BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst008j14 (959 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835529.1| Oryza sativa (indica cultivar-group) cDNA clone:... 250 9e-63 ref|NM_001073255.1| Oryza sativa (japonica cultivar-group) Os12g... 250 9e-63 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 204 5e-49 emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa... 204 5e-49 >emb|CT835529.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA050C07, full insert sequence Length = 836 Score = 250 bits (126), Expect = 9e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 184 ccggcggccgcccagggcacgccggcagcgtctccggcgccgccgtacaagaaccacacg 243 |||||||| | ||||||| ||||| | | ||| ||||||||||||||||||||||||||| Sbjct: 110 ccggcggctggccagggcgcgccgtcggggtcgccggcgccgccgtacaagaaccacacg 169 Query: 244 gtggccggcgccgccgggtggttcttcaacgcaacgagcaactcgacgtccggcaactac 303 ||||||||||||| |||||||||||||||||| ||||||||| | || |||||||||||| Sbjct: 170 gtggccggcgccgacgggtggttcttcaacgcgacgagcaacaccacctccggcaactac 229 Query: 304 tcgtcgtgggccgccaccgagaccttctacctcggcgactacctcatattcaagacgaac 363 || ||||||||| |||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 230 tccgactgggccgccggcgagaccttctatctcggcgactacctcatcttcaagacggac 289 Query: 364 gacaactcgtcggtggtgcacacctccaacgccaccacctactcgctctgcgac 417 |||| |||||||||||| || || || ||||||||| ||||||||||||||||| Sbjct: 290 gacagctcgtcggtggttcagacgtcgaacgccaccgcctactcgctctgcgac 343 Score = 196 bits (99), Expect = 1e-46 Identities = 162/183 (88%) Strand = Plus / Plus Query: 497 ccatcaccatcccgctcaccttcgagggcgcaaactacttcttctccgacgccgacggcg 556 ||||| || ||||||||||| |||||||||| ||||||||||||||||| |||| || || Sbjct: 417 ccatcgccgtcccgctcaccgtcgagggcgccaactacttcttctccgaagccggcgacg 476 Query: 557 gcgcgcagtgcgagcagggcatgcgcttcgagatcaaggtcgcccacggccgcggcctgc 616 | |||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 477 gtgcgcagtgcgaggaagggatgcggttcgagatcaaggtcgcccacggccgcggcctgc 536 Query: 617 cgcccgcgctcgcgcacccgccgccggcgcccaagtggcgcgtgcttgcgccgccgcccg 676 |||| | |||||||||||||||||| |||| ||| |||||| || ||||||||||||| Sbjct: 537 cgccggacctcgcgcacccgccgccgccgccgaagccgcgcgtcctcgcgccgccgcccg 596 Query: 677 acg 679 ||| Sbjct: 597 acg 599 >ref|NM_001073255.1| Oryza sativa (japonica cultivar-group) Os12g0454600 (Os12g0454600) mRNA, complete cds Length = 705 Score = 250 bits (126), Expect = 9e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 184 ccggcggccgcccagggcacgccggcagcgtctccggcgccgccgtacaagaaccacacg 243 |||||||| | ||||||| ||||| | | ||| ||||||||||||||||||||||||||| Sbjct: 70 ccggcggctggccagggcgcgccgtcggggtcgccggcgccgccgtacaagaaccacacg 129 Query: 244 gtggccggcgccgccgggtggttcttcaacgcaacgagcaactcgacgtccggcaactac 303 ||||||||||||| |||||||||||||||||| ||||||||| | || |||||||||||| Sbjct: 130 gtggccggcgccgacgggtggttcttcaacgcgacgagcaacaccacctccggcaactac 189 Query: 304 tcgtcgtgggccgccaccgagaccttctacctcggcgactacctcatattcaagacgaac 363 || ||||||||| |||||||||||| ||||||||||||||||| ||||||||| || Sbjct: 190 tccgactgggccgccggcgagaccttctatctcggcgactacctcatcttcaagacggac 249 Query: 364 gacaactcgtcggtggtgcacacctccaacgccaccacctactcgctctgcgac 417 |||| |||||||||||| || || || ||||||||| ||||||||||||||||| Sbjct: 250 gacagctcgtcggtggttcagacgtcgaacgccaccgcctactcgctctgcgac 303 Score = 204 bits (103), Expect = 5e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 497 ccatcaccatcccgctcaccttcgagggcgcaaactacttcttctccgacgccgacggcg 556 ||||| || ||||||||||| |||||||||| ||||||||||||||||| |||| || || Sbjct: 377 ccatcgccgtcccgctcaccgtcgagggcgccaactacttcttctccgaagccggcgacg 436 