BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst007k02
         (686 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...   174   3e-40
gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome...   174   3e-40
ref|NM_001051111.1| Oryza sativa (japonica cultivar-group) Os01g...   159   2e-35
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   159   2e-35
dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D...   159   2e-35

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  174 bits (88), Expect = 3e-40
 Identities = 125/136 (91%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                            
Query: 201      ggcggcggcggcggc-aagaagccgataaaggtgttgtacatctccaaccccatgcgggt 259
                ||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 18815047 ggcggcggcggcggggaagaagccgatcaaggtggtgtacatctccaaccccatgcgggt 18814988

                                                                            
Query: 260      gacgaccagcgctgcgggcttccgcgcgcttgtgcaggagctcaccggccgcaacgccga 319
                || ||||||||| || || |||||||| || |||||||||||||||||||||||||||||
Sbjct: 18814987 gaggaccagcgccgccgggttccgcgccctcgtgcaggagctcaccggccgcaacgccga 18814928

                                
Query: 320      cccgtccaagtacagc 335
                ||| ||||||||||||
Sbjct: 18814927 cccttccaagtacagc 18814912



 Score =  141 bits (71), Expect = 4e-30
 Identities = 104/115 (90%)
 Strand = Plus / Minus

                                                                            
Query: 228      aaggtgttgtacatctccaaccccatgcgggtgacgaccagcgctgcgggcttccgcgcg 287
                |||||| |||||||| ||||||| ||||||||||| |||||||  | |||||||||||||
Sbjct: 24026564 aaggtggtgtacatcgccaacccgatgcgggtgaccaccagcgaggagggcttccgcgcg 24026505

                                                                       
Query: 288      cttgtgcaggagctcaccggccgcaacgccgacccgtccaagtacagcggcggcg 342
                || ||||||||||||||||||||  |||||||||||||||||||| |||||||||
Sbjct: 24026504 ctcgtgcaggagctcaccggccggcacgccgacccgtccaagtaccgcggcggcg 24026450



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 60/65 (92%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                            
Query: 487      tcgcgccgcagctgatcgacaacatgtactccgtct---tctcgccgccgacgttcctct 543
                |||||||| ||||||||||||||| |||||||||||   |||||||||||||||||||||
Sbjct: 24026248 tcgcgccggagctgatcgacaacaggtactccgtctgcttctcgccgccgacgttcctct 24026189

                     
Query: 544      acggc 548
                |||||
Sbjct: 24026188 acggc 24026184


>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07,
             complete sequence
          Length = 71145

 Score =  174 bits (88), Expect = 3e-40
 Identities = 125/136 (91%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                         
Query: 201   ggcggcggcggcggc-aagaagccgataaaggtgttgtacatctccaaccccatgcgggt 259
             ||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 37413 ggcggcggcggcggggaagaagccgatcaaggtggtgtacatctccaaccccatgcgggt 37354

                                                                         
Query: 260   gacgaccagcgctgcgggcttccgcgcgcttgtgcaggagctcaccggccgcaacgccga 319
             || ||||||||| || || |||||||| || |||||||||||||||||||||||||||||
Sbjct: 37353 gaggaccagcgccgccgggttccgcgccctcgtgcaggagctcaccggccgcaacgccga 37294

                             
Query: 320   cccgtccaagtacagc 335
             ||| ||||||||||||
Sbjct: 37293 cccttccaagtacagc 37278


>ref|NM_001051111.1| Oryza sativa (japonica cultivar-group) Os01g0808900 (Os01g0808900)
           mRNA, complete cds
          Length = 555

 Score =  159 bits (80), Expect = 2e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                       
Query: 216 aagaagccgataaaggtgttgtacatctccaaccccatgcgggtgacgaccagcgctgcg 275
           ||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 106 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 165

                                                                       
Query: 276 ggcttccgcgcgcttgtgcaggagctcaccggccgcaacgccgacccgtccaagtacagc 335
           || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 225


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  159 bits (80), Expect = 2e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                            
Query: 216      aagaagccgataaaggtgttgtacatctccaaccccatgcgggtgacgaccagcgctgcg 275
                ||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 34350260 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 34350319

                                                                            
Query: 276      ggcttccgcgcgcttgtgcaggagctcaccggccgcaacgccgacccgtccaagtacagc 335
                || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 34350320 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 34350379


>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score =  159 bits (80), Expect = 2e-35
 Identities = 110/120 (91%)
 Strand = Plus / Plus

                                                                         
Query: 216   aagaagccgataaaggtgttgtacatctccaaccccatgcgggtgacgaccagcgctgcg 275
             ||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 32604 aagaagccgatcaaggtggtgtacatctccaaccccatgcgggtcaagaccagcgccgcc 32663

                                                                         
Query: 276   ggcttccgcgcgcttgtgcaggagctcaccggccgcaacgccgacccgtccaagtacagc 335
             || |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 32664 gggttccgcgccctcgtgcaggagctcaccggccgcaacgccgacccttccaagtacagc 32723