BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007h01 (820 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055374.1| Oryza sativa (japonica cultivar-group) Os03g... 204 4e-49 dbj|AK064718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 4e-49 emb|CT831718.1| Oryza sativa (indica cultivar-group) cDNA clone:... 196 1e-46 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35 gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 159 2e-35 >ref|NM_001055374.1| Oryza sativa (japonica cultivar-group) Os03g0128300 (Os03g0128300) mRNA, complete cds Length = 893 Score = 204 bits (103), Expect = 4e-49 Identities = 115/119 (96%) Strand = Plus / Plus Query: 442 cggcctcctcctcgccgcgttggaacggacgtggaggaagacggtggcgggggcgtcgaa 501 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 430 cggcctcctcctcgccgcgttggagcggacatggaggaagacggtggcgggggcgtcgaa 489 Query: 502 gatgttcgtcgagaggcaccggaccaaccacgtgctgctcatcagcgacatggtctgag 560 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 490 gatgttcgtggagaggcaccgcaccaaccacgtgctgctcatcagcgacatggtctgag 548 Score = 145 bits (73), Expect = 3e-31 Identities = 141/163 (86%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 114 cggtgtcggtgcagcacgtggcgaaggcgtcctcggacgagctcctccgcaagttcgccg 173 ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 90 cggtgtccgtgcagcacgtggcgagggcgtcgtcggacgagctcctgcgcaagttcgccg 149 Query: 174 acccggacgc---tgcccaccacctgacgccgccccgccgcagcctcgcgctgcgacgca 230 |||||||||| ||| | || | |||||||| || ||||||||||||||||| || | Sbjct: 150 acccggacgcgcacgccaagcagatcacgccgccgcggcgcagcctcgcgctgcggcgga 209 Query: 231 agtgctcgtcccgccgggtggcgtcggggctctccgcgaggga 273 || | |||||| | |||||||||||||||||||||||||||| Sbjct: 210 agcggtcgtccaggagggtggcgtcggggctctccgcgaggga 252 Score = 129 bits (65), Expect = 2e-26 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 308 cccaagcggaggcggagcatcggcgggtcgaccgagtggaaggccgggctgcttctgccc 367 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 281 cccaagcggaggcggagcatcggcgggtccaccgagtggaaggccgggctgctgctgccg 340 Query: 368 acg---accacggcctccgcgcgcaagggcggcgccgtgacccacgcccgccgaggtggg 424 ||| |||||||||||||| |||||||| ||||| || |||| ||| ||| || ||| Sbjct: 341 acgaccaccacggcctccgcccgcaagggatccgccgcgagccactcccaccggggcggg 400 Query: 425 gccgcgcggctcgat 439 |||||||| |||||| Sbjct: 401 gccgcgcgcctcgat 415 >dbj|AK064718.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E07, full insert sequence Length = 893 Score = 204 bits (103), Expect = 4e-49 Identities = 115/119 (96%) Strand = Plus / Plus Query: 442 cggcctcctcctcgccgcgttggaacggacgtggaggaagacggtggcgggggcgtcgaa 501 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 430 cggcctcctcctcgccgcgttggagcggacatggaggaagacggtggcgggggcgtcgaa 489 Query: 502 gatgttcgtcgagaggcaccggaccaaccacgtgctgctcatcagcgacatggtctgag 560 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 490 gatgttcgtggagaggcaccgcaccaaccacgtgctgctcatcagcgacatggtctgag 548 Score = 145 bits (73), Expect = 3e-31 Identities = 141/163 (86%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 114 cggtgtcggtgcagcacgtggcgaaggcgtcctcggacgagctcctccgcaagttcgccg 173 ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 90 