BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009i12 (730 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g... 190 5e-45 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39 emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 172 1e-39 gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 111 4e-21 >ref|NM_001073703.1| Oryza sativa (japonica cultivar-group) Os12g0592200 (Os12g0592200) mRNA, complete cds Length = 309 Score = 190 bits (96), Expect = 5e-45 Identities = 114/120 (95%) Strand = Plus / Plus Query: 193 cggccgcacggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctgg 252 ||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||||| Sbjct: 158 cggccgcacggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctgg 217 Query: 253 ctcggctgacggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccagggta 312 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 218 cgcggctgacggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccagggta 277 Score = 99.6 bits (50), Expect = 2e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 42 atggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgccgcccggcgccc 101 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 1 atggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgccgcccggggccc 60 Query: 102 tc 103 || Sbjct: 61 tc 62 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 172 bits (87), Expect = 1e-39 Identities = 105/111 (94%) Strand = Plus / Plus Query: 202 ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 261 |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| ||||||| Sbjct: 24849213 ggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctga 24849272 Query: 262 cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccagggta 312 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 24849273 cggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccagggta 24849323 Score = 127 bits (64), Expect = 7e-26 Identities = 151/176 (85%), Gaps = 8/176 (4%) Strand = Plus / Plus Query: 309 ggtacttgaagttaccatgtggattcatttgtcctttggaaaaggatacaactcttcttg 368 |||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 24850710 ggtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttg 24850767 Query: 369 gatgcgtctttggggaagctattctggcgtttcatccttttaactgcaaagttagaagaa 428 ||||||||||| || | ||| |||||| |||| | |||||| |||||||||||||| Sbjct: 24850768 gatgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaa 24850823 Query: 429 tttctccagcagtagctcgtctctcaaagtttctagcctagacagataaataattt 484 ||||||| ||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 24850824 actctccagtgatagctcg--tctcaaagtttctagcttagacagagaaataattt 24850877 Score = 121 bits (61), Expect = 4e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 31 aaaccctagccatggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgcc 90 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 24848936 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 24848995 Query: 91 gcccggcgccctc 103 |||||| |||||| Sbjct: 24848996 gcccggggccctc 24849008 >emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 172 bits (87), Expect = 1e-39 Identities = 105/111 (94%) Strand = Plus / Minus Query: 202 ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 261 |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| ||||||| Sbjct: 115655 ggccgctggcggcgatgatggggtcgccgctgacgacggcggcgttgctggcgcggctga 115596 Query: 262 cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccagggta 312 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115595 cggcgcacccggcggccagcgcgcgggcctgctgcgagctctcccagggta 115545 Score = 127 bits (64), Expect = 7e-26 Identities = 151/176 (85%), Gaps = 8/176 (4%) Strand = Plus / Minus Query: 309 ggtacttgaagttaccatgtggattcatttgtcctttggaaaaggatacaactcttcttg 368 |||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||| Sbjct: 114158 ggtacttgaagttaccatgtagattcact-gtcctttg-aaaaggatacaactcttcttg 114101 Query: 369 gatgcgtctttggggaagctattctggcgtttcatccttttaactgcaaagttagaagaa 428 ||||||||||| || | ||| |||||| |||| | |||||| |||||||||||||| Sbjct: 114100 gatgcgtcttttggaaggctgttctggtgttt----cgattaacttcaaagttagaagaa 114045 Query: 429 tttctccagcagtagctcgtctctcaaagtttctagcctagacagataaataattt 484 ||||||| ||||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 114044 actctccagtgatagctcg--tctcaaagtttctagcttagacagagaaataattt 113991 Score = 121 bits (61), Expect = 4e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 31 aaaccctagccatggcgtggcgcggcgtcgcctcccgcaccgtcctcgccgccgtccgcc 90 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 115932 aaaccctagccatggcgtggcgcggcgccgcctcccgcaccgtcctcgcggccgtccgcc 115873 Query: 91 gcccggcgccctc 103 |||||| |||||| Sbjct: 115872 gcccggggccctc 115860 >gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 111 bits (56), Expect = 4e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 202 ggccgctggctgcgatgatggggtcgccgttgacggcggcggcggtgctggctcggctga 261 |||| ||||| ||| |||||||||| ||| |||||| ||| |||||| |||| || || | Sbjct: 179608 ggcctctggcggcgttgatggggtccccggtgacggtggccgcggtgatggcgcgtctca 179549 Query: 262 cggcgcacccggcggccagcgcgcgggcgtgctgcgagctctcccagggtac 313 |||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 179548 cggcgcaccccggtgccagcgcgcgggcgtgctgcgagctctcccagggtac 179497