BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst009b12 (1046 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056492.1| Oryza sativa (japonica cultivar-group) Os03g... 432 e-117 dbj|AK103653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-117 emb|CT830773.1| Oryza sativa (indica cultivar-group) cDNA clone:... 418 e-113 gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 281 3e-72 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 281 3e-72 >ref|NM_001056492.1| Oryza sativa (japonica cultivar-group) Os03g0321000 (Os03g0321000) mRNA, complete cds Length = 1035 Score = 432 bits (218), Expect = e-117 Identities = 425/488 (87%), Gaps = 7/488 (1%) Strand = Plus / Plus Query: 349 cagcagcagcaggaggagcaggagccggtgtccttcgtgccgctgccggagcccgtgctg 408 |||||||||||||||||| ||||| ||| | | || ||||| ||||| || || | | Sbjct: 425 cagcagcagcaggaggaggaggaggcgggggcgtttgtgccttatccggaccctgtacag 484 Query: 409 gtgggccagatcacgctcgagcaactcggggcctacgacggcaaggatcccgccaagccc 468 |||||| |||||||||||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 485 gtgggcgagatcacgctcgagcagctcgcggcctacgacggcaaggaccccgcgaagccg 544 Query: 469 atcctcatcgccatccgcggccaggtctacgacgtctcgcgcggcaggctcttttatggt 528 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 545 atcctcatcgccatccgcggccaggtctacgacgtcacgcgcgggaggctcttttatggt 604 Query: 529 cctcaaggaccatattccttgtttgccgggagggatgcaactcgggccctggcattgatg 588 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 605 cctcaaggaccatattccttgtttgctgggagggatgcaactcgggcccttgcattgatg 664 Query: 589 tcatttgaccctaatgacctcactggagatttggaaggcctaagtccagatgagctggag 648 || |||||||||| ||||||||||||||||||||| ||||| ||||||| ||||| ||| Sbjct: 665 tcgtttgaccctattgacctcactggagatttggatggccttggtccagacgagctagag 724 Query: 649 gtgttgcaagattgggaagataaatttaaagagaggtaccctagggtgggtcatcttgct 708 || |||||||||||||||||||| ||||||||| |||| |||| |||||| || |||||| Sbjct: 725 gtcttgcaagattgggaagataagtttaaagagcggtatcctacggtgggccaccttgct 784 Query: 709 tcagaaaacgcaacaggcagtaatcagagcggt-gctcagcttgatcacgtggaagagga 767 |||||||| ||| | | |||| || |||| || ||||||||||||| ||||| | | Sbjct: 785 tcagaaaatgcagcggatggtaacca---cggtggcgcagcttgatcacgaggaag-gaa 840 Query: 768 tgcctagctccatgggtttgtctggttctctgtt-ttttttactggattgcgag-cggta 825 ||| | |||||| |||||||| | ||||||||| |||||||||||||||| || |||| Sbjct: 841 tgctttactccatcggtttgtcagtttctctgttcttttttactggattgcaagtgggta 900 Query: 826 gatctgat 833 |||||||| Sbjct: 901 gatctgat 908 Score = 194 bits (98), Expect = 5e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 181 atggtggcgcaggggatcgcggacgccgtgcaggcctacacgggcctctcgcccgcggcc 240 |||| |||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 251 atggcggcgcaggggatcgcggaggcggtgcaggcctacacgggcctctccccggcggcg 310 Query: 241 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtctcctccctcttcgtc 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 311 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtgtcctccctgttcgtc 370 Query: 301 gcccccgacgccgc 314 ||||| |||||||| Sbjct: 371 gccccggacgccgc 384 >dbj|AK103653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135E06, full insert sequence Length = 1036 Score = 432 bits (218), Expect = e-117 Identities = 425/488 (87%), Gaps = 7/488 (1%) Strand = Plus / Plus Query: 349 cagcagcagcaggaggagcaggagccggtgtccttcgtgccgctgccggagcccgtgctg 