BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007j22 (1511 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063769.1| Oryza sativa (japonica cultivar-group) Os06g... 531 e-147 emb|CT835373.1| Oryza sativa (indica cultivar-group) cDNA clone:... 418 e-113 ref|NM_001054625.1| Oryza sativa (japonica cultivar-group) Os02g... 418 e-113 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic D... 180 1e-41 >ref|NM_001063769.1| Oryza sativa (japonica cultivar-group) Os06g0233800 (Os06g0233800) mRNA, complete cds Length = 1116 Score = 531 bits (268), Expect = e-147 Identities = 334/356 (93%) Strand = Plus / Plus Query: 613 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 672 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 322 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 381 Query: 673 ttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccaggag 732 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 382 ttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcaggag 441 Query: 733 cacgagatcaacctcatttcctcctggaccaaccctgctgactctcatccgaggacatgg 792 || |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||| Sbjct: 442 caagagatcaacctcatctcctcctggaacaaccctgccgattctcatccgaggacatgg 501 Query: 793 gaggctcagttccagtctggtatccagaccatcgctctgatcgctgtcagagaaggcgtt 852 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 502 gaggcgcagttccagtctggtatccagaccatcgccctgatcgctgtcagagaaggcgtc 561 Query: 853 gtacagctcggctccatgaaaaaggtggcggaggacctgagctacgtggtgacgctgcgc 912 || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 gtgcagctcggctccatgaaaaaggtggcggaggacctgagctacgtggtggcgctgcgg 621 Query: 913 cgcaagttcagctacctggagagcatcccgggggtgctgctgccgcacccgtcgtc 968 || |||||| | |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 622 cggaagttcgggtacctggagagcatcccgggtgtgctgctgccacacccgtcgtc 677 Score = 305 bits (154), Expect = 3e-79 Identities = 228/252 (90%), Gaps = 3/252 (1%) Strand = Plus / Plus Query: 292 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 351 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 60 Query: 352 ctatgcaccagcg---acgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 408 || |||||||||| ||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 61 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 120 Query: 409 aggaactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagagga 468 | |||||||||||||| |||||||||||||| |||||||| || |||||||| |||||| Sbjct: 121 cgcaactaccctcccccaaaatgggatctccccggtggggcatacgacaggacaagagga 180 Query: 469 aacaggaggaactggatcctggcatgggaggatggattctgcaacttcgcagccacctct 528 |||||||||||||||||| |||| |||||||| || |||||||||||||| |||||||| Sbjct: 181 aacaggaggaactggatcttggcgtgggaggacgggttctgcaacttcgcggccacctcc 240 Query: 529 ggagcctgcggc 540 | ||||||||| Sbjct: 241 gccgcctgcggc 252 Score = 131 bits (66), Expect = 9e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 1101 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1160 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 866 Query: 1161 gccctcggtcgtgccggc 1178 |||||| ||||||||||| Sbjct: 867 gccctccgtcgtgccggc 884 >emb|CT835373.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI227K23, full insert sequence Length = 1562 Score = 418 bits (211), Expect = e-113 Identities = 325/363 (89%) Strand = Plus / Plus Query: 611 agggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaag 670 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 621 agggcctccagcctgagctcttcttcaagatgtcccatgacatctacaactatggggaag 680 Query: 671 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 730 ||||| | |||||||| || || ||||| ||||||||||||||| | ||||| || | | Sbjct: 681 ggttggttgggaaagttgcagctgaccatggccacaagtgggtgtcccaggaggccaatg 740 Query: 731 agcacgagatcaacctcatttcctcctggaccaaccctgctgactctcatccgaggacat 790 |||||||||||||||| || |||| |||| ||||||||| || |||||||| ||||||| Sbjct: 741 agcacgagatcaacctggttacctcatggaacaaccctgccgattctcatccaaggacat 800 Query: 791 gggaggctcagttccagtctggtatccagaccatcgctctgatcgctgtcagagaaggcg 850 |||| |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 801 gggaagctcagttccagtccggtatcaagaccattgctctgatcgccgtcagagaaggcg 860 Query: 851 ttgtacagctcggctccatgaaaaaggtggcggaggacctgagctacgtggtgacgctgc 910 |||||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 861 ttgtacagttaggctccatgaagaaggtggcggaggacctgagctacgtggtggcgctgc 920 Query: 911 gccgcaagttcagctacctggagagcatcccgggggtgctgctgccgcacccgtcgtccg 970 | || |||||| | |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 921 ggcggaagttcgggtacctggagagcatcccgggcgtgctgctgccgcacccgtcgtcgg 