BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009e08 (1222 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064089.1| Oryza sativa (japonica cultivar-group) Os06g... 791 0.0 dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 753 0.0 gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds 408 e-110 dbj|AK063854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 6e-86 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 301 3e-78 >ref|NM_001064089.1| Oryza sativa (japonica cultivar-group) Os06g0335500 (Os06g0335500) mRNA, complete cds Length = 1273 Score = 791 bits (399), Expect = 0.0 Identities = 605/675 (89%), Gaps = 9/675 (1%) Strand = Plus / Plus Query: 268 ccgctgacgctggagctgctgcccaagggcggggcgaagcgcgggttcgcggacgccatc 327 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 305 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 364 Query: 328 gtggggggccccgccgggcagaggcgggaggcggcgaggggcaagg---------cggcc 378 || ||||| |||||||| ||| ||||||||||||| ||||||||| |||| Sbjct: 365 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcggcggcggcggcg 424 Query: 379 gcagaggaggaggaggaggaggagaagaagaaggcgcaggcgccagcggcaaaggcacag 438 || |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 425 gcggaggccgaggaggaggaggagaagaagaaggcgcaggcgccggcggcgaaggcacag 484 Query: 439 gtggtaggatggccaccaatccgcagttacaggaagaacaccctggcgatgaacctgcct 498 |||||||||||||||||||||||||| ||||||||||||||| ||||||||| || |||| Sbjct: 485 gtggtaggatggccaccaatccgcagctacaggaagaacaccatggcgatgagccagcct 544 Query: 499 gctccgaaaagcaaagacgacgatgaggcaaggcaggcgccagcgccagggtgcctcttt 558 |||| |||| |||||||||||| ||||| | |||||| || || | || ||||||| | Sbjct: 545 gctctgaaaggcaaagacgacggcgaggcgaagcaggctccggcatccggttgcctctat 604 Query: 559 gtcaaggttagcatggatggtgctccttacctcaggaaggtggaccttaagatgtacaag 618 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 605 gtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaag 664 Query: 619 aactacaaggagctctcgctggcgctggagaaaatgttcagctgctttaccgtcggtcat 678 ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| Sbjct: 665 aactacaaggagctctctttggctctggagaagatgttcagctgctttaccgtcggtcat 724 Query: 679 aatgagtcaaatgggaaatcggggagaggtggattatctgattgccgactgatggatctt 738 ||| ||||||||||| || ||||||| |||||||||||||||||| |||||||||||| Sbjct: 725 ggtgaatcaaatgggaagtcagggagagatggattatctgattgccgcctgatggatctt 784 Query: 739 aaaaatgggactgaacttgtgctcacctatgaggacaaggatggagattggatgcttgtt 798 |||||||| || |||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 785 aaaaatggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgtt 844 Query: 799 ggtgatgttccatggggaatgttcacggacagctgtaggagactgaggatcatgaaaggg 858 ||||||||||| ||| |||||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 845 ggtgatgttccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaagggg 904 Query: 859 tcagatgcagtgggccttgctccaagagccaccgagaagagcaagaatcagaactaggca 918 |||||||||||||||||||||||||||||||| || |||||||| |||| ||||| ||| Sbjct: 905 tcagatgcagtgggccttgctccaagagccactgacaagagcaaaaatcggaactgagca 964 Query: 919 aacgatgaacccaat 933 || |||||||||||| Sbjct: 965 aaagatgaacccaat 979 Score = 99.6 bits (50), Expect = 3e-17 Identities = 108/127 (85%), Gaps = 9/127 (7%) Strand = Plus / Plus Query: 136 ggcatggagccgccactggagcgggactacatcgggctgtcgccagcggtggcggcggcg 195 ||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 158 ggcatggcgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggcg 217 Query: 196 ------acggagctgcgcctgggcctgccgggaa---cggaggaggccgaggcggagggc 246 |||||||||||||| || |||||||| | |||||||||| ||| |||||||| Sbjct: 218 ctggcaacggagctgcgccttgggctgccggggactgcggaggaggctgagtcggagggc 277 Query: 247 ggtggag 253 || |||| Sbjct: 278 ggcggag 284 >dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 753 bits (380), Expect = 0.0 Identities = 603/678 (88%), Gaps = 12/678 (1%) Strand = Plus / Plus Query: 268 ccgctgacgctggagctgctgcccaagggcggggcgaagcgcgggttcgcggacgccatc 327 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 306 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 365 Query: 328 gtggggggccccgccgggcagaggcgggaggcggcgaggggcaaggcggccgcagaggag 387 || ||||| |||||||| ||| ||||||||||||| ||||||||||||| || | || | Sbjct: 366 