BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007j04 (1064 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CR855162.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 287 5e-74 ref|NM_001060363.1| Oryza sativa (japonica cultivar-group) Os04g... 287 5e-74 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 287 5e-74 emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4,... 287 5e-74 dbj|AK120522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 5e-74 >emb|CR855162.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0152L12, complete sequence Length = 91167 Score = 287 bits (145), Expect = 5e-74 Identities = 163/169 (96%) Strand = Plus / Plus Query: 52 ccatggcgccgccgccggggatcctcgaggtgcggtgcgcggggtgcgccgagactctgg 111 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| Sbjct: 17868 ccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctgg 17927 Query: 112 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatgccccaggcgctcc 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 17928 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcc 17987 Query: 172 cgccggagctcatgccgcctcgccctcgccgcgcgctcccgctccccgg 220 ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 17988 cgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgg 18036 Score = 129 bits (65), Expect = 3e-26 Identities = 224/277 (80%) Strand = Plus / Plus Query: 530 caagctttcttttagagaggagcccttcagttcattcagagttgacacaaggacacaaat 589 ||||| |||||||||||||||| | ||||||||||||||||||||| | ||||||||||| Sbjct: 19475 caagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaat 19534 Query: 590 tcctgtagtagggaggctacaaaatgagcctgccaatccctcagagcatagagaggagtc 649 ||||| ||||||||| ||||||| ||| || ||||| |||| || |||||||||| Sbjct: 19535 tcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtc 19594 Query: 650 acataccgagccactcaatgtgactattgccaagcctggcaagaaggaatctagatttgc 709 || || || |||| || | |||||| ||||||||||||||||| || ||| || ||| Sbjct: 19595 acgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgc 19654 Query: 710 agttggtccaaaatcttgtcaaccaggaaaggtgcaggcagagcatcctaatcaggccgt 769 ||||||||||||| || | | |||||| |||||| ||||||| || | ||||| | Sbjct: 19655 ttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccat 19714 Query: 770 ccatgcgtcacaggcacaaggaatgctttcaaactct 806 |||||| ||| ||| || ||||||| |||||||||| Sbjct: 19715 ccatgcatcaagggctcagggaatgccttcaaactct 19751 Score = 121 bits (61), Expect = 6e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||| Sbjct: 9377 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggactgacggagttc 9318 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccgcc 190 |||||||||||||| |||||| ||| |||| || ||||||||||||||||| Sbjct: 9317 atctgccccgactgcgccatgccgcagtcgctgcccccggagctcatgccgcc 9265 Score = 115 bits (58), Expect = 4e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 71 gatcctcgaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgac 130 |||||| |||||| ||||||||||||||| ||||| ||||||||||||| || ||||| Sbjct: 3763 gatcctggaggtggggtgcgcggggtgcggggagacgctggaggtggagcgggggctgac 3704 Query: 131 ggagttcgcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccg 188 |||||||| |||||| ||||||| || ||| ||| ||||||||||||| ||||||||| Sbjct: 3703 ggagttcgtctgcccggactgcgccacgccgcagtcgctcccgccggatctcatgccg 3646 Score = 115 bits (58), Expect = 4e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| ||||| || |||||| Sbjct: 15713 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggcctcaccgagttc 15654 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgcc 187 |||||||| |||||||| | | ||||||||||||||| ||||||||||| Sbjct: 15653 gcctgcccggactgcgggacccaccaggcgctcccgcccgagctcatgcc 15604 >ref|NM_001060363.1| Oryza sativa (japonica cultivar-group) Os04g0610200 (Os04g0610200) mRNA, complete cds Length = 3300 Score = 287 bits (145), Expect = 5e-74 Identities = 163/169 (96%) Strand = Plus / Plus Query: 52 ccatggcgccgccgccggggatcctcgaggtgcggtgcgcggggtgcgccgagactctgg 111 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| Sbjct: 59 ccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctgg 118 Query: 112 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatgccccaggcgctcc 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcc 178 Query: 172 cgccggagctcatgccgcctcgccctcgccgcgcgctcccgctccccgg 220 ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 179 cgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgg 227 Score = 129 bits (65), Expect = 3e-26 Identities = 224/277 (80%) Strand = Plus / Plus Query: 530 caagctttcttttagagaggagcccttcagttcattcagagttgacacaaggacacaaat 589 ||||| |||||||||||||||| | ||||||||||||||||||||| | ||||||||||| Sbjct: 549 caagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaat 608 Query: 590 tcctgtagtagggaggctacaaaatgagcctgccaatccctcagagcatagagaggagtc 649 ||||| ||||||||| ||||||| ||| || ||||| |||| || |||||||||| Sbjct: 609 tcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtc 668 Query: 650 acataccgagccactcaatgtgactattgccaagcctggcaagaaggaatctagatttgc 709 || || || |||| || | |||||| ||||||||||||||||| || ||| || ||| Sbjct: 669 acgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgc 728 Query: 710 agttggtccaaaatcttgtcaaccaggaaaggtgcaggcagagcatcctaatcaggccgt 769 ||||||||||||| || | | |||||| |||||| ||||||| || | ||||| | Sbjct: 729 ttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccat 788 Query: 770 ccatgcgtcacaggcacaaggaatgctttcaaactct 806 |||||| ||| ||| || ||||||| |||||||||| Sbjct: 789 ccatgcatcaagggctcagggaatgccttcaaactct 825 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 287 bits (145), Expect = 5e-74 Identities = 163/169 (96%) Strand = Plus / Plus Query: 52 ccatggcgccgccgccggggatcctcgaggtgcggtgcgcggggtgcgccgagactctgg 111 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| Sbjct: 30961598 ccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctgg 30961657 Query: 112 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatgccccaggcgctcc 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30961658 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcc 30961717 Query: 172 cgccggagctcatgccgcctcgccctcgccgcgcgctcccgctccccgg 220 ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 30961718 cgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgg 30961766 Score = 129 bits (65), Expect = 3e-26 Identities = 224/277 (80%) Strand = Plus / Plus Query: 530 caagctttcttttagagaggagcccttcagttcattcagagttgacacaaggacacaaat 589 ||||| |||||||||||||||| | ||||||||||||||||||||| | ||||||||||| Sbjct: 30963205 caagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaat 30963264 Query: 590 tcctgtagtagggaggctacaaaatgagcctgccaatccctcagagcatagagaggagtc 649 ||||| ||||||||| ||||||| ||| || ||||| |||| || |||||||||| Sbjct: 30963265 tcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtc 30963324 Query: 650 acataccgagccactcaatgtgactattgccaagcctggcaagaaggaatctagatttgc 709 || || || |||| || | |||||| ||||||||||||||||| || ||| || ||| Sbjct: 30963325 acgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgc 30963384 Query: 710 agttggtccaaaatcttgtcaaccaggaaaggtgcaggcagagcatcctaatcaggccgt 769 ||||||||||||| || | | |||||| |||||| ||||||| || | ||||| | Sbjct: 30963385 ttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccat 30963444 Query: 770 ccatgcgtcacaggcacaaggaatgctttcaaactct 806 |||||| ||| ||| || ||||||| |||||||||| Sbjct: 30963445 ccatgcatcaagggctcagggaatgccttcaaactct 30963481 Score = 121 bits (61), Expect = 6e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||| Sbjct: 30953114 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggactgacggagttc 30953055 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccgcc 190 |||||||||||||| |||||| ||| |||| || ||||||||||||||||| Sbjct: 30953054 atctgccccgactgcgccatgccgcagtcgctgcccccggagctcatgccgcc 30953002 Score = 115 bits (58), Expect = 4e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 71 gatcctcgaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgac 130 |||||| |||||| ||||||||||||||| ||||| ||||||||||||| || ||||| Sbjct: 30947500 gatcctggaggtggggtgcgcggggtgcggggagacgctggaggtggagcgggggctgac 30947441 Query: 131 ggagttcgcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccg 188 |||||||| |||||| ||||||| || ||| ||| ||||||||||||| ||||||||| Sbjct: 30947440 ggagttcgtctgcccggactgcgccacgccgcagtcgctcccgccggatctcatgccg 30947383 Score = 115 bits (58), Expect = 4e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| ||||| || |||||| Sbjct: 30959447 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggcctcaccgagttc 30959388 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgcc 187 |||||||| |||||||| | | ||||||||||||||| ||||||||||| Sbjct: 30959387 gcctgcccggactgcgggacccaccaggcgctcccgcccgagctcatgcc 30959338 >emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 287 bits (145), Expect = 5e-74 Identities = 163/169 (96%) Strand = Plus / Plus Query: 52 ccatggcgccgccgccggggatcctcgaggtgcggtgcgcggggtgcgccgagactctgg 111 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| Sbjct: 58970 ccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctgg 59029 Query: 112 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatgccccaggcgctcc 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 59030 