408 |||||||||||||||||| ||||| ||| | | || ||||| ||||| || || | | Sbjct: 426 cagcagcagcaggaggaggaggaggcgggggcgtttgtgccttatccggaccctgtacag 485 Query: 409 gtgggccagatcacgctcgagcaactcggggcctacgacggcaaggatcccgccaagccc 468 |||||| |||||||||||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 486 gtgggcgagatcacgctcgagcagctcgcggcctacgacggcaaggaccccgcgaagccg 545 Query: 469 atcctcatcgccatccgcggccaggtctacgacgtctcgcgcggcaggctcttttatggt 528 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 546 atcctcatcgccatccgcggccaggtctacgacgtcacgcgcgggaggctcttttatggt 605 Query: 529 cctcaaggaccatattccttgtttgccgggagggatgcaactcgggccctggcattgatg 588 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 606 cctcaaggaccatattccttgtttgctgggagggatgcaactcgggcccttgcattgatg 665 Query: 589 tcatttgaccctaatgacctcactggagatttggaaggcctaagtccagatgagctggag 648 || |||||||||| ||||||||||||||||||||| ||||| ||||||| ||||| ||| Sbjct: 666 tcgtttgaccctattgacctcactggagatttggatggccttggtccagacgagctagag 725 Query: 649 gtgttgcaagattgggaagataaatttaaagagaggtaccctagggtgggtcatcttgct 708 || |||||||||||||||||||| ||||||||| |||| |||| |||||| || |||||| Sbjct: 726 gtcttgcaagattgggaagataagtttaaagagcggtatcctacggtgggccaccttgct 785 Query: 709 tcagaaaacgcaacaggcagtaatcagagcggt-gctcagcttgatcacgtggaagagga 767 |||||||| ||| | | |||| || |||| || ||||||||||||| ||||| | | Sbjct: 786 tcagaaaatgcagcggatggtaacca---cggtggcgcagcttgatcacgaggaag-gaa 841 Query: 768 tgcctagctccatgggtttgtctggttctctgtt-ttttttactggattgcgag-cggta 825 ||| | |||||| |||||||| | ||||||||| |||||||||||||||| || |||| Sbjct: 842 tgctttactccatcggtttgtcagtttctctgttcttttttactggattgcaagtgggta 901 Query: 826 gatctgat 833 |||||||| Sbjct: 902 gatctgat 909 Score = 194 bits (98), Expect = 5e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 181 atggtggcgcaggggatcgcggacgccgtgcaggcctacacgggcctctcgcccgcggcc 240 |||| |||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 252 atggcggcgcaggggatcgcggaggcggtgcaggcctacacgggcctctccccggcggcg 311 Query: 241 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtctcctccctcttcgtc 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 312 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtgtcctccctgttcgtc 371 Query: 301 gcccccgacgccgc 314 ||||| |||||||| Sbjct: 372 gccccggacgccgc 385 >emb|CT830773.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA047N05, full insert sequence Length = 1067 Score = 418 bits (211), Expect = e-113 Identities = 379/429 (88%), Gaps = 7/429 (1%) Strand = Plus / Plus Query: 408 ggtgggccagatcacgctcgagcaactcggggcctacgacggcaaggatcccgccaagcc 467 ||||||| |||||||||||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 415 ggtgggcgagatcacgctcgagcagctcgcggcctacgacggcaaggaccccgcgaagcc 474 Query: 468 catcctcatcgccatccgcggccaggtctacgacgtctcgcgcggcaggctcttttatgg 527 ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 475 gatcctaatcgccatccgcggccaggtctacgacgtcacgcgcgggaggctcttttatgg 534 Query: 528 tcctcaaggaccatattccttgtttgccgggagggatgcaactcgggccctggcattgat 587 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 535 tcctcaaggaccatattccttgtttgctgggagggatgcaactcgggcccttgcattgat 594 Query: 588 gtcatttgaccctaatgacctcactggagatttggaaggcctaagtccagatgagctgga 647 ||| |||||||||| ||||||||||||||||||||| ||||| ||||||| ||||| || Sbjct: 595 gtcgtttgaccctattgacctcactggagatttggatggccttggtccagacgagctaga 654 