BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007k07 (565 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA,... 180 4e-42 gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyub... 170 4e-39 ref|NM_001064913.1| Oryza sativa (japonica cultivar-group) Os06g... 167 6e-38 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38 emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin 167 6e-38 >gb|AF148448.1|AF148448 Sporobolus stapfianus polyubiquitin mRNA, complete cds Length = 1423 Score = 180 bits (91), Expect = 4e-42 Identities = 139/153 (90%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 257 ctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac- 315 |||||||||||||||||||||||||||||||| ||| || |||| || ||||| ||||| Sbjct: 276 ctcaggctcaggggaggcatgcagatcttcgtgaagaccctcaccggcaagaccatcacg 335 Query: 316 --tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggag 373 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 336 cttgaggtggagtcctcggacaccatcgacaacgtgaaggccaagatccaggacaaggag 395 Query: 374 ggca-tcccccggatcaacagcgtctcatcttc 405 |||| ||||||||| || ||||||||||||||| Sbjct: 396 ggcattcccccggaccagcagcgtctcatcttc 428 Score = 165 bits (83), Expect = 2e-37 Identities = 137/153 (89%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 257 ctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac- 315 |||||||||||||| |||||||||||||| || ||| || |||| || ||||| ||||| Sbjct: 732 ctcaggctcaggggtggcatgcagatctttgtgaagaccctcaccggcaagaccatcacc 791 Query: 316 --tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggag 373 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 792 cttgaggtggagtcctcggacaccatcgacaacgtgaaggccaagatccaggacaaggag 851 Query: 374 ggcat-cccccggatcaacagcgtctcatcttc 405 ||||| |||||||| || ||||||||||||||| Sbjct: 852 ggcatccccccggaccagcagcgtctcatcttc 884 Score = 159 bits (80), Expect = 1e-35 Identities = 134/150 (89%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 260 aggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac---t 316 ||||||||||| ||||||||||||||||| ||| || |||| || ||||| ||||| | Sbjct: 507 aggctcaggggtggcatgcagatcttcgtgaagaccctcaccggcaagaccatcacgctt 566 Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct: 567 gaggtggagtcctcggacaccatcgacaacgtgaaggccaagatccaggacaaggaaggc 626 Query: 377 atccc-ccggatcaacagcgtctcatcttc 405 ||||| ||||| || ||||||||||||||| Sbjct: 627 atccctccggaccagcagcgtctcatcttc 656 Score = 109 bits (55), Expect = 1e-20 Identities = 127/149 (85%), Gaps = 4/149 (2%) Strand = Plus / Plus Query: 260 aggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcact--- 316 ||||||||||| ||||||||||| || |||||| || ||||||| ||||| ||||| Sbjct: 963 aggctcaggggtggcatgcagatttttgtcaagaccctcactggcaagaccatcaccctg 1022 Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||||||||| || |||||||| ||||| || ||||| ||||| ||||||||||||||| Sbjct: 1023 gaggtggagtcatctgacaccatcgacaatgttaaggcaaagatccaggacaaggagggc 1082 Query: 377 atccc-ccggatcaacagcgtctcatctt 404 ||||| ||||| || |||||||| ||||| Sbjct: 1083 atcccgccggaccagcagcgtctgatctt 1111 Score = 105 bits (53), Expect = 2e-19 Identities = 116/135 (85%), Gaps = 4/135 (2%) Strand = Plus / Plus Query: 275 atgcagatcttcgtcaaggccttcactgggaagacaatcact---gaggtggagtcctcg 331 |||||||||||||| ||| || |||| || ||||| ||||| ||||| ||||||||| Sbjct: 66 atgcagatcttcgtaaagaccctcaccggcaagaccatcaccctcgaggttgagtcctcg 125 Query: 332 gacaccattgacaacgtgaaggccaagatgcaggacaaggagggcat-cccccggatcaa 390 || |||||||||||||| ||||| ||||| |||||||||||||| || |||||||| || Sbjct: 126 gataccattgacaacgtcaaggcaaagatccaggacaaggagggaatccccccggaccag 185 Query: 391 cagcgtctcatcttc 405 ||||||||||||||| Sbjct: 186 cagcgtctcatcttc 200 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||||||| | ||||| ||||| |||||||||||| ||||||| |||||||||| Sbjct: 211 agcttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccacc 270 Query: 240 tcgtgctcaggctca 254 | || |||||||||| Sbjct: 271 ttgtcctcaggctca 285 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||||||| | ||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 439 agcttgaggacggccgtacccttgctgactacaacatccagaaggagtccaccctccacc 498 Query: 240 tcgtgctcaggctca 254 | || || ||||||| Sbjct: 499 tggtcctgaggctca 513 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||||||| | ||||| ||||| |||||||||||| ||||||| |||||||||| Sbjct: 667 agcttgaggacggccgtacccttgctgattacaacatccagaaggagtccaccctccacc 726 Query: 240 tcgtgctcaggctca 254 | || |||||||||| Sbjct: 727 ttgtcctcaggctca 741 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| ||||||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 