BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009d10 (1021 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072785.1| Oryza sativa (japonica cultivar-group) Os12g... 361 4e-96 dbj|AK069543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 4e-96 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 287 4e-74 emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 287 4e-74 emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494... 287 4e-74 >ref|NM_001072785.1| Oryza sativa (japonica cultivar-group) Os12g0168200 (Os12g0168200) mRNA, complete cds Length = 1197 Score = 361 bits (182), Expect = 4e-96 Identities = 302/342 (88%) Strand = Plus / Plus Query: 73 gaggtacgcaatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctact 132 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 137 gaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgct 196 Query: 133 gagccgcgcggggctcgacgtcgcctcctacggcactggcgcgcaagtcaagctcccggg 192 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||| || Sbjct: 197 cggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccgg 256 Query: 193 cccctccctccacgagcccaacgtctacagcttcggcaccccctacaaggccatccacga 252 ||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 257 cccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacga 316 Query: 253 cgacctccgccgcaaggaccccgacctgtacaaaaggaacggcttgctgccgatgctgaa 312 ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 317 cgacctccgccgcaaggaccccgacctgtacaagaggaacggcctgctgccaatgctgaa 376 Query: 313 gagaaacagcaccgtcaagactgcgccgcagcgttggcaggagaacgcgggtgatggacc 372 ||| |||| | | |||||| ||||||||| | |||||||| || || || ||||| | Sbjct: 377 gaggaacacctcagtcaagctggcgccgcagaggtggcaggacaatgccggcgatgggct 436 Query: 373 ctttgatgtggtgttcacttttgaggagaaggtcttcgactt 414 ||||||||| | |||| |||||||||| |||||||||||| Sbjct: 437 gtttgatgtgatattcagctttgaggagagggtcttcgactt 478 Score = 129 bits (65), Expect = 2e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 596 gctgataatcaatatggatgtcaaagataatcatgaagaagctggtgtaggggcacagct 655 ||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||| Sbjct: 527 gctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagct 586 Query: 656 tgctttagatttgtgccagaagcttgaag 684 ||||||||||||||| ||||||||||||| Sbjct: 587 tgctttagatttgtgtcagaagcttgaag 615 >dbj|AK069543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025N02, full insert sequence Length = 1199 Score = 361 bits (182), Expect = 4e-96 Identities = 302/342 (88%) Strand = Plus / Plus Query: 73 gaggtacgcaatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctact 132 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139 gaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgct 198 Query: 133 gagccgcgcggggctcgacgtcgcctcctacggcactggcgcgcaagtcaagctcccggg 192 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||| || Sbjct: 199 cggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccgg 258 Query: 193 cccctccctccacgagcccaacgtctacagcttcggcaccccctacaaggccatccacga 252 ||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 259 cccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacga 318 Query: 253 cgacctccgccgcaaggaccccgacctgtacaaaaggaacggcttgctgccgatgctgaa 312 ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 319 cgacctccgccgcaaggaccccgacctgtacaagaggaacggcctgctgccaatgctgaa 378 Query: 313 gagaaacagcaccgtcaagactgcgccgcagcgttggcaggagaacgcgggtgatggacc 372 ||| |||| | | |||||| ||||||||| | |||||||| || || || ||||| | Sbjct: 379 gaggaacacctcagtcaagctggcgccgcagaggtggcaggacaatgccggcgatgggct 438 Query: 373 ctttgatgtggtgttcacttttgaggagaaggtcttcgactt 414 ||||||||| | |||| |||||||||| |||||||||||| Sbjct: 439 gtttgatgtgatattcagctttgaggagagggtcttcgactt 480 Score = 129 bits (65), Expect = 2e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 596 gctgataatcaatatggatgtcaaagataatcatgaagaagctggtgtaggggcacagct 655 ||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||| Sbjct: 529 gctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagct 588 Query: 656 tgctttagatttgtgccagaagcttgaag 684 ||||||||||||||| ||||||||||||| Sbjct: 589 tgctttagatttgtgtcagaagcttgaag 617 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 287 bits (145), Expect = 4e-74 Identities = 193/209 (92%) Strand = Plus / Minus Query: 73 gaggtacgcaatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctact 132 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3452966 gaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgct 3452907 Query: 133 gagccgcgcggggctcgacgtcgcctcctacggcactggcgcgcaagtcaagctcccggg 192 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||| || Sbjct: 3452906 cggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccgg 3452847 Query: 193 cccctccctccacgagcccaacgtctacagcttcggcaccccctacaaggccatccacga 252 ||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 3452846 cccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacga 3452787 Query: 253 cgacctccgccgcaaggaccccgacctgt 281 ||||||||||||||||||||||||||||| Sbjct: 3452786 cgacctccgccgcaaggaccccgacctgt 3452758 Score = 115 bits (58), Expect = 4e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 596 gctgataatcaatatggatgtcaaagataatcatgaagaagctggtgtaggggcacagct 655 ||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||| Sbjct: 3452083 gctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagct 3452024 Query: 656 tgctttagatttgtgccagaag 677 ||||||||||||||| |||||| Sbjct: 3452023 tgctttagatttgtgtcagaag 3452002 Score = 77.8 bits (39), Expect = 8e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 280 gtacaaaaggaacggcttgctgccgatgctgaagagaaacagcaccgtcaagactgcgcc 339 |||||| ||||||||| ||||||| ||||||||||| |||| | | |||||| ||||| Sbjct: 3452422 gtacaagaggaacggcctgctgccaatgctgaagaggaacacctcagtcaagctggcgcc 3452363 Query: 340 gcagcgttggcaggagaacgcgggtgatggaccctttgatgtggtgttcacttttgagga 399 |||| | |||||||| || || || ||||| | ||||||||| | |||| |||||||| Sbjct: 3452362 gcagaggtggcaggacaatgccggcgatgggctgtttgatgtgatattcagctttgagga 3452303 Query: 400 gaaggtcttcgactt 414 || |||||||||||| Sbjct: 3452302 gagggtcttcgactt 3452288 >emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 287 bits (145), Expect = 4e-74 Identities = 193/209 (92%) Strand = Plus / Minus Query: 73 gaggtacgcaatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctact 132 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132019 gaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgct 131960 Query: 133 gagccgcgcggggctcgacgtcgcctcctacggcactggcgcgcaagtcaagctcccggg 192 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||| || Sbjct: 131959 cggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccgg 131900 Query: 193 cccctccctccacgagcccaacgtctacagcttcggcaccccctacaaggccatccacga 252 ||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 131899 cccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacga 131840 Query: 253 cgacctccgccgcaaggaccccgacctgt 281 ||||||||||||||||||||||||||||| Sbjct: 131839 cgacctccgccgcaaggaccccgacctgt 131811 Score = 115 bits (58), Expect = 4e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 596 gctgataatcaatatggatgtcaaagataatcatgaagaagctggtgtaggggcacagct 655 ||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||| Sbjct: 131136 gctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagct 131077 Query: 656 tgctttagatttgtgccagaag 677 ||||||||||||||| |||||| Sbjct: 131076 tgctttagatttgtgtcagaag 131055 Score = 77.8 bits (39), Expect = 8e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 280 gtacaaaaggaacggcttgctgccgatgctgaagagaaacagcaccgtcaagactgcgcc 339 |||||| ||||||||| ||||||| ||||||||||| |||| | | |||||| ||||| Sbjct: 131475 gtacaagaggaacggcctgctgccaatgctgaagaggaacacctcagtcaagctggcgcc 131416 Query: 340 gcagcgttggcaggagaacgcgggtgatggaccctttgatgtggtgttcacttttgagga 399 |||| | |||||||| || || || ||||| | ||||||||| | |||| |||||||| Sbjct: 131415 gcagaggtggcaggacaatgccggcgatgggctgtttgatgtgatattcagctttgagga 131356 Query: 400 gaaggtcttcgactt 414 || |||||||||||| Sbjct: 131355 gagggtcttcgactt 131341 >emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 287 bits (145), Expect = 4e-74 Identities = 193/209 (92%) Strand = Plus / Plus Query: 73 gaggtacgcaatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctact 132 ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 78948 gaggttcgcgatggtgtgctcgtcgaacatgaaccggagcatggaggcgcactcgctgct 79007 Query: 133 gagccgcgcggggctcgacgtcgcctcctacggcactggcgcgcaagtcaagctcccggg 192 |||||||||||||||||||||||||||||||||| ||| | || ||||||||||| || Sbjct: 79008 cggccgcgcggggctcgacgtcgcctcctacggcaccggcacccacgtcaagctccccgg 79067 Query: 193 cccctccctccacgagcccaacgtctacagcttcggcaccccctacaaggccatccacga 252 ||| |||||||||||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 79068 cccttccctccacgagcccaacgtctacgacttcggcaccccctacaacgtcatctacga 79127 Query: 253 cgacctccgccgcaaggaccccgacctgt 281 ||||||||||||||||||||||||||||| Sbjct: 79128 cgacctccgccgcaaggaccccgacctgt 79156 Score = 115 bits (58), Expect = 4e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 596 gctgataatcaatatggatgtcaaagataatcatgaagaagctggtgtaggggcacagct 655 ||||||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||| Sbjct: 79831 gctgataatcaatatggatgtgaaagataaccatgaagaagctggtgttggtgcaaagct 79890 Query: 656 tgctttagatttgtgccagaag 677 ||||||||||||||| |||||| Sbjct: 79891 tgctttagatttgtgtcagaag 79912 Score = 77.8 bits (39), Expect = 8e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 280 gtacaaaaggaacggcttgctgccgatgctgaagagaaacagcaccgtcaagactgcgcc 339 |||||| ||||||||| ||||||| ||||||||||| |||| | | |||||| ||||| Sbjct: 79492 gtacaagaggaacggcctgctgccaatgctgaagaggaacacctcagtcaagctggcgcc 79551 Query: 340 gcagcgttggcaggagaacgcgggtgatggaccctttgatgtggtgttcacttttgagga 399 |||| | |||||||| || || || ||||| | ||||||||| | |||| |||||||| Sbjct: 79552 gcagaggtggcaggacaatgccggcgatgggctgtttgatgtgatattcagctttgagga 79611 Query: 400 gaaggtcttcgactt 414 || |||||||||||| Sbjct: 79612 gagggtcttcgactt 79626