BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst008o21 (769 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067478.1| Oryza sativa (japonica cultivar-group) Os08g... 335 2e-88 gb|AY110490.1| Zea mays CL34009_1 mRNA sequence 280 8e-72 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 >ref|NM_001067478.1| Oryza sativa (japonica cultivar-group) Os08g0135600 (Os08g0135600) mRNA, complete cds Length = 1572 Score = 335 bits (169), Expect = 2e-88 Identities = 250/277 (90%) Strand = Plus / Plus Query: 252 cgcaggcccagccgcccgcgctcgacctcgccgagcaacccaaggccatgagccacgcgc 311 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1292 cgcaggcccagccgcccgcgctcgacctcgccgagcatcccaaggccatgagccacgcgc 1351 Query: 312 tcatcctcgctgccaagaagtttgatgctcttgttgcggcattgccactgtcatcagaag 371 || ||||||| |||||||||||||||||||||||| | || |||||||| ||||| |||| Sbjct: 1352 tcgtcctcgccgccaagaagtttgatgctcttgtttctgcgttgccactatcatctgaag 1411 Query: 372 aggatcagttgaaaagaattcaagagctacaggcagagaatgaagttgtgggattggagc 431 |||||||| ||||||||||| |||||||||||||||||||||||||||| || |||| Sbjct: 1412 aggatcagctgaaaagaattaaagagctacaggcagagaatgaagttgtaggcacagagc 1471 Query: 432 ttcagaaacaactggaagctgctgaactggaactgaagcaggttgaagtgttgtttaacg 491 ||||||||||||||||||||||||| ||||| |||||||| ||||| | | ||||| | Sbjct: 1472 ttcagaaacaactggaagctgctgagctggagctgaagcaagttgaggctctttttaatg 1531 Query: 492 aagctacagacaattgtataaatttgaagaagccaga 528 |||||||||| |||||||||| |||||||||||||| Sbjct: 1532 aagctacagatcattgtataaacttgaagaagccaga 1568 Score = 161 bits (81), Expect = 5e-36 Identities = 90/93 (96%) Strand = Plus / Plus Query: 49 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggccgtcaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 1099 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggcggtgaa 1158 Query: 109 caccttcggcacgctgcagcgggacgcgccgcc 141 ||||||||| ||||||||||||||||||||||| Sbjct: 1159 caccttcgggacgctgcagcgggacgcgccgcc 1191 >gb|AY110490.1| Zea mays CL34009_1 mRNA sequence Length = 612 Score = 280 bits (141), Expect = 8e-72 Identities = 237/269 (88%) Strand = Plus / Plus Query: 263 ccgcccgcgctcgacctcgccgagcaacccaaggccatgagccacgcgctcatcctcgct 322 |||||||||| |||||| |||||||||||||||| ||||||| ||| || ||||||| Sbjct: 120 ccgcccgcgcctgacctcaccgagcaacccaaggctatgagccgcgcccttgtcctcgcg 179 Query: 323 gccaagaagtttgatgctcttgttgcggcattgccactgtcatcagaagaggatcagttg 382 ||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| || Sbjct: 180 gccaagaagtttgatgcacttgttgcagcagtgccactatcatcagaagaggatcaagtg 239 Query: 383 aaaagaattcaagagctacaggcagagaatgaagttgtgggattggagcttcagaaacaa 442 |||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 240 aaaagaatccaagagctacaggcagagaatgaagttgtgggactggagctccagaagcaa 299 Query: 443 ctggaagctgctgaactggaactgaagcaggttgaagtgttgtttaacgaagctacagac 502 || |||||||| ||| ||| ||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 300 cttgaagctgccgaaagggagttgaagcaggttgaggtgctgtttaatgaagcaacagac 359 Query: 503 aattgtataaatttgaagaagccagatta 531 ||||| |||||||| ||||||| |||||| Sbjct: 360 aattgcataaattttaagaagctagatta 388 Score = 77.8 bits (39), Expect = 6e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 145 ccgcctctccaacagctaccccgacccgctcaaccccaaccctaatcccga 195 ||||||||||| ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2 ccgcctctccagcagctaccctgacccgctcaaccccaaccctaagcccga 52 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 216 bits (109), Expect = 1e-52 Identities = 127/133 (95%) Strand = Plus / Minus Query: 49 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggccgtcaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 2009034 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggcggtgaa 2008975 Query: 109 caccttcggcacgctgcagcgggacgcgccgcccgtccgcctctccaacagctaccccga 