BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst008k17 (947 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245258.1| Zea mays clone 14073 mRNA sequence 252 2e-63 gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D p... 252 2e-63 gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleos... 252 2e-63 gb|AY108096.1| Zea mays PCO136722 mRNA sequence 252 2e-63 ref|NM_001067293.1| Oryza sativa (japonica cultivar-group) Os08g... 159 2e-35 >gb|DQ245258.1| Zea mays clone 14073 mRNA sequence Length = 899 Score = 252 bits (127), Expect = 2e-63 Identities = 184/203 (90%) Strand = Plus / Plus Query: 404 gccttcttcctcttcatggctgacttcaggaaggagtacaaggccgcccatcccgactcc 463 ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||| | Sbjct: 356 gccttcttcctcttcatggacgacttcaggaaggagttcaaggccacccatcctgacaac 415 Query: 464 aagaatgttgccgccgttgcaaaggaaggaggggagaggtggaagtccatgaccgacgag 523 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 416 aagagtgtcgccaccgttgcaaaggaaggaggggagaggtggaagtccatgacagacgag 475 Query: 524 gagaagaagccttacttggacaaggccgcggagctcaaggctcagtacgagaatggggag 583 ||||||||||||||| | || ||||||||||||||||||||| || ||||||||| ||| Sbjct: 476 gagaagaagccttacattgaaaaggccgcggagctcaaggctgaggccgagaatggcgag 535 Query: 584 ggcagtggtgagaacaaggttgc 606 ||||||||||||||||| ||||| Sbjct: 536 ggcagtggtgagaacaatgttgc 558 Score = 188 bits (95), Expect = 3e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 135 ccgtcctcaagcgcgcccgcgacggcagcgccttcaccagatgcgaggcctgcaacaaga 194 |||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||| Sbjct: 123 ccgtcctcaagcgctccagggacgggagcgccttcaccagatgcgaggcctgcaacaagg 182 Query: 195 acgtccccgtcgtcctcatcgacatgcacagctgcagcctcgactccaagatccgcatga 254 | |||||||||||||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 183 atgtccccgtcgtcctcatcgacatgcacagctgcagcctcgacgagaagatcaggatga 242 Query: 255 acctcgaggcgcaggtcgtggagaaggccgtcgag 289 ||||||||||||||||| |||||| |||||||| Sbjct: 243 cgctcgaggcgcaggtcgtcgagaagaccgtcgag 277 >gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106 (nfd106) mRNA, complete cds Length = 625 Score = 252 bits (127), Expect = 2e-63 Identities = 184/203 (90%) Strand = Plus / Plus Query: 404 gccttcttcctcttcatggctgacttcaggaaggagtacaaggccgcccatcccgactcc 463 ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||| | Sbjct: 136 gccttcttcctcttcatggacgacttcaggaaggagttcaaggccacccatcctgacaac 195 Query: 464 aagaatgttgccgccgttgcaaaggaaggaggggagaggtggaagtccatgaccgacgag 523 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 196 aagagtgtcgccaccgttgcaaaggaaggaggggagaggtggaagtccatgacagacgag 255 Query: 524 gagaagaagccttacttggacaaggccgcggagctcaaggctcagtacgagaatggggag 583 ||||||||||||||| | || ||||||||||||||||||||| || ||||||||| ||| Sbjct: 256 gagaagaagccttacattgaaaaggccgcggagctcaaggctgaggccgagaatggcgag 315 Query: 584 ggcagtggtgagaacaaggttgc 606 ||||||||||||||||| ||||| Sbjct: 316 ggcagtggtgagaacaatgttgc 338 >gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly factor D (nfd106) mRNA, complete cds Length = 655 Score = 252 bits (127), Expect = 2e-63 Identities = 184/203 (90%) Strand = Plus / Plus Query: 404 gccttcttcctcttcatggctgacttcaggaaggagtacaaggccgcccatcccgactcc 463 ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||| | Sbjct: 138 gccttcttcctcttcatggacgacttcaggaaggagttcaaggccacccatcctgacaac 197 Query: 464 aagaatgttgccgccgttgcaaaggaaggaggggagaggtggaagtccatgaccgacgag 523 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 198 aagagtgtcgccaccgttgcaaaggaaggaggggagaggtggaagtccatgacagacgag 