895 agcttgaggatggccgcaccctcgccgactacaacatccagaaggagtccaccctccacc 954 Query: 240 tcgtgctcaggctca 254 |||| || ||||||| Sbjct: 955 tcgtcctgaggctca 969 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| |||||||||| || |||||||||||| ||||||| |||||||||| Sbjct: 1123 agctggaggatggccgcaccctggcggattacaacatccagaaggagtccaccctccacc 1182 Query: 240 tcgtgct 246 | ||||| Sbjct: 1183 tggtgct 1189 >gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 Score = 170 bits (86), Expect = 4e-39 Identities = 138/154 (89%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||| ||||| Sbjct: 4126 gctcaggctcaggggtggcatgcagatcttcgtcaagaccctcactggcaagaccatcac 4185 Query: 316 t---gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 4186 cttggaggtggagtcctcggacaccattgacaatgtgaaggcgaagatccaggacaagga 4245 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||| ||| Sbjct: 4246 gggcatccccccggaccagcagcgtctcatyttc 4279 Score = 131 bits (66), Expect = 3e-27 Identities = 130/150 (86%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||| ||||||||||||||||| ||||||||| || ||||||| ||||| ||||| Sbjct: 3898 gctcaggcttaggggaggcatgcagattttcgtcaagaccctcactggcaagactatcac 3957 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 3958 gcttgaggtcgagtcttctgacacgatcgacaacgtgaaggccaagatccaggacaagga 4017 Query: 373 gggcat-cccccggatcaacagcgtctcat 401 ||| || |||||||| || |||||| |||| Sbjct: 4018 gggaatccccccggaccagcagcgtytcat 4047 Score = 117 bits (59), Expect = 5e-23 Identities = 117/135 (86%), Gaps = 4/135 (2%) Strand = Plus / Plus Query: 275 atgcagatcttcgtcaaggccttcactgggaagacaatcact---gaggtggagtcctcg 331 |||||||| ||||||||| || |||| || ||||| ||||| |||||||||||||| Sbjct: 4601 atgcagatyttcgtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctct 4660 Query: 332 gacaccattgacaacgtgaaggccaagatgcaggacaaggagggcat-cccccggatcaa 390 |||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 4661 gacaccatcgacaatgtgaaggcgaagatccaggacaaggagggcatccccccggaccag 4720 Query: 391 cagcgtctcatcttc 405 ||||||||||||||| Sbjct: 4721 cagcgtctcatcttc 4735 Score = 99.6 bits (50), Expect = 1e-17 Identities = 97/112 (86%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 275 atgcagatcttcgtcaaggccttcactgggaagacaatcact---gaggtggagtcctcg 331 |||||||| ||||||||| || |||| || ||||| ||||| |||||||||||||| Sbjct: 4373 atgcagattttcgtcaagaccctcaccggcaagaccatcaccctggaggtggagtcctct 4432 Query: 332 gacaccattgacaacgtgaaggccaagatgcaggacaaggagggcatccccc 383 |||||||||||||| |||||||| ||||| ||||| |||||||||||||||| Sbjct: 4433 gacaccattgacaatgtgaaggcgaagatccaggataaggagggcatccccc 4484 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| ||||||| |||||||||||||||||| |||||||||| ||||||| Sbjct: 4062 agctcgaggatggccgcaccctcgctgactacaacatccagaaggagtcgactctccacc 4121 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 4122 ttgtgctcaggctca 4136 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| | ||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 3834 agctcgaggatggccgtaccctagctgactacaacatccagaaggagtccaccctccacc 3893 Query: 240 tcgtgctcaggct 252 | ||||||||||| Sbjct: 3894 tggtgctcaggct 3906 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| |||||||||| ||||||||||||||| ||||||| || ||||||| Sbjct: 4746 agctggaggatggccgcaccctggcagactacaacatccagaaggagtccactctccacc 4805 Query: 240 tcgtgctc 247 | |||||| Sbjct: 4806 tggtgctc 4813 >ref|NM_001064913.1| Oryza sativa (japonica cultivar-group) Os06g0681400 (Os06g0681400) mRNA, complete cds Length = 1660 Score = 167 bits (84), Expect = 6e-38 Identities = 138/154 (89%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 264 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 323 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 324 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 383 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||||||| Sbjct: 384 gggcatccccccggaccagcagcgtctcatcttc 417 Score = 159 bits (80), Expect = 1e-35 Identities = 137/154 (88%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 492 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 551 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 552 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 611 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| ||||| || || ||||||||||||||| Sbjct: 612 gggcatccccccagaccagcagcgtctcatcttc 645 Score = 143 bits (72), Expect = 9e-31 Identities = 135/154 (87%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 |||||||||||||||||| |||||||||||||||||| || | || || ||||| ||||| Sbjct: 720 gctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 779 Query: 316 t---gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 ||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 780 cctcgaggtcgagtcctcggacacgatcgacaatgtgaaggccaagatccaggacaagga 839 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||||||| Sbjct: 840 gggcatccccccggaccagcagcgtctcatcttc 873 Score = 135 bits (68), Expect = 2e-28 Identities = 134/154 (87%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||| || |||||||||||||||||| || | || || ||||| ||||| Sbjct: 948 gctcaggctcaggggtggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 1007 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1008 gcttgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaagga 1067 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 ||| || |||||||| || ||||| ||||||||| Sbjct: 1068 gggtatccccccggaccagcagcgcctcatcttc 1101 Score = 115 bits (58), Expect = 2e-22 Identities = 130/152 (85%), Gaps = 4/152 (2%) Strand = Plus / Plus Query: 257 ctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac- 315 |||||||||||||| || |||||||||||||| ||| || | ||||| ||||| || || Sbjct: 1177 ctcaggctcaggggtgggatgcagatcttcgtgaagaccctgactggcaagaccattacc 1236 Query: 316 --tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggag 373 |||||| ||||| || ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 1237 cttgaggttgagtcgtccgacactattgacaacgtgaaggcgaagatccaggacaaggag 1296 Query: 374 ggcat-cccccggatcaacagcgtctcatctt 404 ||||| |||||||| || |||||||| ||||| Sbjct: 1297 ggcatccccccggaccagcagcgtctgatctt 1328 Score = 113 bits (57), Expect = 8e-22 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 100 gaggttgagtcctcggacaccattgacaatgtcaaggccaagatccaggacaaggagggc 159 Query: 377 at-cccccggatcaacagcgtctcatctt 404 || |||||||| || |||||||||||||| Sbjct: 160 atccccccggaccagcagcgtctcatctt 188 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 656 agctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacc 715 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 716 ttgtgctcaggctca 730 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||||||| ||||||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 884 agctggaggacggccgcacccttgccgactacaacatccagaaggagtccaccctccacc 943 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 944 ttgtgctcaggctca 958 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 200 agcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacc 259 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 260 ttgtgctcaggctca 274 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 428 agcttgaggatggccgcaccctggccgactacaacatccagaaggagtctaccctccacc 487 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 488 ttgtgctcaggctca 502 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||| |||||||||||||||||||| ||||||| ||||| |||| Sbjct: 1112 agctggaggatggccgcaccttggctgactacaacatccagaaggagtccacccttcacc 1171 Query: 240 tcgtgctcaggctca 254 | || |||||||||| Sbjct: 1172 tggttctcaggctca 1186 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 167 bits (84), Expect = 6e-38 Identities = 138/154 (89%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 28019141 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 28019200 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 28019201 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 28019260 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||||||| Sbjct: 28019261 gggcatccccccggaccagcagcgtctcatcttc 28019294 Score = 159 bits (80), Expect = 1e-35 Identities = 137/154 (88%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 28019369 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 28019428 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 28019429 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 28019488 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| ||||| || || ||||||||||||||| Sbjct: 28019489 gggcatccccccagaccagcagcgtctcatcttc 28019522 Score = 151 bits (76), Expect = 4e-33 Identities = 136/154 (88%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 |||||||||||||||||| |||||||||||||||||| || | || || ||||| ||||| Sbjct: 28019597 gctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 28019656 Query: 316 t---gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 ||||| |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 28019657 cctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaagga 28019716 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||||||| Sbjct: 28019717 gggcatccccccggaccagcagcgtctcatcttc 28019750 Score = 151 