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcggcggcggcggcg 425 Query: 388 gaggagga---------ggaggagaagaagaa---ggcgcaggcgccagcggcaaaggca 435 | |||||| ||||||| ||||||| |||||||||||| ||||| |||||| Sbjct: 426 gcggaggaggccgaggaggaggaggagaagaagaaggcgcaggcgccggcggcgaaggca 485 Query: 436 caggtggtaggatggccaccaatccgcagttacaggaagaacaccctggcgatgaacctg 495 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || | Sbjct: 486 caggtggtaggatggccaccaatccgcagctacaggaagaacaccatggcgatgagccag 545 Query: 496 cctgctccgaaaagcaaagacgacgatgaggcaaggcaggcgccagcgccagggtgcctc 555 ||||||| |||| |||||||||||| ||||| | |||||| || || | || |||||| Sbjct: 546 cctgctctgaaaggcaaagacgacggcgaggcgaagcaggctccggcatccggttgcctc 605 Query: 556 tttgtcaaggttagcatggatggtgctccttacctcaggaaggtggaccttaagatgtac 615 | ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 606 tatgtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtac 665 Query: 616 aagaactacaaggagctctcgctggcgctggagaaaatgttcagctgctttaccgtcggt 675 |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| Sbjct: 666 aagaactacaaggagctctctttggctctggagaagatgttcagctgctttaccgtcggt 725 Query: 676 cataatgagtcaaatgggaaatcggggagaggtggattatctgattgccgactgatggat 735 ||| ||| ||||||||||| || ||||||| |||||||||||||||||| ||||||||| Sbjct: 726 catggtgaatcaaatgggaagtcagggagagatggattatctgattgccgcctgatggat 785 Query: 736 cttaaaaatgggactgaacttgtgctcacctatgaggacaaggatggagattggatgctt 795 ||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 786 cttaaaaatggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgctt 845 Query: 796 gttggtgatgttccatggggaatgttcacggacagctgtaggagactgaggatcatgaaa 855 |||||||||||||| ||| |||||||||| |||||||||||||| |||||||| ||||| Sbjct: 846 gttggtgatgttccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaag 905 Query: 856 gggtcagatgcagtgggccttgctccaagagccaccgagaagagcaagaatcagaactag 915 ||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||| Sbjct: 906 gggtcagatgcagtgggccttgctccaagagccactgacaagagcaaaaatcggaactga 965 Query: 916 gcaaacgatgaacccaat 933 ||||| |||||||||||| Sbjct: 966 gcaaaagatgaacccaat 983 Score = 99.6 bits (50), Expect = 3e-17 Identities = 108/127 (85%), Gaps = 9/127 (7%) Strand = Plus / Plus Query: 136 ggcatggagccgccactggagcgggactacatcgggctgtcgccagcggtggcggcggcg 195 ||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 159 ggcatggcgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggcg 218 Query: 196 ------acggagctgcgcctgggcctgccgggaa---cggaggaggccgaggcggagggc 246 |||||||||||||| || |||||||| | |||||||||| ||| |||||||| Sbjct: 219 ctggcaacggagctgcgccttgggctgccggggactgcggaggaggctgagtcggagggc 278 Query: 247 ggtggag 253 || |||| Sbjct: 279 ggcggag 285 >gb|AY847062.1| Avena sativa Aux/IAA1 mRNA, partial cds Length = 552 Score = 408 bits (206), Expect = e-110 Identities = 345/390 (88%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 384 ggaggaggaggaggaggagaagaagaaggcgcaggcgccagcggcaaaggcacaggtggt 443 |||||||||||| || ||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 152 ggaggaggaggacgacgagaagaagaaggcgcagg-gccggccgcaaaggcacaggtggt 210 Query: 444 aggatggccaccaatccgcagttacaggaagaacaccctggcgatgaacctgcctgctcc 503 |||||||||||||||||||||||| ||||||||||| |||||| || ||| ||||||| Sbjct: 211 aggatggccaccaatccgcagttatcggaagaacaccatggcgacgagcctatctgctcc 270 Query: 504 gaaaagcaaagacgacgatgaggcaaggcaggcgccagcgccagggtgcctctttgtcaa 563 | |||||||||||| | ||||||| ||||||||| | | |||||||||| | |||||| Sbjct: 271 aagaagcaaagacgaggtcgaggcaaagcaggcgcccgtggcagggtgcctatatgtcaa 330 Query: 564 ggttagcatggatggtgctccttacctcaggaaggtggaccttaagatgtacaagaacta 623 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 331 ggttagcatggatggtgcgccttacctcaggaaggtggatcttaagatgtacaagaacta 390 Query: 624 caaggagctctcgctggcgctggagaaaatgttcagctgctttaccgtcggtcataatga 683 |||||| ||||| |||| ||||||||||| ||||||||||||||| || |||||| ||| Sbjct: 391 caaggacctctctctggagctggagaaaaagttcagctgctttactgttggtcatggtga 450 Query: 684 gtcaaatgggaaatcggggagaggtggattatctgattgccgactgatggatcttaaaaa 743 |||||||| |||||||| |||| ||| ||||||||||||||||||||||| | ||||| Sbjct: 451 atcaaatggaaaatcgggaagagatggcttatctgattgccgactgatggaccctaaaag 510 Query: 744 tgggactgaacttgtgctcacctatgagga 773 ||| |||||||||||||||| || ||||| Sbjct: 511 cggggctgaacttgtgctcacatacgagga 