Query: 648 ggtgttgcaagattgggaagataaatttaaagagaggtaccctagggtgggtcatcttgc 707 ||| |||||||||||||||||||| ||||||||| |||| |||| |||||| || ||||| Sbjct: 655 ggtcttgcaagattgggaagataagtttaaagagcggtatcctacggtgggccaccttgc 714 Query: 708 ttcagaaaacgcaacaggcagtaatcagagcggt-gctcagcttgatcacgtggaagagg 766 ||||||||| ||| | | |||| || |||| || ||||||||||||| ||||| | Sbjct: 715 ttcagaaaatgcagcggatggtaacca---cggtggcgcagcttgatcacgaggaag-ga 770 Query: 767 atgcctagctccatgggtttgtctggttctctgtt-ttttttactggattgcgag-cggt 824 |||| | |||||| |||||||| | ||||||||| |||||||||||||||| || ||| Sbjct: 771 atgctttactccatcggtttgtcagtttctctgttcttttttactggattgcaagtgggt 830 Query: 825 agatctgat 833 ||||||||| Sbjct: 831 agatctgat 839 Score = 194 bits (98), Expect = 5e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 181 atggtggcgcaggggatcgcggacgccgtgcaggcctacacgggcctctcgcccgcggcc 240 |||| |||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 185 atggcggcgcaggggatcgcggaggcggtgcaggcctacacgggcctctccccggcggcg 244 Query: 241 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtctcctccctcttcgtc 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 245 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtgtcctccctgttcgtc 304 Query: 301 gcccccgacgccgc 314 ||||| |||||||| Sbjct: 305 gccccggacgccgc 318 >gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 281 bits (142), Expect = 3e-72 Identities = 283/324 (87%), Gaps = 7/324 (2%) Strand = Plus / Plus Query: 513 caggctcttttatggtcctcaaggaccatattccttgtttgccgggagggatgcaactcg 572 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 126026 caggctcttttatggtcctcaaggaccatattccttgtttgctgggagggatgcaactcg 126085 Query: 573 ggccctggcattgatgtcatttgaccctaatgacctcactggagatttggaaggcctaag 632 |||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||| | Sbjct: 126086 ggcccttgcattgatgtcgtttgaccctattgacctcactggagatttggatggccttgg 126145 Query: 633 tccagatgagctggaggtgttgcaagattgggaagataaatttaaagagaggtaccctag 692 |||||| ||||| ||||| |||||||||||||||||||| ||||||||| |||| |||| Sbjct: 126146 tccagacgagctagaggtcttgcaagattgggaagataagtttaaagagcggtatcctac 126205 Query: 693 ggtgggtcatcttgcttcagaaaacgcaacaggcagtaatcagagcggt-gctcagcttg 751 |||||| || |||||||||||||| ||| | | |||| || |||| || ||||||| Sbjct: 126206 ggtgggccaccttgcttcagaaaatgcagcggatggtaacca---cggtggcgcagcttg 126262 Query: 752 atcacgtggaagaggatgcctagctccatgggtttgtctggttctctgtt-ttttttact 810 |||||| ||||| | |||| | |||||| |||||||| | ||||||||| ||||||||| Sbjct: 126263 atcacgaggaag-gaatgctttactccatcggtttgtcagtttctctgttcttttttact 126321 Query: 811 ggattgcgag-cggtagatctgat 833 ||||||| || |||||||||||| Sbjct: 126322 ggattgcaagtgggtagatctgat 126345 Score = 194 bits (98), Expect = 5e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 181 atggtggcgcaggggatcgcggacgccgtgcaggcctacacgggcctctcgcccgcggcc 240 |||| |||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 123770 atggcggcgcaggggatcgcggaggcggtgcaggcctacacgggcctctccccggcggcg 123829 Query: 241 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtctcctccctcttcgtc 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 123830 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtgtcctccctgttcgtc 123889 Query: 301 gcccccgacgccgc 314 ||||| |||||||| Sbjct: 123890 gccccggacgccgc 123903 Score = 159 bits (80), Expect = 3e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 