bits (76), Expect = 4e-33 Identities = 133/150 (88%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 260 aggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac---t 316 |||||||||||||| |||||||||||||||||| || | ||||| ||||| ||||| | Sbjct: 28019829 aggctcaggggaggtatgcagatcttcgtcaagaccctgactggcaagaccatcacactt 28019888 Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||| Sbjct: 28019889 gaggtcgagtcctcggacacgatcgacaatgtgaaggccaagatccaggacaaggagggc 28019948 Query: 377 at-cccccggatcaacagcgtctcatcttc 405 || |||||||| || ||||||||||||||| Sbjct: 28019949 atccccccggaccagcagcgtctcatcttc 28019978 Score = 135 bits (68), Expect = 2e-28 Identities = 134/154 (87%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||| || |||||||||||||||||| || | || || ||||| ||||| Sbjct: 28020053 gctcaggctcaggggtggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 28020112 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 28020113 gcttgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaagga 28020172 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 ||| || |||||||| || ||||| ||||||||| Sbjct: 28020173 gggtatccccccggaccagcagcgcctcatcttc 28020206 Score = 115 bits (58), Expect = 2e-22 Identities = 130/152 (85%), Gaps = 4/152 (2%) Strand = Plus / Plus Query: 257 ctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac- 315 |||||||||||||| || |||||||||||||| ||| || | ||||| ||||| || || Sbjct: 28020282 ctcaggctcaggggtgggatgcagatcttcgtgaagaccctgactggcaagaccattacc 28020341 Query: 316 --tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggag 373 |||||| ||||| || ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 28020342 cttgaggttgagtcgtccgacactattgacaacgtgaaggcgaagatccaggacaaggag 28020401 Query: 374 ggcat-cccccggatcaacagcgtctcatctt 404 ||||| |||||||| || |||||||| ||||| Sbjct: 28020402 ggcatccccccggaccagcagcgtctgatctt 28020433 Score = 113 bits (57), Expect = 8e-22 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 28018977 gaggttgagtcctcggacaccattgacaatgtcaaggccaagatccaggacaaggagggc 28019036 Query: 377 at-cccccggatcaacagcgtctcatctt 404 || |||||||| || |||||||||||||| Sbjct: 28019037 atccccccggaccagcagcgtctcatctt 28019065 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 28019533 agctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacc 28019592 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 28019593 ttgtgctcaggctca 28019607 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||||||| ||||||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 28019989 agctggaggacggccgcacccttgccgactacaacatccagaaggagtccaccctccacc 28020048 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 28020049 ttgtgctcaggctca 28020063 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/146 (84%), Gaps = 4/146 (2%) Strand = Plus / Minus Query: 263 ctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcact---gag 319 ||||||||||||||||||||||| || ||| |||| || || ||||| |||||| | | Sbjct: 27575458 ctcaggggaggcatgcagatctttgtgaagaccttgacaggaaagaccatcactcttgcg 27575399 Query: 320 gtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggca-t 378 || ||||||||||||| || ||||| |||||||| ||||| |||||||||||||| | | Sbjct: 27575398 gtcgagtcctcggacaagatcgacaatgtgaaggcgaagattcaggacaaggagggaatt 27575339 Query: 379 cccccggatcaacagcgtctcatctt 404 |||||||| || ||||| |||||||| Sbjct: 27575338 cccccggaccagcagcgcctcatctt 27575313 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 28019077 agcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacc 28019136 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 28019137 ttgtgctcaggctca 28019151 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 28019305 agcttgaggatggccgcaccctggccgactacaacatccagaaggagtctaccctccacc 28019364 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 28019365 ttgtgctcaggctca 28019379 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||||||| ||||||| || ||||||||||||||| |||| || |||||||||| Sbjct: 28019761 agctggaggacggccgcacccttgccgactacaacatccagaaggaatccaccctccacc 28019820 Query: 240 tcgtgctcaggctca 254 | ||||| ||||||| Sbjct: 28019821 ttgtgcttaggctca 28019835 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||| |||||||||||||||||||| ||||||| ||||| |||| Sbjct: 28020217 agctggaggatggccgcaccttggctgactacaacatccagaaggagtccacccttcacc 28020276 Query: 240 tcgtgctcaggctca 254 | || |||||||||| Sbjct: 28020277 tggttctcaggctca 28020291 >emb|X76064.1|OSPOLUBI O.sativa rub1 mRNA for polyubiquitin Length = 1673 Score = 167 bits (84), Expect = 6e-38 Identities = 138/154 (89%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 