Query: 557 gcgcgcagtgcgagcagggcatgcgcttcgagatcaaggtcgcccacggccgcggcctgc 616 |||||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 437 gcgcgcagtgcgaggaagggatgcggttcgagatcaaggtcgcccacggccgcggcctgc 496 Query: 617 cgcccgcgctcgcgcacccgccgccggcgcccaagtggcgcgtgcttgcgccgccgcccg 676 |||| | |||||||||||||||||| |||| ||| |||||| || ||||||||||||| Sbjct: 497 cgccggacctcgcgcacccgccgccgccgccgaagccgcgcgtcctcgcgccgccgcccg 556 Query: 677 acg 679 ||| Sbjct: 557 acg 559 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 204 bits (103), Expect = 5e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 497 ccatcaccatcccgctcaccttcgagggcgcaaactacttcttctccgacgccgacggcg 556 ||||| || ||||||||||| |||||||||| ||||||||||||||||| |||| || || Sbjct: 15805426 ccatcgccgtcccgctcaccgtcgagggcgccaactacttcttctccgaagccggcgacg 15805485 Query: 557 gcgcgcagtgcgagcagggcatgcgcttcgagatcaaggtcgcccacggccgcggcctgc 616 |||||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 15805486 gcgcgcagtgcgaggaagggatgcggttcgagatcaaggtcgcccacggccgcggcctgc 15805545 Query: 617 cgcccgcgctcgcgcacccgccgccggcgcccaagtggcgcgtgcttgcgccgccgcccg 676 |||| | |||||||||||||||||| |||| ||| |||||| || ||||||||||||| Sbjct: 15805546 cgccggacctcgcgcacccgccgccgccgccgaagccgcgcgtcctcgcgccgccgcccg 15805605 Query: 677 acg 679 ||| Sbjct: 15805606 acg 15805608 Score = 178 bits (90), Expect = 3e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 184 ccggcggccgcccagggcacgccggcagcgtctccggcgccgccgtacaagaaccacacg 243 |||||||| | ||||||| ||||| | | ||| ||||||||||||||||||||||||||| Sbjct: 15804119 ccggcggctggccagggcgcgccgtcggggtcgccggcgccgccgtacaagaaccacacg 15804178 Query: 244 gtggccggcgccgccgggtggttcttcaacgcaacgagcaactcgacgtccggcaactac 303 ||||||||||||| |||||||||||||||||| ||||||||| | || |||||||||||| Sbjct: 15804179 gtggccggcgccgacgggtggttcttcaacgcgacgagcaacaccacctccggcaactac 15804238 Query: 304 tcgtcgtgggccgccaccgagaccttctacctcggcgactacctca 349 || ||||||||| |||||||||||| |||||||||||||||| Sbjct: 15804239 tccgactgggccgccggcgagaccttctatctcggcgactacctca 15804284 >emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 204 bits (103), Expect = 5e-49 Identities = 163/183 (89%) Strand = Plus / Minus Query: 497 ccatcaccatcccgctcaccttcgagggcgcaaactacttcttctccgacgccgacggcg 556 ||||| || ||||||||||| |||||||||| ||||||||||||||||| |||| || || Sbjct: 20229 ccatcgccgtcccgctcaccgtcgagggcgccaactacttcttctccgaagccggcgacg 20170 Query: 557 gcgcgcagtgcgagcagggcatgcgcttcgagatcaaggtcgcccacggccgcggcctgc 616 |||||||||||||| | || ||||| |||||||||||||||||||||||||||||||||| Sbjct: 20169 gcgcgcagtgcgaggaagggatgcggttcgagatcaaggtcgcccacggccgcggcctgc 20110 Query: 617 cgcccgcgctcgcgcacccgccgccggcgcccaagtggcgcgtgcttgcgccgccgcccg 676 |||| | |||||||||||||||||| |||| ||| |||||| || ||||||||||||| Sbjct: 20109 cgccggacctcgcgcacccgccgccgccgccgaagccgcgcgtcctcgcgccgccgcccg 20050 Query: 677 acg 679 ||| Sbjct: 20049 acg 20047 Score = 178 bits (90), Expect = 3e-41 Identities = 147/166 (88%) Strand = Plus / Minus Query: 184 ccggcggccgcccagggcacgccggcagcgtctccggcgccgccgtacaagaaccacacg 243 |||||||| | ||||||| ||||| | | ||| ||||||||||||||||||||||||||| Sbjct: 21536 ccggcggctggccagggcgcgccgtcggggtcgccggcgccgccgtacaagaaccacacg 21477 Query: 244 gtggccggcgccgccgggtggttcttcaacgcaacgagcaactcgacgtccggcaactac 303 ||||||||||||| |||||||||||||||||| ||||||||| | || |||||||||||| Sbjct: 21476 gtggccggcgccgacgggtggttcttcaacgcgacgagcaacaccacctccggcaactac 21417 Query: 304 tcgtcgtgggccgccaccgagaccttctacctcggcgactacctca 349 || ||||||||| |||||||||||| |||||||||||||||| Sbjct: 21416 tccgactgggccgccggcgagaccttctatctcggcgactacctca 21371