cggtgtccgtgcagcacgtggcgagggcgtcgtcggacgagctcctgcgcaagttcgccg 149 Query: 174 acccggacgc---tgcccaccacctgacgccgccccgccgcagcctcgcgctgcgacgca 230 |||||||||| ||| | || | |||||||| || ||||||||||||||||| || | Sbjct: 150 acccggacgcgcacgccaagcagatcacgccgccgcggcgcagcctcgcgctgcggcgga 209 Query: 231 agtgctcgtcccgccgggtggcgtcggggctctccgcgaggga 273 || | |||||| | |||||||||||||||||||||||||||| Sbjct: 210 agcggtcgtccaggagggtggcgtcggggctctccgcgaggga 252 Score = 129 bits (65), Expect = 2e-26 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 308 cccaagcggaggcggagcatcggcgggtcgaccgagtggaaggccgggctgcttctgccc 367 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 281 cccaagcggaggcggagcatcggcgggtccaccgagtggaaggccgggctgctgctgccg 340 Query: 368 acg---accacggcctccgcgcgcaagggcggcgccgtgacccacgcccgccgaggtggg 424 ||| |||||||||||||| |||||||| ||||| || |||| ||| ||| || ||| Sbjct: 341 acgaccaccacggcctccgcccgcaagggatccgccgcgagccactcccaccggggcggg 400 Query: 425 gccgcgcggctcgat 439 |||||||| |||||| Sbjct: 401 gccgcgcgcctcgat 415 >emb|CT831718.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN012B03, full insert sequence Length = 945 Score = 196 bits (99), Expect = 1e-46 Identities = 114/119 (95%) Strand = Plus / Plus Query: 442 cggcctcctcctcgccgcgttggaacggacgtggaggaagacggtggcgggggcgtcgaa 501 |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 482 cggcctcctcctcgccgcgttggagcggacatggaggaagacggtagcgggggcgtcgaa 541 Query: 502 gatgttcgtcgagaggcaccggaccaaccacgtgctgctcatcagcgacatggtctgag 560 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 542 gatgttcgtggagaggcaccgcaccaaccacgtgctgctcatcagcgacatggtctgag 600 Score = 145 bits (73), Expect = 3e-31 Identities = 141/163 (86%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 114 cggtgtcggtgcagcacgtggcgaaggcgtcctcggacgagctcctccgcaagttcgccg 173 ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 142 cggtgtccgtgcagcacgtggcgagggcgtcgtcggacgagctcctgcgcaagttcgccg 201 Query: 174 acccggacgc---tgcccaccacctgacgccgccccgccgcagcctcgcgctgcgacgca 230 |||||||||| ||| | || | |||||||| || ||||||||||||||||| || | Sbjct: 202 acccggacgcgcacgccaagcagatcacgccgccgcggcgcagcctcgcgctgcggcgga 261 Query: 231 agtgctcgtcccgccgggtggcgtcggggctctccgcgaggga 273 || | |||||| | |||||||||||||||||||||||||||| Sbjct: 262 agcggtcgtccaggagggtggcgtcggggctctccgcgaggga 304 Score = 137 bits (69), Expect = 8e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 308 cccaagcggaggcggagcatcggcgggtcgaccgagtggaaggccgggctgcttctgccc 367 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 333 cccaagcggaggcggagcatcggcgggtccaccgagtggaaggccgggctgctgctgccg 392 Query: 368 acg---accacggcctccgcgcgcaagggcggcgccgtgacccacgcccgccgaggtggg 424 ||| |||||||||||||| |||||||| ||||| || |||| ||||||| || ||| Sbjct: 393 acgaccaccacggcctccgcccgcaagggatccgccgcgagccactcccgccggggcggg 452 Query: 425 gccgcgcggctcgat 439 |||||||| |||||| Sbjct: 453 gccgcgcgcctcgat 467 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 159 bits (80), Expect = 2e-35 Identities = 86/88 (97%) Strand = Plus / Minus Query: 473 tggaggaagacggtggcgggggcgtcgaagatgttcgtcgagaggcaccggaccaaccac 532 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1588144 tggaggaagacggtggcgggggcgtcgaagatgttcgtggagaggcaccgcaccaaccac 1588085 Query: 