BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst008c01
         (743 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001054316.1| Oryza sativa (japonica cultivar-group) Os02g...   329   9e-87
dbj|AK066093.1| Oryza sativa (japonica cultivar-group) cDNA clon...   329   9e-87
gb|AY108269.1| Zea mays PCO099515 mRNA sequence                       262   2e-66
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   137   7e-29
dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D...   137   7e-29

>ref|NM_001054316.1| Oryza sativa (japonica cultivar-group) Os02g0688900 (Os02g0688900)
            mRNA, complete cds
          Length = 1611

 Score =  329 bits (166), Expect = 9e-87
 Identities = 205/218 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    tttgccaatgaattagcagagatgcaattcaccttcttcttgtttttcggatatattgga 60
            ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1155 tttgctaatgaattagcagagatgcaattcactttcttcttgttttttggatatatcgga 1214

                                                                        
Query: 61   gtctctctccttagccctgttatgcacaacctatggatctggaggggcactggtaacgca 120
            |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| || |||
Sbjct: 1215 gtctctctccttagccctgtcatgcacaacctgtggatctggagggggactggcaatgca 1274

                                                                        
Query: 121  aatttctactttgccaccggtttggcttatacttgtcttcagaccgtgttggttgtagag 180
            ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1275 aatttctactttgccactggtttggcttacacttgccttcagaccgtgttggttgtagag 1334

                                                  
Query: 181  agtgtaagttcaatgataaaacatgacaggaagctaag 218
            |||||||||||||||||||| |||||||||||||||||
Sbjct: 1335 agtgtaagttcaatgataaagcatgacaggaagctaag 1372


>dbj|AK066093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O06, full
            insert sequence
          Length = 1612

 Score =  329 bits (166), Expect = 9e-87
 Identities = 205/218 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1    tttgccaatgaattagcagagatgcaattcaccttcttcttgtttttcggatatattgga 60
            ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1156 tttgctaatgaattagcagagatgcaattcactttcttcttgttttttggatatatcgga 1215

                                                                        
Query: 61   gtctctctccttagccctgttatgcacaacctatggatctggaggggcactggtaacgca 120
            |||||||||||||||||||| ||||||||||| |||||||||||||| ||||| || |||
Sbjct: 1216 gtctctctccttagccctgtcatgcacaacctgtggatctggagggggactggcaatgca 1275

                                                                        
Query: 121  aatttctactttgccaccggtttggcttatacttgtcttcagaccgtgttggttgtagag 180
            ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1276 aatttctactttgccactggtttggcttacacttgccttcagaccgtgttggttgtagag 1335

                                                  
Query: 181  agtgtaagttcaatgataaaacatgacaggaagctaag 218
            |||||||||||||||||||| |||||||||||||||||
Sbjct: 1336 agtgtaagttcaatgataaagcatgacaggaagctaag 1373


>gb|AY108269.1| Zea mays PCO099515 mRNA sequence
          Length = 828

 Score =  262 bits (132), Expect = 2e-66
 Identities = 201/224 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgccaatgaattagcagagatgcaattcaccttcttcttgtttttcggatatattgga 60
           |||| ||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 274 tttgtcaacgaattagcagaaatgcagttcacattcttcttgttttttggatatattgga 333

                                                                       
Query: 61  gtctctctccttagccctgttatgcacaacctatggatctggaggggcactggtaacgca 120
           ||||| || ||||||||||| ||||| || || ||||||||||||||||||||||| |||
Sbjct: 334 gtctccctacttagccctgtcatgcataatctgtggatctggaggggcactggtaatgca 393

                                                                       
Query: 121 aatttctactttgccaccggtttggcttatacttgtcttcagaccgtgttggttgtagag 180
           ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| | ||||||
Sbjct: 394 aatttctacttcgccactggtttggcttatacttgccttcagactgtgttgctggtagag 453

                                                       
Query: 181 agtgtaagttcaatgataaaacatgacaggaagctaaggctact 224
           |||||||||||||||||||| || ||||| ||| ||||||||||
Sbjct: 454 agtgtaagttcaatgataaagcacgacagaaagttaaggctact 497


>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  137 bits (69), Expect = 7e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                            
Query: 18       agagatgcaattcaccttcttcttgtttttcggatatattggagtctctctccttagccc 77
                ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 28271876 agagatgcaattcactttcttcttgttttttggatatatcggagtctctctccttagccc 28271817

                                             
Query: 78       tgttatgcacaacctatggatctggaggg 106
                ||| ||||||||||| |||||||||||||
Sbjct: 28271816 tgtcatgcacaacctgtggatctggaggg 28271788



 Score =  109 bits (55), Expect = 2e-20
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                           
Query: 160      cagaccgtgttggttgtagagagtgtaagttcaatgataaaacatgacaggaagctaag 218
                ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 28271462 cagaccgtgttggttgtagagagtgtaagttcaatgataaagcatgacaggaagctaag 28271404


>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1743_B12
          Length = 175645

 Score =  137 bits (69), Expect = 7e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 18    agagatgcaattcaccttcttcttgtttttcggatatattggagtctctctccttagccc 77
             ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 63633 agagatgcaattcactttcttcttgttttttggatatatcggagtctctctccttagccc 63574

                                          
Query: 78    tgttatgcacaacctatggatctggaggg 106
             ||| ||||||||||| |||||||||||||
Sbjct: 63573 tgtcatgcacaacctgtggatctggaggg 63545



 Score =  109 bits (55), Expect = 2e-20
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                        
Query: 160   cagaccgtgttggttgtagagagtgtaagttcaatgataaaacatgacaggaagctaag 218
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63219 cagaccgtgttggttgtagagagtgtaagttcaatgataaagcatgacaggaagctaag 63161