254 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 313 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 314 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 373 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| |||||||| || ||||||||||||||| Sbjct: 374 gggcatccccccggaccagcagcgtctcatcttc 407 Score = 159 bits (80), Expect = 1e-35 Identities = 137/154 (88%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 482 gctcaggctcaggggaggcatgcagatcttcgtcaagaccttgactggcaagaccatcac 541 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| ||||| || |||||||||||||| || ||||||||||| ||||||||||| Sbjct: 542 ccttgaggtcgagtcgtctgacaccattgacaatgtcaaggccaagatccaggacaagga 601 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 |||||| ||||| || || ||||||||||||||| Sbjct: 602 gggcatccccccagaccagcagcgtctcatcttc 635 Score = 149 bits (75), Expect = 1e-32 Identities = 135/153 (88%), Gaps = 4/153 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 |||||||||||||||||| |||||||||||||||||| || | || || ||||| ||||| Sbjct: 710 gctcaggctcaggggaggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 769 Query: 316 t---gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 ||||| |||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 770 cctcgaggtcgagtcctcggacacgatcgacaacgtgaaggccaagatccaggacaagga 829 Query: 373 gggcat-cccccggatcaacagcgtctcatctt 404 |||||| |||||||| || |||||||||||||| Sbjct: 830 gggcatccccccggaccagcagcgtctcatctt 862 Score = 135 bits (68), Expect = 2e-28 Identities = 134/154 (87%), Gaps = 4/154 (2%) Strand = Plus / Plus Query: 256 gctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac 315 ||||||||||||||| || |||||||||||||||||| || | || || ||||| ||||| Sbjct: 938 gctcaggctcaggggtggtatgcagatcttcgtcaagaccctgaccggcaagaccatcac 997 Query: 316 ---tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaagga 372 |||||| |||||||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 998 gcttgaggtcgagtcctcggacacgatcgacaatgtgaaggccaagatccaggacaagga 1057 Query: 373 gggcat-cccccggatcaacagcgtctcatcttc 405 ||| || |||||||| || ||||||||||||||| Sbjct: 1058 gggtatccccccggaccagcagcgtctcatcttc 1091 Score = 115 bits (58), Expect = 2e-22 Identities = 83/90 (92%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 317 gaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggagggc 376 ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 90 gaggttgagtcctcggacaccattgacaatgtcaaggccaagatccaggacaaggagggc 149 Query: 377 at-cccccggatcaacagcgtctcatcttc 405 || |||||||| || ||||||||||||||| Sbjct: 150 atccccccggaccagcagcgtctcatcttc 179 Score = 115 bits (58), Expect = 2e-22 Identities = 130/152 (85%), Gaps = 4/152 (2%) Strand = Plus / Plus Query: 257 ctcaggctcaggggaggcatgcagatcttcgtcaaggccttcactgggaagacaatcac- 315 |||||||||||||| || |||||||||||||| ||| || | ||||| ||||| || || Sbjct: 1167 ctcaggctcaggggtgggatgcagatcttcgtgaagaccctgactggcaagaccattacc 1226 Query: 316 --tgaggtggagtcctcggacaccattgacaacgtgaaggccaagatgcaggacaaggag 373 |||||| ||||| || ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct: 1227 cttgaggttgagtcgtccgacactattgacaacgtgaaggcgaagatccaggacaaggag 1286 Query: 374 ggcat-cccccggatcaacagcgtctcatctt 404 ||||| |||||||| || |||||||| ||||| Sbjct: 1287 ggcatccccccggaccagcagcgtctgatctt 1318 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 418 agcttgaggatggccgcaccctggctgactacaacatccagaaggagtccaccctccacc 477 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 478 ttgtgctcaggctca 492 Score = 101 bits (51), Expect = 3e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 646 agctggaggatggccgcacccttgctgactacaacatccagaaggagtccaccctccacc 705 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 706 ttgtgctcaggctca 720 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||| ||||| ||| |||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 190 agcttgaggatggccgcaccctggccgactacaacatccagaaggagtccaccctccacc 249 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 250 ttgtgctcaggctca 264 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 874 agctggaggatggccgcacccttgccgactacaacatccagaaggagtccaccctccacc 933 Query: 240 tcgtgctcaggctca 254 | ||||||||||||| Sbjct: 934 ttgtgctcaggctca 948 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 180 agctggaggacggctgcaccctggctgactacaacatccaggaggagtcgaccctccacc 239 |||||||||| ||| ||||| |||||||||||||||||||| ||||||| ||||| |||| Sbjct: 1102 agctggaggatggccgcaccttggctgactacaacatccagaaggagtccacccttcacc 1161 Query: 240 tcgtgctcaggctca 254 | || |||||||||| Sbjct: 1162 tggttctcaggctca 1176