 Query: 451 cttccatctggagggagggggagggggcaggggaggcggcgtggtggaggccgtgccgga 510 |||||| |||||||||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 490 cttccacttggagggaggcggaggcggcaggggaggcggagtggtggagggcgtgccgga 549 Query: 511 gaggtttgacgcgttcgacgcggtgttcgtgtgctacttccccgggatgggtgtctcggc 570 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 550 gaggttcgacgcgttcgacgccgtgttcgtctgctacttccccgggatgggtgtctcggc 609 Query: 571 cgcggcgctgctcgagtcgctggcgaagaggtgctccaaaggtggaagagttgtcatctt 630 ||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 610 cgccgcgctgctcaagtcgctggccaagagatgctccaaaggtggaagagttgtcatctt 669 Query: 631 cttggatcaagggaggcagaatttggagcaacaccgcagagagcatggagacgttgtaac 690 ||||||||||| |||| | |||||||||||| ||||| || ||| || |||||||| Sbjct: 670 tttggatcaaggacggcaaagtttggagcaacatcgcagggaacatcctgaagttgtaac 729 Query: 691 caccgatttgcctagtaggtcttccctggagaaggctgcagctgcgagcaagtatgaaat 750 |||||||||||| ||| |||| || ||||||||| | || | ||||||| |||||| Sbjct: 730 tgccgatttgcctaccaggccttctctagagaaggctactgccggtagcaagtttgaaat 789 Query: 751 agcggagtttgatgatgagcctaccttgtatcttgctgttttgcaattccaaggatgaac 810 | ||||||| ||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 790 attagagtttgttgacgagcctactttgtatcttgctgttttgcagtttcaatgatgaac 849 >ref|NM_001055976.1| Oryza sativa (japonica cultivar-group) Os03g0226700 (Os03g0226700) mRNA, complete cds Length = 789 Score = 541 bits (273), Expect = e-150 Identities = 462/525 (88%) Strand = Plus / Plus Query: 271 cctcccccgcgcgctcgccgcgggggcgctctcgccggcgtcgcgggtgctggccgtgac 330 |||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 255 cctcccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgac 314 Query: 331 gcccactgcgtccttcgtgggcgccctcctctctgagaccccctgcgagctgctggtagc 390 ||| | |||||||||||| |||||||||||| | | |||||||||||| ||||| || Sbjct: 315 ccccgcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggc 374 Query: 391 cgcgcacgagtcgctgtacgtgctggccgggatcaaggaggagcacgatgaggtgaggtg 450 |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 375 cgcgcacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtg 434 Query: 451 cttccatctggagggagggggagggggcaggggaggcggcgtggtggaggccgtgccgga 510 |||||| |||||||||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 435 cttccacttggagggaggcggaggcggcaggggaggcggagtggtggagggcgtgccgga 494 Query: 511 gaggtttgacgcgttcgacgcggtgttcgtgtgctacttccccgggatgggtgtctcggc 570 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 495 gaggttcgacgcgttcgacgccgtgttcgtctgctacttccccgggatgggtgtctcggc 554 Query: 571 cgcggcgctgctcgagtcgctggcgaagaggtgctccaaaggtggaagagttgtcatctt 630 ||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 555 cgccgcgctgctcaagtcgctggccaagagatgctccaaaggtggaagagttgtcatctt 614 Query: 631 cttggatcaagggaggcagaatttggagcaacaccgcagagagcatggagacgttgtaac 690 ||||||||||| |||| | |||||||||||| ||||| || ||| || |||||||| Sbjct: 615 tttggatcaaggacggcaaagtttggagcaacatcgcagggaacatcctgaagttgtaac 674 Query: 691 caccgatttgcctagtaggtcttccctggagaaggctgcagctgcgagcaagtatgaaat 750 |||||||||||| ||| |||| || ||||||||| | || | ||||||| |||||| Sbjct: 