BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009l01 (572 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245642.1| Zea mays clone 18641 mRNA sequence 488 e-134 emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger pr... 456 e-125 emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribos... 446 e-122 emb|CT830448.1| Oryza sativa (indica cultivar-group) cDNA clone:... 385 e-103 emb|CT830447.1| Oryza sativa (indica cultivar-group) cDNA clone:... 385 e-103 >gb|DQ245642.1| Zea mays clone 18641 mRNA sequence Length = 647 Score = 488 bits (246), Expect = e-134 Identities = 291/306 (95%) Strand = Plus / Plus Query: 43 ggagaccagagagcgcggagcccgagcaaaccctagcctcccaccatggtgctccagaac 102 |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| Sbjct: 50 ggagaccagagagcgcggttcccgagcaaaccctagcctcccacgatggtgctgcagaac 109 Query: 103 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 169 Query: 163 ctcgtccagtcccccaactccttcttcatggatgtcaagtgccagggctgcttcaacatc 222 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 170 ctcgtccagtcccccaattccttcttcatggacgtcaagtgccagggctgcttcaacatc 229 Query: 223 actactgtgttcagccactcccagaccgtcgtggtctgcccaggctgccaaaccgtgctc 282 |||||||||||||||||||| ||||| || ||||| ||||||||||||||||| |||||| Sbjct: 230 actactgtgttcagccactcacagactgttgtggtgtgcccaggctgccaaacagtgctc 289 Query: 283 tgccagccgacgggtggaaaggccaggctaaccgagggatgctccttccgccgcaagggc 342 |||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 290 tgccagccaacgggtggtaaggccaggctcaccgagggttgctccttccgccgcaagggc 349 Query: 343 gactaa 348 |||||| Sbjct: 350 gactaa 355 >emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger protein Length = 493 Score = 456 bits (230), Expect = e-125 Identities = 272/286 (95%) Strand = Plus / Plus Query: 63 cccgagcaaaccctagcctcccaccatggtgctccagaacgacatcgacctgctgaaccc 122 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 10 cccgagcaagccctagcctcccacgatggtgctgcagaacgacatcgacctgctgaaccc 69 Query: 123 gccggcggagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gccggcggagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactc 129 Query: 183 cttcttcatggatgtcaagtgccagggctgcttcaacatcactactgtgttcagccactc 242 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130 cttcttcatggacgtcaagtgccagggctgcttcaacatcactactgtgttcagccattc 189 Query: 243 ccagaccgtcgtggtctgcccaggctgccaaaccgtgctctgccagccgacgggtggaaa 302 |||||| || ||||| |||||||||||||| || |||||||||||||| |||||||| || Sbjct: 190 ccagactgttgtggtgtgcccaggctgccagacggtgctctgccagccaacgggtggcaa 249 Query: 303 ggccaggctaaccgagggatgctccttccgccgcaagggcgactaa 348 |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 250 ggccaggctaaccgagggttgctccttccgtcgcaagggcgactaa 295 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 413 gtctgaaaattttgcaatgtccgcaaagtgaacccatgtttggtaattt 461 ||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 355 gtctgaaaattttgcaatgtcggcaaagtgaacccatctttggtaattt 403 >emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27A gene) Length = 596 Score = 446 bits (225), Expect = e-122 Identities = 273/289 (94%) Strand = Plus / Plus Query: 60 gagcccgagcaaaccctagcctcccaccatggtgctccagaacgacatcgacctgctgaa 119 |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 39 gagcgcgagcaaaccctagcctcccacgatggtgctgcagaacgacatcgacctgctcaa 98 Query: 120 cccgccggcggagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaa 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 cccgccggccgagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaa 158 Query: 180 ctccttcttcatggatgtcaagtgccagggctgcttcaacatcactactgtgttcagcca 239 ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 159 ctctttcttcatggacgtcaagtgccagggttgcttcaacatcactactgtgttcagcca 218 Query: 240 ctcccagaccgtcgtggtctgcccaggctgccaaaccgtgctctgccagccgacgggtgg 299 ||||||||| |||||||| ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 219 ctcccagactgtcgtggtgtgcccaggctgccaaacagtgctctgccagccaaccggtgg 278 Query: 300 aaaggccaggctaaccgagggatgctccttccgccgcaagggcgactaa 348 |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 279 caaggccaggctaactgagggctgctccttccgccgcaagggcgactaa 327 >emb|CT830448.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030E06, full insert sequence Length = 602 Score = 385 bits (194), Expect = e-103 Identities = 239/254 (94%) Strand = Plus / Plus Query: 86 ccatggtgctccagaacgacatcgacctgctgaacccgccggcggagctcgagaagctca 145 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 96 ccatggtgctctccaacgacatcgacctgctgaacccgcccgcggagctggagaagctca 155 Query: 146 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 215 Query: 206 agggctgcttcaacatcactactgtgttcagccactcccagaccgtcgtggtctgcccag 265 |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 216 agggctgcttcagcatcactactgtgttcagccactcccagacagtggtggtctgcccgg 275 Query: 266 gctgccaaaccgtgctctgccagccgacgggtggaaaggccaggctaaccgagggatgct 325 |||||||||||||||| |||||||| || |||||||||||||||||||| ||||| || | Sbjct: 276 gctgccaaaccgtgctttgccagcctacaggtggaaaggccaggctaacggaggggtgtt 335 Query: 326 ccttccgccgcaag 339 |||||||||||||| Sbjct: 336 ccttccgccgcaag 349 Score = 89.7 bits (45), Expect = 1e-14 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 394 cttagttt-tccaggatgtagtctgaaaattttgcaatgtccgcaaagtgaa-cccatgt 451 |||||||| |||||||||||||||||||||||||||||| | | ||||||| ||||||| Sbjct: 403 cttagtttctccaggatgtagtctgaaaattttgcaatgcctgtcaagtgaaccccatgt 462 Query: 452 ttggtaatttaatctct 468 ||||||||||||||||| Sbjct: 463 ttggtaatttaatctct 479 >emb|CT830447.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA013L10, full insert sequence Length = 586 Score = 385 bits (194), Expect = e-103 Identities = 239/254 (94%) Strand = Plus / Plus Query: 86 ccatggtgctccagaacgacatcgacctgctgaacccgccggcggagctcgagaagctca 145 ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 94 ccatggtgctctccaacgacatcgacctgctgaacccgcccgcggagctggagaagctca 153 Query: 146 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 213 Query: 206 agggctgcttcaacatcactactgtgttcagccactcccagaccgtcgtggtctgcccag 265 |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 214 agggctgcttcagcatcactactgtgttcagccactcccagacagtggtggtctgcccgg 273 Query: 266 gctgccaaaccgtgctctgccagccgacgggtggaaaggccaggctaaccgagggatgct 325 |||||||||||||||| |||||||| || |||||||||||||||||||| ||||| || | Sbjct: 274 gctgccaaaccgtgctttgccagcctacaggtggaaaggccaggctaacggaggggtgtt 333 Query: 326 ccttccgccgcaag 339 |||||||||||||| Sbjct: 334 ccttccgccgcaag 347 Score = 89.7 bits (45), Expect = 1e-14 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 394 cttagttt-tccaggatgtagtctgaaaattttgcaatgtccgcaaagtgaa-cccatgt 451 |||||||| |||||||||||||||||||||||||||||| | | ||||||| ||||||| Sbjct: 400 cttagtttctccaggatgtagtctgaaaattttgcaatgcctgtcaagtgaaccccatgt 459 Query: 452 ttggtaatttaatctct 468 ||||||||||||||||| Sbjct: 460 ttggtaatttaatctct 476