BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009o01 (632 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067936.1| Oryza sativa (japonica cultivar-group) Os08g... 363 6e-97 dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 6e-97 gb|AY105447.1| Zea mays PCO139673 mRNA sequence 210 5e-51 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46 dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46 >ref|NM_001067936.1| Oryza sativa (japonica cultivar-group) Os08g0265500 (Os08g0265500) mRNA, partial cds Length = 3643 Score = 363 bits (183), Expect = 6e-97 Identities = 288/323 (89%) Strand = Plus / Plus Query: 1 gtttgggtatcgaaacagaacaacagcttatcggtttgtcacattggttgatgtcatgta 60 |||||||| || ||| ||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 3012 gtttgggtctcagaaccgaacagcagcttatcggtttgtcacattggttgatgttatgta 3071 Query: 61 tgagaacaaggcgaggctattatgcacagctgaggctgcaccgatagaactgtttgagaa 120 |||||||| || ||| ||||||| ||||| || |||||||| |||||||| |||||||| Sbjct: 3072 cgagaacaaagcaaggttattatgtacagcagacgctgcaccaatagaactatttgagaa 3131 Query: 121 tatagtgacggtggctgaagcacaaaaaaattcacctagatcttcacgttcacagaaaag 180 ||||||||| || |||||||||| ||||| ||| |||||||||||||| || ||||||| Sbjct: 3132 tatagtgacagttgctgaagcacgaaaaatttctcctagatcttcacggtcgcagaaaac 3191 Query: 181 tgatgatcctgatctatgtgtggacaatgagctaggatttgcaaaagatcgtacaattag 240 |||||||||||| | |||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 3192 tgatgatcctgacttgtgtgtggacaatgagctaggatttgccaaggatcgaacaattag 3251 Query: 241 taggttgacggagatcaacagtagagagtacttagaggactttgaagtgaaattgcaaca 300 ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||| Sbjct: 3252 taggttgacagagatcaacagtagagagtacttggaggactttgaagcgaaattgcgaca 3311 Query: 301 gcccttgcaaggtgtacataatg 323 |||||| ||||||||| |||||| Sbjct: 3312 gcccttacaaggtgtagataatg 3334 >dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099M05, full insert sequence Length = 3645 Score = 363 bits (183), Expect = 6e-97 Identities = 288/323 (89%) Strand = Plus / Plus Query: 1 gtttgggtatcgaaacagaacaacagcttatcggtttgtcacattggttgatgtcatgta 60 |||||||| || ||| ||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 3014 gtttgggtctcagaaccgaacagcagcttatcggtttgtcacattggttgatgttatgta 3073 Query: 61 tgagaacaaggcgaggctattatgcacagctgaggctgcaccgatagaactgtttgagaa 120 |||||||| || ||| ||||||| ||||| || |||||||| |||||||| |||||||| Sbjct: 3074 cgagaacaaagcaaggttattatgtacagcagacgctgcaccaatagaactatttgagaa 3133 Query: 121 tatagtgacggtggctgaagcacaaaaaaattcacctagatcttcacgttcacagaaaag 180 ||||||||| || |||||||||| ||||| ||| |||||||||||||| || ||||||| Sbjct: 3134 tatagtgacagttgctgaagcacgaaaaatttctcctagatcttcacggtcgcagaaaac 3193 Query: 181 tgatgatcctgatctatgtgtggacaatgagctaggatttgcaaaagatcgtacaattag 240 |||||||||||| | |||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 3194 tgatgatcctgacttgtgtgtggacaatgagctaggatttgccaaggatcgaacaattag 3253 Query: 241 taggttgacggagatcaacagtagagagtacttagaggactttgaagtgaaattgcaaca 300 ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||| Sbjct: 3254 taggttgacagagatcaacagtagagagtacttggaggactttgaagcgaaattgcgaca 3313 Query: 301 gcccttgcaaggtgtacataatg 323 |||||| ||||||||| |||||| Sbjct: 3314 gcccttacaaggtgtagataatg 3336 >gb|AY105447.1| Zea mays PCO139673 mRNA sequence Length = 1259 Score = 210 bits (106), Expect = 5e-51 Identities = 238/282 (84%) Strand = Plus / Plus Query: 14 