675 tgccgatttgcctaccaggccttctctagagaaggctactgccggtagcaagtttgaaat 734 Query: 751 agcggagtttgatgatgagcctaccttgtatcttgctgttttgca 795 | ||||||| ||| |||||||| |||||||||||||||||||| Sbjct: 735 attagagtttgttgacgagcctactttgtatcttgctgttttgca 779 >gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 428 bits (216), Expect = e-116 Identities = 312/344 (90%) Strand = Plus / Minus Query: 271 cctcccccgcgcgctcgccgcgggggcgctctcgccggcgtcgcgggtgctggccgtgac 330 |||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 10201 cctcccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgac 10142 Query: 331 gcccactgcgtccttcgtgggcgccctcctctctgagaccccctgcgagctgctggtagc 390 ||| | |||||||||||| |||||||||||| | | |||||||||||| ||||| || Sbjct: 10141 ccccgcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggc 10082 Query: 391 cgcgcacgagtcgctgtacgtgctggccgggatcaaggaggagcacgatgaggtgaggtg 450 |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 10081 cgcgcacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtg 10022 Query: 451 cttccatctggagggagggggagggggcaggggaggcggcgtggtggaggccgtgccgga 510 |||||| |||||||||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 10021 cttccacttggagggaggcggaggcggcaggggaggcggagtggtggagggcgtgccgga 9962 Query: 511 gaggtttgacgcgttcgacgcggtgttcgtgtgctacttccccgggatgggtgtctcggc 570 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 9961 gaggttcgacgcgttcgacgccgtgttcgtctgctacttccccgggatgggtgtctcggc 9902 Query: 571 cgcggcgctgctcgagtcgctggcgaagaggtgctccaaaggtg 614 ||| ||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 9901 cgccgcgctgctcaagtcgctggccaagagatgctccaaaggtg 9858 Score = 129 bits (65), Expect = 2e-26 Identities = 167/201 (83%) Strand = Plus / Minus Query: 610 aggtggaagagttgtcatcttcttggatcaagggaggcagaatttggagcaacaccgcag 669 ||||||||||||||||||||| ||||||||||| |||| | |||||||||||| ||||| Sbjct: 8875 aggtggaagagttgtcatctttttggatcaaggacggcaaagtttggagcaacatcgcag 8816 Query: 670 agagcatggagacgttgtaaccaccgatttgcctagtaggtcttccctggagaaggctgc 729 || ||| || |||||||| |||||||||||| ||| |||| || ||||||||| | Sbjct: 8815 ggaacatcctgaagttgtaactgccgatttgcctaccaggccttctctagagaaggctac 8756 Query: 730 agctgcgagcaagtatgaaatagcggagtttgatgatgagcctaccttgtatcttgctgt 789 || | ||||||| ||||||| ||||||| ||| |||||||| |||||||||||||| Sbjct: 8755 tgccggtagcaagtttgaaatattagagtttgttgacgagcctactttgtatcttgctgt 8696 Query: 790 tttgcaattccaaggatgaac 810 |||||| || ||| ||||||| Sbjct: 8695 tttgcagtttcaatgatgaac 8675 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 428 bits (216), Expect = e-116 Identities = 312/344 (90%) Strand = Plus / Minus Query: 271 cctcccccgcgcgctcgccgcgggggcgctctcgccggcgtcgcgggtgctggccgtgac 330 |||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 6623866 cctcccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgac 6623807 Query: 331 gcccactgcgtccttcgtgggcgccctcctctctgagaccccctgcgagctgctggtagc 390 ||| | |||||||||||| |||||||||||| | | |||||||||||| ||||| || Sbjct: 6623806 ccccgcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggc 6623747 Query: 391 cgcgcacgagtcgctgtacgtgctggccgggatcaaggaggagcacgatgaggtgaggtg 