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcc 59089 Query: 172 cgccggagctcatgccgcctcgccctcgccgcgcgctcccgctccccgg 220 ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 59090 cgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgg 59138 Score = 129 bits (65), Expect = 3e-26 Identities = 224/277 (80%) Strand = Plus / Plus Query: 530 caagctttcttttagagaggagcccttcagttcattcagagttgacacaaggacacaaat 589 ||||| |||||||||||||||| | ||||||||||||||||||||| | ||||||||||| Sbjct: 60577 caagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaat 60636 Query: 590 tcctgtagtagggaggctacaaaatgagcctgccaatccctcagagcatagagaggagtc 649 ||||| ||||||||| ||||||| ||| || ||||| |||| || |||||||||| Sbjct: 60637 tcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtc 60696 Query: 650 acataccgagccactcaatgtgactattgccaagcctggcaagaaggaatctagatttgc 709 || || || |||| || | |||||| ||||||||||||||||| || ||| || ||| Sbjct: 60697 acgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgc 60756 Query: 710 agttggtccaaaatcttgtcaaccaggaaaggtgcaggcagagcatcctaatcaggccgt 769 ||||||||||||| || | | |||||| |||||| ||||||| || | ||||| | Sbjct: 60757 ttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccat 60816 Query: 770 ccatgcgtcacaggcacaaggaatgctttcaaactct 806 |||||| ||| ||| || ||||||| |||||||||| Sbjct: 60817 ccatgcatcaagggctcagggaatgccttcaaactct 60853 Score = 121 bits (61), Expect = 6e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||| Sbjct: 50486 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggactgacggagttc 50427 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccgcc 190 |||||||||||||| |||||| ||| |||| || ||||||||||||||||| Sbjct: 50426 atctgccccgactgcgccatgccgcagtcgctgcccccggagctcatgccgcc 50374 Score = 115 bits (58), Expect = 4e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 71 gatcctcgaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgac 130 |||||| |||||| ||||||||||||||| ||||| ||||||||||||| || ||||| Sbjct: 44872 gatcctggaggtggggtgcgcggggtgcggggagacgctggaggtggagcgggggctgac 44813 Query: 131 ggagttcgcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgccg 188 |||||||| |||||| ||||||| || ||| ||| ||||||||||||| ||||||||| Sbjct: 44812 ggagttcgtctgcccggactgcgccacgccgcagtcgctcccgccggatctcatgccg 44755 Score = 115 bits (58), Expect = 4e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 78 gaggtgcggtgcgcggggtgcgccgagactctggaggtggagcacggcctgacggagttc 137 |||||||||||||||||||||| ||||| ||||||||||||| ||||| || |||||| Sbjct: 56819 gaggtgcggtgcgcggggtgcggggagacgctggaggtggagccgggcctcaccgagttc 56760 Query: 138 gcctgccccgactgcggcatgccccaggcgctcccgccggagctcatgcc 187 |||||||| |||||||| | | ||||||||||||||| ||||||||||| Sbjct: 56759 gcctgcccggactgcgggacccaccaggcgctcccgcccgagctcatgcc 56710 >dbj|AK120522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125C13, full insert sequence Length = 3303 Score = 287 bits (145), Expect = 5e-74 Identities = 163/169 (96%) Strand = Plus / Plus Query: 52 ccatggcgccgccgccggggatcctcgaggtgcggtgcgcggggtgcgccgagactctgg 111 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| Sbjct: 60 ccatggcgccgccgccggggatcctcgaggtgcggtgcgccgggtgcggcgagaccctgg 119 Query: 112 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatgccccaggcgctcc 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 120 aggtggagcacggcctgacggagttcgcctgccccgactgcggcatggcccaggcgctcc 179 Query: 172 cgccggagctcatgccgcctcgccctcgccgcgcgctcccgctccccgg 220 ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 180 cgccggagctcatgccgccgcgcccccgccgcgcgctcccgctccccgg 228 Score = 129 bits (65), Expect = 3e-26 Identities = 224/277 (80%) Strand = Plus / Plus Query: 530 caagctttcttttagagaggagcccttcagttcattcagagttgacacaaggacacaaat 589 ||||| |||||||||||||||| | ||||||||||||||||||||| | ||||||||||| Sbjct: 550 caagcattcttttagagaggagtcattcagttcattcagagttgactctaggacacaaat 609 Query: 590 tcctgtagtagggaggctacaaaatgagcctgccaatccctcagagcatagagaggagtc 649 ||||| ||||||||| ||||||| ||| || ||||| |||| || |||||||||| Sbjct: 610 tcctgatgtagggaggttacaaaacgagtgtgttaatccttcagctgatcgagaggagtc 669 Query: 650 acataccgagccactcaatgtgactattgccaagcctggcaagaaggaatctagatttgc 709 || || || |||| || | |||||| ||||||||||||||||| || ||| || ||| Sbjct: 670 acgcacagaaccacctaacgggactatgaccaagcctggcaagaagaaaactacatctgc 729 Query: 710 agttggtccaaaatcttgtcaaccaggaaaggtgcaggcagagcatcctaatcaggccgt 769 ||||||||||||| || | | |||||| |||||| ||||||| || | ||||| | Sbjct: 730 ttctggtccaaaatctcatccagctggaaagttgcaggaagagcatattagtaaggccat 789 Query: 770 ccatgcgtcacaggcacaaggaatgctttcaaactct 806 |||||| ||| ||| || ||||||| |||||||||| Sbjct: 790 ccatgcatcaagggctcagggaatgccttcaaactct 826