980 Query: 971 ccg 973 ||| Sbjct: 981 ccg 983 Score = 218 bits (110), Expect = 5e-53 Identities = 203/234 (86%) Strand = Plus / Plus Query: 289 gcaatggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcgg 348 ||||||||||||||||||| ||| |||| ||||| || || ||||||||||||||||| Sbjct: 314 gcaatggaggagcagctgaacccactggctgtgacacagctactgcagcacacgctgcgc 373 Query: 349 agcctatgcaccagcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 408 |||| |||||| | || | | |||||||| ||||||||||||||||| |||||||| Sbjct: 374 ggcctctgcacccaaggcgactcccagtgggtgtacgccgtcttctggcgaatcctccca 433 Query: 409 aggaactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagagga 468 || ||||||||||| || ||||||||||| | ||||| | ||||||||||| |||||| Sbjct: 434 agaaactaccctcctccaaaatgggatcttcagggtggtgtttatgacaggagtagagga 493 Query: 469 aacaggaggaactggatcctggcatgggaggatggattctgcaacttcgcagcc 522 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 494 aacaggaggaactggatcctggcatgggaggatggattctgcaactttgcagcc 547 >ref|NM_001054625.1| Oryza sativa (japonica cultivar-group) Os02g0742700 (Os02g0742700) mRNA, complete cds Length = 1011 Score = 418 bits (211), Expect = e-113 Identities = 325/363 (89%) Strand = Plus / Plus Query: 611 agggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaag 670 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 305 agggcctccagcctgagctcttcttcaagatgtcccatgacatctacaactatggggaag 364 Query: 671 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 730 ||||| | |||||||| || || ||||| ||||||||||||||| | ||||| || | | Sbjct: 365 ggttggttgggaaagttgcagctgaccatggccacaagtgggtgtcccaggaggccaatg 424 Query: 731 agcacgagatcaacctcatttcctcctggaccaaccctgctgactctcatccgaggacat 790 |||||||||||||||| || |||| |||| ||||||||| || |||||||| ||||||| Sbjct: 425 agcacgagatcaacctggttacctcatggaacaaccctgccgattctcatccaaggacat 484 Query: 791 gggaggctcagttccagtctggtatccagaccatcgctctgatcgctgtcagagaaggcg 850 |||| |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||| Sbjct: 485 gggaagctcagttccagtccggtatcaagaccattgctctgatcgccgtcagagaaggcg 544 Query: 851 ttgtacagctcggctccatgaaaaaggtggcggaggacctgagctacgtggtgacgctgc 910 |||||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 545 ttgtacagttaggctccatgaagaaggtggcggaggacctgagctacgtggtggcgctgc 604 Query: 911 gccgcaagttcagctacctggagagcatcccgggggtgctgctgccgcacccgtcgtccg 970 | || |||||| | |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 605 ggcggaagttcgggtacctggagagcatcccgggcgtgctgctgccgcacccgtcgtcgg 664 Query: 971 ccg 973 ||| Sbjct: 665 ccg 667 Score = 212 bits (107), Expect = 3e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 292 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 351 |||||||||||||||| ||| |||| ||||| || || ||||||||||||||||| || Sbjct: 1 atggaggagcagctgaacccactggctgtgacacagctactgcagcacacgctgcgcggc 60 Query: 352 ctatgcaccagcgacgccacgcagtgggtctacgccgtcttctggcgcatcctccccagg 411 || |||||| | || | | |||||||| ||||||||||||||||| |||||||| || Sbjct: 61 ctctgcacccaaggcgactcccagtgggtgtacgccgtcttctggcgaatcctcccaaga 120 Query: 412 aactaccctccccccaaatgggatctcccaggtggggcttatgacaggaccagaggaaac 471 ||||||||||| || ||||||||||| | ||||| | ||||||||||| ||||||||| Sbjct: 121 aactaccctcctccaaaatgggatcttcagggtggtgtttatgacaggagtagaggaaac 180 Query: 472 aggaggaactggatcctggcatgggaggatggattctgcaacttcgcagcc 522 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 aggaggaactggatcctggcatgggaggatggattctgcaactttgcagcc 231 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 180 bits (91), Expect = 1e-41 Identities = 126/137 (91%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 292 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 351 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6966618 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 6966559 Query: 352 ctatgcacca---gcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 408 || ||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 6966558 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 6966499 Query: 409 aggaactaccctccccc 425 | |||||||||||||| Sbjct: 6966498 cgcaactaccctccccc 6966482 Score = 151 bits (76), Expect = 1e-32 Identities = 94/100 (94%) Strand = Plus / Minus Query: 671 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 730 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 6965945 ggttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcagg 6965886 Query: 731 agcacgagatcaacctcatttcctcctggaccaaccctgc 770 |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 6965885 agcaagagatcaacctcatctcctcctggaacaaccctgc 6965846 Score = 131 bits (66), Expect = 