BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007n11 (1012 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070096.1| Oryza sativa (japonica cultivar-group) Os09g... 309 1e-80 dbj|AK100566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 1e-80 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 307 5e-80 >ref|NM_001070096.1| Oryza sativa (japonica cultivar-group) Os09g0497600 (Os09g0497600) mRNA, complete cds Length = 2400 Score = 309 bits (156), Expect = 1e-80 Identities = 215/234 (91%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 160 cagccttatgacagacagaagtgatggaccaattggtaggctccctgaacatcttcttgt 219 |||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||| Sbjct: 164 cagccttatgacagacagga---atggaccatttggtaggctccctgaacatctccttgt 220 Query: 220 agaaatattcattcggttaccagtctgcgagtgggttcaaatatcatgtgtcagcaagca 279 ||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 221 agaaatatttatccggttaccaacatgcgaatgggttcaaatatcatgtgtcagcaagca 280 Query: 280 ctgggcaagcatatttcgaggagaatgcttgtggcaaagcgctattgcaaggaactggcc 339 ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| Sbjct: 281 ctgggcaagcatatttcaaggagaatgtatgtggcaaactgctattgcaaggaactggcc 340 Query: 340 atcagctggtttccagaaacgctggcctgggccaattcccagaggttctgctag 393 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 341 atcagctggtttacggaaacgctggcctgggccaattcccagaggttctgctag 394 Score = 240 bits (121), Expect = 9e-60 Identities = 181/201 (90%) Strand = Plus / Plus Query: 683 tttttccttccatttccatattccagatcatataaagtactgtggagggtgtttgacaag 742 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||| Sbjct: 1943 tttttccttccattcccatactccagatcatataaagtcttgtggagggtgttcgacaag 2002 Query: 743 ctgttcaccgacttccgtgactgtttcagccgggtggattaccatgatgcgctagcgagt 802 ||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| || Sbjct: 2003 ctgttcaccgacttccgtgactgcttcagccgaggggattaccatgatgcactagcgggt 2062 Query: 803 gccaaatctaggtttcagccagtaccttttacatggcttggccattaacgcacagttgtt 862 ||||| |||||||||||||||||||| | | ||||||||||||| | ||| |||||| | Sbjct: 2063 gccaagtctaggtttcagccagtaccatctgcatggcttggccactgacgagcagttgct 2122 Query: 863 gttcttgttgtgcactgcaca 883 | ||||||||||||||||||| Sbjct: 2123 gctcttgttgtgcactgcaca 2143 Score = 218 bits (110), Expect = 3e-53 Identities = 131/138 (94%) Strand = Plus / Plus Query: 545 gatcagttcattgcttgtggtaggacaggagaaaaggcccatgaacttgcttcgaagata 604 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1497 gatcagttcattgcttgtggtaggacaggagaaaaggcacatgaacttgcttcaaagata 1556 Query: 605 tggcttgcagtaattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacat 664 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1557 tggcttgcagttattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacac 1616 Query: 665 ctcgcgcaagaaggagaa 682 || | |||||||||||| Sbjct: 1617 ctttctcaagaaggagaa 1634 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 395 aggagattccaagcattatatctcagtgagaaccttgtcccatctggtggggagattgat 454 |||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||| Sbjct: 783 aggagattccaagcattatacgtcagccagaaccttgtctcatctggtggggatattgat 842 Query: 455 gagcttgttggtcacacttatctctatttaaaagaacagtttgagcgccctaccattcct 514 || |||||||| ||||||||||||||||| ||||||||| |||||||||| || || Sbjct: 843 gaacttgttggccacacttatctctatttgaaagaacagcttgagcgcccagttgttgct 902 Query: 515 ccttccagcattcttcatggcaccatcat 543 ||||||||||| || |||||||||||||| Sbjct: 903 ccttccagcatactccatggcaccatcat 931 >dbj|AK100566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104K05, full insert sequence Length = 2400 Score = 309 bits (156), Expect = 1e-80 Identities = 215/234 (91%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 160 cagccttatgacagacagaagtgatggaccaattggtaggctccctgaacatcttcttgt 219 |||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||| Sbjct: 165 cagccttatgacagacagga---atggaccatttggtaggctccctgaacatctccttgt 221 Query: 220 agaaatattcattcggttaccagtctgcgagtgggttcaaatatcatgtgtcagcaagca 279 ||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 222 agaaatatttatccggttaccaacatgcgaatgggttcaaatatcatgtgtcagcaagca 281 Query: 280 ctgggcaagcatatttcgaggagaatgcttgtggcaaagcgctattgcaaggaactggcc 339 ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| Sbjct: 282 ctgggcaagcatatttcaaggagaatgtatgtggcaaactgctattgcaaggaactggcc 341 Query: 340 atcagctggtttccagaaacgctggcctgggccaattcccagaggttctgctag 393 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 342 atcagctggtttacggaaacgctggcctgggccaattcccagaggttctgctag 395 Score = 240 bits (121), Expect = 9e-60 Identities = 181/201 (90%) Strand = Plus / Plus Query: 683 tttttccttccatttccatattccagatcatataaagtactgtggagggtgtttgacaag 742 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||| Sbjct: 1943 tttttccttccattcccatactccagatcatataaagtcttgtggagggtgttcgacaag 2002 Query: 743 ctgttcaccgacttccgtgactgtttcagccgggtggattaccatgatgcgctagcgagt 802 ||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| || Sbjct: 2003 ctgttcaccgacttccgtgactgcttcagccgaggggattaccatgatgcactagcgggt 2062 Query: 803 gccaaatctaggtttcagccagtaccttttacatggcttggccattaacgcacagttgtt 862 ||||| |||||||||||||||||||| | | ||||||||||||| | ||| |||||| | Sbjct: 2063 gccaagtctaggtttcagccagtaccatctgcatggcttggccactgacgagcagttgct 2122 Query: 863 gttcttgttgtgcactgcaca 883 | ||||||||||||||||||| Sbjct: 2123 gctcttgttgtgcactgcaca 2143 Score = 218 bits (110), Expect = 3e-53 Identities = 131/138 (94%) Strand = Plus / Plus Query: 545 gatcagttcattgcttgtggtaggacaggagaaaaggcccatgaacttgcttcgaagata 604 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1498 gatcagttcattgcttgtggtaggacaggagaaaaggcacatgaacttgcttcaaagata 1557 Query: 605 tggcttgcagtaattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacat 664 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1558 tggcttgcagttattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacac 1617 Query: 665 ctcgcgcaagaaggagaa 682 || | |||||||||||| Sbjct: 1618 ctttctcaagaaggagaa 1635 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Plus Query: 395 aggagattccaagcattatatctcagtgagaaccttgtcccatctggtggggagattgat 454 |||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||| Sbjct: 784 aggagattccaagcattatacgtcagccagaaccttgtctcatctggtggggatattgat 843 Query: 455 gagcttgttggtcacacttatctctatttaaaagaacagtttgagcgccctaccattcct 514 || |||||||| ||||||||||||||||| ||||||||| |||||||||| || || Sbjct: 844 gaacttgttggccacacttatctctatttgaaagaacagcttgagcgcccagttgttgct 903 Query: 515 ccttccagcattcttcatggcaccatcat 543 ||||||||||| || |||||||||||||| Sbjct: 904 ccttccagcatactccatggcaccatcat 932 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 307 bits (155), Expect = 5e-80 Identities = 214/233 (91%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 161 agccttatgacagacagaagtgatggaccaattggtaggctccctgaacatcttcttgta 220 ||||||||||||||||| | |||||||| |||||||||||||||||||||| |||||| Sbjct: 18951970 agccttatgacagacagga---atggaccatttggtaggctccctgaacatctccttgta 18951914 Query: 221 gaaatattcattcggttaccagtctgcgagtgggttcaaatatcatgtgtcagcaagcac 280 |||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 18951913 gaaatatttatccggttaccaacatgcgaatgggttcaaatatcatgtgtcagcaagcac 18951854 Query: 281 tgggcaagcatatttcgaggagaatgcttgtggcaaagcgctattgcaaggaactggcca 340 |||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 18951853 tgggcaagcatatttcaaggagaatgtatgtggcaaactgctattgcaaggaactggcca 18951794 Query: 341 tcagctggtttccagaaacgctggcctgggccaattcccagaggttctgctag 393 ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 18951793 tcagctggtttacggaaacgctggcctgggccaattcccagaggttctgctag 18951741 Score = 240 bits (121), Expect = 9e-60 Identities = 181/201 (90%) Strand = Plus / Minus Query: 683 tttttccttccatttccatattccagatcatataaagtactgtggagggtgtttgacaag 742 |||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||| Sbjct: 18950192 tttttccttccattcccatactccagatcatataaagtcttgtggagggtgttcgacaag 18950133 Query: 743 ctgttcaccgacttccgtgactgtttcagccgggtggattaccatgatgcgctagcgagt 802 ||||||||||||||||||||||| |||||||| | ||||||||||||||| |||||| || Sbjct: 18950132 ctgttcaccgacttccgtgactgcttcagccgaggggattaccatgatgcactagcgggt 18950073 Query: 803 gccaaatctaggtttcagccagtaccttttacatggcttggccattaacgcacagttgtt 862 ||||| |||||||||||||||||||| | | ||||||||||||| | ||| |||||| | Sbjct: 18950072 gccaagtctaggtttcagccagtaccatctgcatggcttggccactgacgagcagttgct 18950013 Query: 863 gttcttgttgtgcactgcaca 883 | ||||||||||||||||||| Sbjct: 18950012 gctcttgttgtgcactgcaca 18949992 Score = 218 bits (110), Expect = 3e-53 Identities = 131/138 (94%) Strand = Plus / Minus Query: 545 gatcagttcattgcttgtggtaggacaggagaaaaggcccatgaacttgcttcgaagata 604 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 18950638 gatcagttcattgcttgtggtaggacaggagaaaaggcacatgaacttgcttcaaagata 18950579 Query: 605 tggcttgcagtaattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacat 664 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18950578 tggcttgcagttattgacaacttggaagaaaaccagcaaactttcttgctgttaaaacac 18950519 Query: 665 ctcgcgcaagaaggagaa 682 || | |||||||||||| Sbjct: 18950518 ctttctcaagaaggagaa 18950501 Score = 153 bits (77), Expect = 2e-33 Identities = 131/149 (87%) Strand = Plus / Minus Query: 395 aggagattccaagcattatatctcagtgagaaccttgtcccatctggtggggagattgat 454 |||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||| Sbjct: 18951352 aggagattccaagcattatacgtcagccagaaccttgtctcatctggtggggatattgat 18951293 Query: 455 gagcttgttggtcacacttatctctatttaaaagaacagtttgagcgccctaccattcct 514 || |||||||| ||||||||||||||||| ||||||||| |||||||||| || || Sbjct: 18951292 gaacttgttggccacacttatctctatttgaaagaacagcttgagcgcccagttgttgct 18951233 Query: 515 ccttccagcattcttcatggcaccatcat 543 ||||||||||| || |||||||||||||| Sbjct: 18951232 ccttccagcatactccatggcaccatcat 18951204