aacagaacaacagcttatcggtttgtcacattggttgatgtcatgtatgagaacaaggcg 73 ||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||| Sbjct: 815 aacagaacagcagcttatcggttcgtcacactgattgatgttatgtacgagaacaaggca 874 Query: 74 aggctattatgcacagctgaggctgcaccgatagaactgtttgagaatatagtgacggtg 133 ||||| ||||| ||||| ||||||| ||| ||| |||||| |||||||| ||||| || Sbjct: 875 aggctgttatgtacagccgaggctggaccagtaggactgttcgagaatatcgtgactgtt 934 Query: 134 gctgaagcacaaaaaaattcacctagatcttcacgttcacagaaaagtgatgatcctgat 193 |||||||||| || |||||| ||||||||||| ||||||||||| || || |||| Sbjct: 935 gctgaagcacggaaggtttcaccaagatcttcacgctcacagaaaagcgacgacactgac 994 Query: 194 ctatgtgtggacaatgagctaggatttgcaaaagatcgtacaattagtaggttgacggag 253 ||||| |||||||||||||| |||||||| || |||||||| ||||| |||||||| ||| Sbjct: 995 ctatgcgtggacaatgagcttggatttgccaaggatcgtacgattagcaggttgacagag 1054 Query: 254 atcaacagtagagagtacttagaggactttgaagtgaaattg 295 |||||||| ||||| || || |||||||| ||| ||| |||| Sbjct: 1055 atcaacagcagagaatatttggaggacttcgaaatgagattg 1096 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Plus Query: 56 atgtatgagaacaaggcgaggctattatgcacagctgaggctgcaccgatagaactgttt 115 ||||| |||||||| || ||| ||||||| ||||| || |||||||| |||||||| ||| Sbjct: 10096954 atgtacgagaacaaagcaaggttattatgtacagcagacgctgcaccaatagaactattt 10097013 Query: 116 gagaatatagtgacggtggctgaagcacaaaaaaattcacctagatcttcacgttcacag 175 |||||||||||||| || |||||||||| ||||| ||| |||||||||||||| || ||| Sbjct: 10097014 gagaatatagtgacagttgctgaagcacgaaaaatttctcctagatcttcacggtcgcag 10097073 Query: 176 aaaagtgatgatcctgatctatgtgtggacaatgagctaggatttgcaaaagatcgtaca 235 |||| |||||||||||| | |||||||||||||||||||||||||| || ||||| ||| Sbjct: 10097074 aaaactgatgatcctgacttgtgtgtggacaatgagctaggatttgccaaggatcgaaca 10097133 Query: 236 attagtaggt 245 |||||||||| Sbjct: 10097134 attagtaggt 10097143 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 242 aggttgacggagatcaacagtagagagtacttagaggactttgaagtgaaattgcaacag 301 |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||| Sbjct: 10097222 aggttgacagagatcaacagtagagagtacttggaggactttgaagcgaaattgcgacag 10097281 Query: 302 cccttgcaaggtgtacataatg 323 ||||| ||||||||| |||||| Sbjct: 10097282 cccttacaaggtgtagataatg 10097303 >dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 194 bits (98), Expect = 3e-46 Identities = 167/190 (87%) Strand = Plus / Plus Query: 56 atgtatgagaacaaggcgaggctattatgcacagctgaggctgcaccgatagaactgttt 115 ||||| |||||||| || ||| ||||||| ||||| || |||||||| |||||||| ||| Sbjct: 56300 atgtacgagaacaaagcaaggttattatgtacagcagacgctgcaccaatagaactattt 56359 Query: 116 gagaatatagtgacggtggctgaagcacaaaaaaattcacctagatcttcacgttcacag 175 |||||||||||||| || |||||||||| ||||| ||| |||||||||||||| || ||| Sbjct: 56360 gagaatatagtgacagttgctgaagcacgaaaaatttctcctagatcttcacggtcgcag 56419 Query: 176 aaaagtgatgatcctgatctatgtgtggacaatgagctaggatttgcaaaagatcgtaca 235 |||| |||||||||||| | |||||||||||||||||||||||||| || ||||| ||| Sbjct: 56420 aaaactgatgatcctgacttgtgtgtggacaatgagctaggatttgccaaggatcgaaca 56479 Query: 236 attagtaggt 245 |||||||||| Sbjct: 56480 attagtaggt 56489 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 242 aggttgacggagatcaacagtagagagtacttagaggactttgaagtgaaattgcaacag 301 |||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||| Sbjct: 56568 aggttgacagagatcaacagtagagagtacttggaggactttgaagcgaaattgcgacag 56627 Query: 302 cccttgcaaggtgtacataatg 323 ||||| ||||||||| |||||| Sbjct: 56628 cccttacaaggtgtagataatg 56649