349 cagcagcagcaggaggagcaggagccggtgtccttcgtgccgctgccggagcccgtgctg 408 |||||||||||||||||| ||||| ||| | | || ||||| ||||| || || | | Sbjct: 123944 cagcagcagcaggaggaggaggaggcgggggcgtttgtgccttatccggaccctgtacag 124003 Query: 409 gtgggccagatcacgctcgagcaactcggggcctacgacggcaaggatcccgccaagccc 468 |||||| |||||||||||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 124004 gtgggcgagatcacgctcgagcagctcgcggcctacgacggcaaggaccccgcgaagccg 124063 Query: 469 atcctcatcgccatccgcggccaggtctacgacgtctcgcgcgg 512 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124064 atcctcatcgccatccgcggccaggtctacgacgtcacgcgcgg 124107 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 281 bits (142), Expect = 3e-72 Identities = 283/324 (87%), Gaps = 7/324 (2%) Strand = Plus / Plus Query: 513 caggctcttttatggtcctcaaggaccatattccttgtttgccgggagggatgcaactcg 572 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 11572217 caggctcttttatggtcctcaaggaccatattccttgtttgctgggagggatgcaactcg 11572276 Query: 573 ggccctggcattgatgtcatttgaccctaatgacctcactggagatttggaaggcctaag 632 |||||| ||||||||||| |||||||||| ||||||||||||||||||||| ||||| | Sbjct: 11572277 ggcccttgcattgatgtcgtttgaccctattgacctcactggagatttggatggccttgg 11572336 Query: 633 tccagatgagctggaggtgttgcaagattgggaagataaatttaaagagaggtaccctag 692 |||||| ||||| ||||| |||||||||||||||||||| ||||||||| |||| |||| Sbjct: 11572337 tccagacgagctagaggtcttgcaagattgggaagataagtttaaagagcggtatcctac 11572396 Query: 693 ggtgggtcatcttgcttcagaaaacgcaacaggcagtaatcagagcggt-gctcagcttg 751 |||||| || |||||||||||||| ||| | | |||| || |||| || ||||||| Sbjct: 11572397 ggtgggccaccttgcttcagaaaatgcagcggatggtaacca---cggtggcgcagcttg 11572453 Query: 752 atcacgtggaagaggatgcctagctccatgggtttgtctggttctctgtt-ttttttact 810 |||||| ||||| | |||| | |||||| |||||||| | ||||||||| ||||||||| Sbjct: 11572454 atcacgaggaag-gaatgctttactccatcggtttgtcagtttctctgttcttttttact 11572512 Query: 811 ggattgcgag-cggtagatctgat 833 ||||||| || |||||||||||| Sbjct: 11572513 ggattgcaagtgggtagatctgat 11572536 Score = 194 bits (98), Expect = 5e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 181 atggtggcgcaggggatcgcggacgccgtgcaggcctacacgggcctctcgcccgcggcc 240 |||| |||||||||||||||||| || ||||||||||||||||||||||| || ||||| Sbjct: 11569961 atggcggcgcaggggatcgcggaggcggtgcaggcctacacgggcctctccccggcggcg 11570020 Query: 241 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtctcctccctcttcgtc 300 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 11570021 gccgtcaccatcctggccctcatgctcgccacctacctcctcgtgtcctccctgttcgtc 11570080 Query: 301 gcccccgacgccgc 314 ||||| |||||||| Sbjct: 11570081 gccccggacgccgc 11570094 Score = 159 bits (80), Expect = 3e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 349 cagcagcagcaggaggagcaggagccggtgtccttcgtgccgctgccggagcccgtgctg 408 |||||||||||||||||| ||||| ||| | | || ||||| ||||| || || | | Sbjct: 11570135 cagcagcagcaggaggaggaggaggcgggggcgtttgtgccttatccggaccctgtacag 11570194 Query: 409 gtgggccagatcacgctcgagcaactcggggcctacgacggcaaggatcccgccaagccc 468 |||||| |||||||||||||||| |||| |||||||||||||||||| ||||| ||||| Sbjct: 11570195 gtgggcgagatcacgctcgagcagctcgcggcctacgacggcaaggaccccgcgaagccg 11570254 Query: 469 atcctcatcgccatccgcggccaggtctacgacgtctcgcgcgg 512 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11570255 atcctcatcgccatccgcggccaggtctacgacgtcacgcgcgg 11570298