540 >dbj|AK063854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D03, full insert sequence Length = 552 Score = 327 bits (165), Expect = 6e-86 Identities = 228/249 (91%) Strand = Plus / Plus Query: 685 tcaaatgggaaatcggggagaggtggattatctgattgccgactgatggatcttaaaaat 744 ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 10 tcaaatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaaaaat 69 Query: 745 gggactgaacttgtgctcacctatgaggacaaggatggagattggatgcttgttggtgat 804 || || |||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 70 ggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttggtgat 129 Query: 805 gttccatggggaatgttcacggacagctgtaggagactgaggatcatgaaagggtcagat 864 ||||| ||| |||||||||| |||||||||||||| |||||||| ||||| ||||||||| Sbjct: 130 gttccgtggcgaatgttcacagacagctgtaggaggctgaggattatgaaggggtcagat 189 Query: 865 gcagtgggccttgctccaagagccaccgagaagagcaagaatcagaactaggcaaacgat 924 |||||||||||||||||||||||||| || |||||||| |||| ||||| ||||| ||| Sbjct: 190 gcagtgggccttgctccaagagccactgacaagagcaaaaatcggaactgagcaaaagat 249 Query: 925 gaacccaat 933 ||||||||| Sbjct: 250 gaacccaat 258 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 301 bits (152), Expect = 3e-78 Identities = 221/244 (90%) Strand = Plus / Plus Query: 432 ggcacaggtggtaggatggccaccaatccgcagttacaggaagaacaccctggcgatgaa 491 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 13189404 ggcacaggtggtaggatggccaccaatccgcagctacaggaagaacaccatggcgatgag 13189463 Query: 492 cctgcctgctccgaaaagcaaagacgacgatgaggcaaggcaggcgccagcgccagggtg 551 || |||||||| |||| |||||||||||| ||||| | |||||| || || | || || Sbjct: 13189464 ccagcctgctctgaaaggcaaagacgacggcgaggcgaagcaggctccggcatccggttg 13189523 Query: 552 cctctttgtcaaggttagcatggatggtgctccttacctcaggaaggtggaccttaagat 611 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13189524 cctctatgtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagat 13189583 Query: 612 gtacaagaactacaaggagctctcgctggcgctggagaaaatgttcagctgctttaccgt 671 |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 13189584 gtacaagaactacaaggagctctctttggctctggagaagatgttcagctgctttaccgt 13189643 Query: 672 cggt 675 |||| Sbjct: 13189644 cggt 13189647 Score = 184 bits (93), Expect = 6e-43 Identities = 117/125 (93%) Strand = Plus / Plus Query: 685 tcaaatgggaaatcggggagaggtggattatctgattgccgactgatggatcttaaaaat 744 ||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 13190345 tcaaatgggaagtcagggagagatggattatctgattgccgcctgatggatcttaaaaat 13190404 Query: 745 gggactgaacttgtgctcacctatgaggacaaggatggagattggatgcttgttggtgat 804 || || |||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 13190405 ggaacagaacttgtgctcacttatgaggacaaggatgaagattggatgcttgttggtgat 13190464 Query: 805 gttcc 809 ||||| Sbjct: 13190465 gttcc 13190469 Score = 155 bits (78), Expect = 5e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 268 ccgctgacgctggagctgctgcccaagggcggggcgaagcgcgggttcgcggacgccatc 327 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 13188448 ccgctgacgctcgagctgctgcccaagggcggggccaagcgcgggttcgcggacgccatc 13188507 Query: 328 gtggggggccccgccgggcagaggcgggaggcggcgaggggcaaggcggc 377 || ||||| |||||||| ||| ||||||||||||| ||||||||||||| Sbjct: 13188508 gttgggggtcccgccggccagcggcgggaggcggccgggggcaaggcggc 13188557 Score = 99.6 bits (50), Expect = 3e-17 Identities = 108/127 (85%), Gaps = 9/127 (7%) Strand = Plus / Plus Query: 136 ggcatggagccgccactggagcgggactacatcgggctgtcgccagcggtggcggcggcg 195 ||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 13188301 ggcatggcgccgccacaggagcgggactacatcgggctgtcgccggcggcggcggcggcg 13188360 Query: 196 ------acggagctgcgcctgggcctgccgggaa---cggaggaggccgaggcggagggc 246 |||||||||||||| || |||||||| | |||||||||| ||| |||||||| Sbjct: 13188361 ctggcaacggagctgcgccttgggctgccggggactgcggaggaggctgagtcggagggc 13188420 Query: 247 ggtggag 253 || |||| Sbjct: 13188421 ggcggag 13188427 Score = 93.7 bits (47), Expect = 2e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 815 gaatgttcacggacagctgtaggagactgaggatcatgaaagggtcagatgcagtgggcc 874 |||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 13191083 gaatgttcacagacagctgtaggaggctgaggattatgaaggggtcagatgcagtgggcc 13191142 Query: 875 ttg 877 ||| Sbjct: 13191143 ttg 13191145