257 Query: 524 gagaagaagccttacttggacaaggccgcggagctcaaggctcagtacgagaatggggag 583 ||||||||||||||| | || ||||||||||||||||||||| || ||||||||| ||| Sbjct: 258 gagaagaagccttacattgaaaaggccgcggagctcaaggctgaggccgagaatggcgag 317 Query: 584 ggcagtggtgagaacaaggttgc 606 ||||||||||||||||| ||||| Sbjct: 318 ggcagtggtgagaacaatgttgc 340 >gb|AY108096.1| Zea mays PCO136722 mRNA sequence Length = 882 Score = 252 bits (127), Expect = 2e-63 Identities = 184/203 (90%) Strand = Plus / Plus Query: 404 gccttcttcctcttcatggctgacttcaggaaggagtacaaggccgcccatcccgactcc 463 ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||| | Sbjct: 352 gccttcttcctcttcatggacgacttcaggaaggagttcaaggccacccatcctgacaac 411 Query: 464 aagaatgttgccgccgttgcaaaggaaggaggggagaggtggaagtccatgaccgacgag 523 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 412 aagagtgtcgccaccgttgcaaaggaaggaggggagaggtggaagtccatgacagacgag 471 Query: 524 gagaagaagccttacttggacaaggccgcggagctcaaggctcagtacgagaatggggag 583 ||||||||||||||| | || ||||||||||||||||||||| || ||||||||| ||| Sbjct: 472 gagaagaagccttacattgaaaaggccgcggagctcaaggctgaggccgagaatggcgag 531 Query: 584 ggcagtggtgagaacaaggttgc 606 ||||||||||||||||| ||||| Sbjct: 532 ggcagtggtgagaacaatgttgc 554 Score = 188 bits (95), Expect = 3e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 135 ccgtcctcaagcgcgcccgcgacggcagcgccttcaccagatgcgaggcctgcaacaaga 194 |||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||| Sbjct: 119 ccgtcctcaagcgctccagggacgggagcgccttcaccagatgcgaggcctgcaacaagg 178 Query: 195 acgtccccgtcgtcctcatcgacatgcacagctgcagcctcgactccaagatccgcatga 254 | |||||||||||||||||||||||||||||||||||||||||| |||||| | |||| Sbjct: 179 atgtccccgtcgtcctcatcgacatgcacagctgcagcctcgacgagaagatcaggatga 238 Query: 255 acctcgaggcgcaggtcgtggagaaggccgtcgag 289 ||||||||||||||||| |||||| |||||||| Sbjct: 239 cgctcgaggcgcaggtcgtcgagaagaccgtcgag 273 >ref|NM_001067293.1| Oryza sativa (japonica cultivar-group) Os08g0101100 (Os08g0101100) mRNA, complete cds Length = 1016 Score = 159 bits (80), Expect = 2e-35 Identities = 185/220 (84%) Strand = Plus / Plus Query: 386 ggcaagcgcccacagactgccttcttcctcttcatggctgacttcaggaaggagtacaag 445 ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 313 ggcaagcgcccacccactgcctttttcctcttcatgagtgacttcaggaaggagtacaag 372 Query: 446 gccgcccatcccgactccaagaatgttgccgccgttgcaaaggaaggaggggagaggtgg 505 || | || || ||| ||||| || |||| || || ||||||||||||||||||||| Sbjct: 373 gcggagcaccctgacaacaagagcgtctccgctgtcgccaaggaaggaggggagaggtgg 432 Query: 506 aagtccatgaccgacgaggagaagaagccttacttggacaaggccgcggagctcaaggct 565 || |||||| | |||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 433 aaatccatgtctgacgaggacaagaagccttacttggacaaggctgcagagctcaaggcc 492 Query: 566 cagtacgagaatggggagggcagtggtgagaacaaggttg 605 ||||| | ||||| ||| |||| | |||||||| |||| Sbjct: 493 gagtaccacaatggcgagcgcagcgacgagaacaatgttg 532 Score = 157 bits (79), Expect = 1e-34 Identities = 136/155 (87%) Strand = Plus / Plus Query: 131 tccgccgtcctcaagcgcgcccgcgacggcagcgccttcaccagatgcgaggcctgcaac 190 ||||||||||| |||||||| ||||||||||||||||||||| | |||||||| ||| | Sbjct: 91 tccgccgtcctgaagcgcgcgcgcgacggcagcgccttcacccgctgcgaggcttgcggc 150 Query: 191 aagaacgtccccgtcgtcctcatcgacatgcacagctgcagcctcgactccaagatccgc 250 |||| |||| |||| ||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 151 aagagcgtctccgtggtcctcatcgacatgcacaactgcagcctcgacgacaagatccgc 210 Query: 251 atgaacctcgaggcgcaggtcgtggagaaggccgt 285 || | ||| ||||| ||||| |||||| ||||||| Sbjct: 211 atcagcctagaggctcaggtggtggagcaggccgt 245