533 gtgctgctcatcagcgacatggtctgag 560 |||||||||||||||||||||||||||| Sbjct: 1588084 gtgctgctcatcagcgacatggtctgag 1588057 Score = 145 bits (73), Expect = 3e-31 Identities = 141/163 (86%), Gaps = 3/163 (1%) Strand = Plus / Minus Query: 114 cggtgtcggtgcagcacgtggcgaaggcgtcctcggacgagctcctccgcaagttcgccg 173 ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 1588595 cggtgtccgtgcagcacgtggcgagggcgtcgtcggacgagctcctgcgcaagttcgccg 1588536 Query: 174 acccggacgc---tgcccaccacctgacgccgccccgccgcagcctcgcgctgcgacgca 230 |||||||||| ||| | || | |||||||| || ||||||||||||||||| || | Sbjct: 1588535 acccggacgcgcacgccaagcagatcacgccgccgcggcgcagcctcgcgctgcggcgga 1588476 Query: 231 agtgctcgtcccgccgggtggcgtcggggctctccgcgaggga 273 || | |||||| | |||||||||||||||||||||||||||| Sbjct: 1588475 agcggtcgtccaggagggtggcgtcggggctctccgcgaggga 1588433 Score = 129 bits (65), Expect = 2e-26 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Minus Query: 308 cccaagcggaggcggagcatcggcgggtcgaccgagtggaaggccgggctgcttctgccc 367 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1588404 cccaagcggaggcggagcatcggcgggtccaccgagtggaaggccgggctgctgctgccg 1588345 Query: 368 acg---accacggcctccgcgcgcaagggcggcgccgtgacccacgcccgccgaggtggg 424 ||| |||||||||||||| |||||||| ||||| || |||| ||| ||| || ||| Sbjct: 1588344 acgaccaccacggcctccgcccgcaagggatccgccgcgagccactcccaccggggcggg 1588285 Query: 425 gccgcgcggctcgat 439 |||||||| |||||| Sbjct: 1588284 gccgcgcgcctcgat 1588270 >gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 159 bits (80), Expect = 2e-35 Identities = 86/88 (97%) Strand = Plus / Minus Query: 473 tggaggaagacggtggcgggggcgtcgaagatgttcgtcgagaggcaccggaccaaccac 532 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 67707 tggaggaagacggtggcgggggcgtcgaagatgttcgtggagaggcaccgcaccaaccac 67648 Query: 533 gtgctgctcatcagcgacatggtctgag 560 |||||||||||||||||||||||||||| Sbjct: 67647 gtgctgctcatcagcgacatggtctgag 67620 Score = 145 bits (73), Expect = 3e-31 Identities = 141/163 (86%), Gaps = 3/163 (1%) Strand = Plus / Minus Query: 114 cggtgtcggtgcagcacgtggcgaaggcgtcctcggacgagctcctccgcaagttcgccg 173 ||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 68158 cggtgtccgtgcagcacgtggcgagggcgtcgtcggacgagctcctgcgcaagttcgccg 68099 Query: 174 acccggacgc---tgcccaccacctgacgccgccccgccgcagcctcgcgctgcgacgca 230 |||||||||| ||| | || | |||||||| || ||||||||||||||||| || | Sbjct: 68098 acccggacgcgcacgccaagcagatcacgccgccgcggcgcagcctcgcgctgcggcgga 68039 Query: 231 agtgctcgtcccgccgggtggcgtcggggctctccgcgaggga 273 || | |||||| | |||||||||||||||||||||||||||| Sbjct: 68038 agcggtcgtccaggagggtggcgtcggggctctccgcgaggga 67996 Score = 129 bits (65), Expect = 2e-26 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Minus Query: 308 cccaagcggaggcggagcatcggcgggtcgaccgagtggaaggccgggctgcttctgccc 367 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 67967 cccaagcggaggcggagcatcggcgggtccaccgagtggaaggccgggctgctgctgccg 67908 Query: 368 acg---accacggcctccgcgcgcaagggcggcgccgtgacccacgcccgccgaggtggg 424 ||| |||||||||||||| |||||||| ||||| || |||| ||| ||| || ||| Sbjct: 67907 acgaccaccacggcctccgcccgcaagggatccgccgcgagccactcccaccggggcggg 67848 Query: 425 gccgcgcggctcgat 439 |||||||| |||||| Sbjct: 67847 gccgcgcgcctcgat 67833