9e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 1101 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1160 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6965024 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 6964965 Query: 1161 gccctcggtcgtgccggc 1178 |||||| ||||||||||| Sbjct: 6964964 gccctccgtcgtgccggc 6964947 Score = 131 bits (66), Expect = 9e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 875 aggtggcggaggacctgagctacgtggtgacgctgcgccgcaagttcagctacctggaga 934 ||||||||||||||||||||||||||||| ||||||| || |||||| | |||||||||| Sbjct: 6965247 aggtggcggaggacctgagctacgtggtggcgctgcggcggaagttcgggtacctggaga 6965188 Query: 935 gcatcccgggggtgctgctgccgcacccgtcgtc 968 |||||||||| ||||||||||| ||||||||||| Sbjct: 6965187 gcatcccgggtgtgctgctgccacacccgtcgtc 6965154 Score = 101 bits (51), Expect = 8e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 817 cagaccatcgctctgatcgctgtcagagaaggcgttgtacagctcggctccatgaaaaag 876 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 6965491 cagaccatcgccctgatcgctgtcagagaaggcgtcgtgcagctcggctccatgaaaaag 6965432 Query: 877 gtg 879 ||| Sbjct: 6965431 gtg 6965429 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 613 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 672 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 6966077 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 6966018 Query: 673 t 673 | Sbjct: 6966017 t 6966017 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 424 cccaaatgggatctcccaggtggggcttatgacaggaccagaggaaacaggaggaactgg 483 |||| |||||||||||| |||||||| || |||||||| ||||||||||||||||||||| Sbjct: 6966366 cccagatgggatctccccggtggggcatacgacaggacaagaggaaacaggaggaactgg 6966307 >dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 180 bits (91), Expect = 1e-41 Identities = 126/137 (91%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 292 atggaggagcagctgagcccggtggccgtgacgcacctgctgcagcacacgctgcggagc 351 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26045 atggatgagcagctgagcccggtggccgtgacgcacttgctgcagcacacgctgcggagc 25986 Query: 352 ctatgcacca---gcgacgccacgcagtgggtctacgccgtcttctggcgcatcctcccc 408 || ||||||| |||||| | | |||||||||||||||||||||||||||||||||||| Sbjct: 25985 ctctgcaccagcggcgacgactcccagtgggtctacgccgtcttctggcgcatcctcccc 25926 Query: 409 aggaactaccctccccc 425 | |||||||||||||| Sbjct: 25925 cgcaactaccctccccc 25909 Score = 151 bits (76), Expect = 1e-32 Identities = 94/100 (94%) Strand = Plus / Minus Query: 671 ggttgatagggaaagtggcggcagaccacagccacaagtgggtgttcaaggagccccagg 730 ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 25372 ggttgatagggaaggtggcggcggaccacagccacaagtgggtgttcaaggagccgcagg 25313 Query: 731 agcacgagatcaacctcatttcctcctggaccaaccctgc 770 |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 25312 agcaagagatcaacctcatctcctcctggaacaaccctgc 25273 Score = 131 bits (66), Expect = 9e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 1101 gccggcgtccatgcacataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 1160 |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24451 gccgccgtccatgcagataatgccgtcgatgagcagcctcgaggcgctgctctcgaagct 24392 Query: 1161 gccctcggtcgtgccggc 1178 |||||| ||||||||||| Sbjct: 24391 gccctccgtcgtgccggc 24374 Score = 131 bits (66), Expect = 9e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 875 aggtggcggaggacctgagctacgtggtgacgctgcgccgcaagttcagctacctggaga 934 ||||||||||||||||||||||||||||| ||||||| || |||||| | |||||||||| Sbjct: 24674 aggtggcggaggacctgagctacgtggtggcgctgcggcggaagttcgggtacctggaga 24615 Query: 935 gcatcccgggggtgctgctgccgcacccgtcgtc 968 |||||||||| ||||||||||| ||||||||||| Sbjct: 24614 gcatcccgggtgtgctgctgccacacccgtcgtc 24581 Score = 101 bits (51), Expect = 8e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 817 cagaccatcgctctgatcgctgtcagagaaggcgttgtacagctcggctccatgaaaaag 876 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 24918 cagaccatcgccctgatcgctgtcagagaaggcgtcgtgcagctcggctccatgaaaaag 24859 Query: 877 gtg 879 ||| Sbjct: 24858 gtg 24856 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 613 ggcctgcagcctgagctgttcttcaagatgtcccatgacatctacaactatggtgaaggg 672 ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 25504 ggcctgcagcctgagctcttcttcaagatgtcccatgacatctacaactacggcgaaggg 25445 Query: 673 t 673 | Sbjct: 25444 t 25444 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 424 cccaaatgggatctcccaggtggggcttatgacaggaccagaggaaacaggaggaactgg 483 |||| |||||||||||| |||||||| || |||||||| ||||||||||||||||||||| Sbjct: 25793 cccagatgggatctccccggtggggcatacgacaggacaagaggaaacaggaggaactgg 25734