450 |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 6623746 cgcgcacgagtccctgtacgtgctggcggggatcaaggaggggcacgacgaggtgaggtg 6623687 Query: 451 cttccatctggagggagggggagggggcaggggaggcggcgtggtggaggccgtgccgga 510 |||||| |||||||||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 6623686 cttccacttggagggaggcggaggcggcaggggaggcggagtggtggagggcgtgccgga 6623627 Query: 511 gaggtttgacgcgttcgacgcggtgttcgtgtgctacttccccgggatgggtgtctcggc 570 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 6623626 gaggttcgacgcgttcgacgccgtgttcgtctgctacttccccgggatgggtgtctcggc 6623567 Query: 571 cgcggcgctgctcgagtcgctggcgaagaggtgctccaaaggtg 614 ||| ||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 6623566 cgccgcgctgctcaagtcgctggccaagagatgctccaaaggtg 6623523 Score = 129 bits (65), Expect = 2e-26 Identities = 167/201 (83%) Strand = Plus / Minus Query: 610 aggtggaagagttgtcatcttcttggatcaagggaggcagaatttggagcaacaccgcag 669 ||||||||||||||||||||| ||||||||||| |||| | |||||||||||| ||||| Sbjct: 6622540 aggtggaagagttgtcatctttttggatcaaggacggcaaagtttggagcaacatcgcag 6622481 Query: 670 agagcatggagacgttgtaaccaccgatttgcctagtaggtcttccctggagaaggctgc 729 || ||| || |||||||| |||||||||||| ||| |||| || ||||||||| | Sbjct: 6622480 ggaacatcctgaagttgtaactgccgatttgcctaccaggccttctctagagaaggctac 6622421 Query: 730 agctgcgagcaagtatgaaatagcggagtttgatgatgagcctaccttgtatcttgctgt 789 || | ||||||| ||||||| ||||||| ||| |||||||| |||||||||||||| Sbjct: 6622420 tgccggtagcaagtttgaaatattagagtttgttgacgagcctactttgtatcttgctgt 6622361 Query: 790 tttgcaattccaaggatgaac 810 |||||| || ||| ||||||| Sbjct: 6622360 tttgcagtttcaatgatgaac 6622340 >emb|CT835226.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA039D12, full insert sequence Length = 946 Score = 420 bits (212), Expect = e-114 Identities = 311/344 (90%) Strand = Plus / Plus Query: 271 cctcccccgcgcgctcgccgcgggggcgctctcgccggcgtcgcgggtgctggccgtgac 330 |||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||| Sbjct: 309 cctcccccgcgcgctcgcggcgggggccctctcccccgcgtcgcgggtgctggccgtgac 368 Query: 331 gcccactgcgtccttcgtgggcgccctcctctctgagaccccctgcgagctgctggtagc 390 ||| | |||||||||||| |||||||||||| | | |||||||||||| ||||| || Sbjct: 369 ccccgcgccgtccttcgtggacgccctcctctcggggcacccctgcgagctcctggtggc 428 Query: 391 cgcgcacgagtcgctgtacgtgctggccgggatcaaggaggagcacgatgaggtgaggtg 450 |||||||||||| ||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 429 cgcgcacgagtccctgtacgtgttggcggggatcaaggaggggcacgacgaggtgaggtg 488 Query: 451 cttccatctggagggagggggagggggcaggggaggcggcgtggtggaggccgtgccgga 510 |||||| |||||||||| ||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 489 cttccacttggagggaggcggaggcggcaggggaggcggagtggtggagggcgtgccgga 548 Query: 511 gaggtttgacgcgttcgacgcggtgttcgtgtgctacttccccgggatgggtgtctcggc 570 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 549 gaggttcgacgcgttcgacgccgtgttcgtctgctacttccccgggatgggtgtctcggc 608 Query: 571 cgcggcgctgctcgagtcgctggcgaagaggtgctccaaaggtg 614 ||| ||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 609 cgccgcgctgctcaagtcgctggccaagagatgctccaaaggtg 652