168 ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 2008974 caccttcgggacgctgcagcgggacgcgccgccggtccgcctctccaacaactacccgga 2008915 Query: 169 cccgctcaacccc 181 ||||||||||||| Sbjct: 2008914 cccgctcaacccc 2008902 Score = 135 bits (68), Expect = 3e-28 Identities = 77/80 (96%) Strand = Plus / Minus Query: 252 cgcaggcccagccgcccgcgctcgacctcgccgagcaacccaaggccatgagccacgcgc 311 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2008789 cgcaggcccagccgcccgcgctcgacctcgccgagcatcccaaggccatgagccacgcgc 2008730 Query: 312 tcatcctcgctgccaagaag 331 || ||||||| ||||||||| Sbjct: 2008729 tcgtcctcgccgccaagaag 2008710 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 330 agtttgatgctcttgttgcggcattgccactgtcatcagaagaggatcagttgaaaagaa 389 ||||||||||||||||| | || |||||||| ||||| |||||||||||| ||||||||| Sbjct: 2008190 agtttgatgctcttgtttctgcgttgccactatcatctgaagaggatcagctgaaaagaa 2008131 Query: 390 ttcaagagctacagg 404 || |||||||||||| Sbjct: 2008130 ttaaagagctacagg 2008116 >dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 216 bits (109), Expect = 1e-52 Identities = 127/133 (95%) Strand = Plus / Minus Query: 49 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggccgtcaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 2564 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggcggtgaa 2505 Query: 109 caccttcggcacgctgcagcgggacgcgccgcccgtccgcctctccaacagctaccccga 168 ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 2504 caccttcgggacgctgcagcgggacgcgccgccggtccgcctctccaacaactacccgga 2445 Query: 169 cccgctcaacccc 181 ||||||||||||| Sbjct: 2444 cccgctcaacccc 2432 Score = 135 bits (68), Expect = 3e-28 Identities = 77/80 (96%) Strand = Plus / Minus Query: 252 cgcaggcccagccgcccgcgctcgacctcgccgagcaacccaaggccatgagccacgcgc 311 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2319 cgcaggcccagccgcccgcgctcgacctcgccgagcatcccaaggccatgagccacgcgc 2260 Query: 312 tcatcctcgctgccaagaag 331 || ||||||| ||||||||| Sbjct: 2259 tcgtcctcgccgccaagaag 2240 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 330 agtttgatgctcttgttgcggcattgccactgtcatcagaagaggatcagttgaaaagaa 389 ||||||||||||||||| | || |||||||| ||||| |||||||||||| ||||||||| Sbjct: 1720 agtttgatgctcttgtttctgcgttgccactatcatctgaagaggatcagctgaaaagaa 1661 Query: 390 ttcaagagctacagg 404 || |||||||||||| Sbjct: 1660 ttaaagagctacagg 1646 >dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 216 bits (109), Expect = 1e-52 Identities = 127/133 (95%) Strand = Plus / Minus Query: 49 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggccgtcaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 134232 gatggacatcatctcgcagctgcaggagcagctgaacgagatggcgatggtggcggtgaa 134173 Query: 109 caccttcggcacgctgcagcgggacgcgccgcccgtccgcctctccaacagctaccccga 168 ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 134172 caccttcgggacgctgcagcgggacgcgccgccggtccgcctctccaacaactacccgga 134113 Query: 169 cccgctcaacccc 181 ||||||||||||| Sbjct: 134112 cccgctcaacccc 134100 Score = 135 bits (68), Expect = 3e-28 Identities = 77/80 (96%) Strand = Plus / Minus Query: 252 cgcaggcccagccgcccgcgctcgacctcgccgagcaacccaaggccatgagccacgcgc 311 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133987 cgcaggcccagccgcccgcgctcgacctcgccgagcatcccaaggccatgagccacgcgc 133928 Query: 312 tcatcctcgctgccaagaag 331 || ||||||| ||||||||| Sbjct: 133927 tcgtcctcgccgccaagaag 133908 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 330 agtttgatgctcttgttgcggcattgccactgtcatcagaagaggatcagttgaaaagaa 389 ||||||||||||||||| | || |||||||| ||||| |||||||||||| ||||||||| Sbjct: 133388 agtttgatgctcttgtttctgcgttgccactatcatctgaagaggatcagctgaaaagaa 133329 Query: 390 ttcaagagctacagg 404 || |||||||||||| Sbjct: 133328 ttaaagagctacagg 133314