BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007g14 (829 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT832998.1| Oryza sativa (indica cultivar-group) cDNA clone:... 379 e-101 ref|NM_001060961.1| Oryza sativa (japonica cultivar-group) Os05g... 379 e-101 dbj|AK065182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 379 e-101 gb|AY643717.1| Oryza sativa (indica cultivar-group) transcriptio... 361 3e-96 gb|AY643716.1| Oryza sativa (indica cultivar-group) transcriptio... 353 7e-94 >emb|CT832998.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI002K16, full insert sequence Length = 838 Score = 379 bits (191), Expect = e-101 Identities = 299/335 (89%) Strand = Plus / Plus Query: 174 atggccaccttcgagctgtaccggaggtccagcattggcatgtgcctcactgagacgctg 233 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140 atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc 199 Query: 234 gacgagatggtctccagtggcactctcagccctgagctcgccattcaagtgcttgtccag 293 ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 200 gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgtccag 259 Query: 294 tttgataagtctatgaccgaggcgttagaaaaccaagtgaagagcaagtcttctattaag 353 ||||||||||||||||| || || || || |||||||| ||||||||| |||||| ||| Sbjct: 260 tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag 319 Query: 354 ggccatcttcacacctacaggttttgtgacaatgtctggacattcatcttgcaagatgcc 413 ||||| || ||||| |||||||| ||||||||||| ||||||||||||||| || || Sbjct: 320 ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca 379 Query: 414 actttcaagaacgaggagacgacagaagatgttggcaaggtgaagattgtggcctgcgat 473 | ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| Sbjct: 380 tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat 439 Query: 474 tccaaattactcagccaataacttgcttactgcga 508 |||||| |||||||||||||| ||| | ||||||| Sbjct: 440 tccaaactactcagccaataaattgataactgcga 474 Score = 77.8 bits (39), Expect = 6e-11 Identities = 72/82 (87%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 561 actgcaccaccacattgctgttttcataatcaatgtgtatctatacaatcttctgtgcta 620 |||| |||||||||||| | ||||||||||||||||| || |||||||| | ||||||| Sbjct: 536 actgtaccaccacattgtttgtttcataatcaatgtgtgtcaatacaatcgtatgtgcta 595 Query: 621 ccagag--tatcacagcagcaa 640 |||||| |||||||||||||| Sbjct: 596 ccagagtatatcacagcagcaa 617 >ref|NM_001060961.1| Oryza sativa (japonica cultivar-group) Os05g0107700 (Os05g0107700) mRNA, complete cds Length = 905 Score = 379 bits (191), Expect = e-101 Identities = 299/335 (89%) Strand = Plus / Plus Query: 174 atggccaccttcgagctgtaccggaggtccagcattggcatgtgcctcactgagacgctg 233 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 209 atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc 268 Query: 234 gacgagatggtctccagtggcactctcagccctgagctcgccattcaagtgcttgtccag 293 ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 269 gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgtccag 328 Query: 294 tttgataagtctatgaccgaggcgttagaaaaccaagtgaagagcaagtcttctattaag 353 ||||||||||||||||| || || || || |||||||| ||||||||| |||||| ||| Sbjct: 329 tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag 388 Query: 354 ggccatcttcacacctacaggttttgtgacaatgtctggacattcatcttgcaagatgcc 413 ||||| || ||||| |||||||| ||||||||||| ||||||||||||||| || || Sbjct: 389 ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca 448 Query: 414 actttcaagaacgaggagacgacagaagatgttggcaaggtgaagattgtggcctgcgat 473 | ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| Sbjct: 449 tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat 508 Query: 474 tccaaattactcagccaataacttgcttactgcga 508 |||||| |||||||||||||| ||| | ||||||| Sbjct: 509 tccaaactactcagccaataaattgataactgcga 543 Score = 77.8 bits (39), Expect = 6e-11 Identities = 72/82 (87%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 561 actgcaccaccacattgctgttttcataatcaatgtgtatctatacaatcttctgtgcta 620 |||| |||||||||||| | ||||||||||||||||| || |||||||| | ||||||| Sbjct: 605 actgtaccaccacattgtttgtttcataatcaatgtgtgtcaatacaatcgtatgtgcta 664 Query: 621 ccagag--tatcacagcagcaa 640 |||||| |||||||||||||| Sbjct: 665 ccagagtatatcacagcagcaa 686 >dbj|AK065182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D19, full insert sequence Length = 906 Score = 379 bits (191), Expect = e-101 Identities = 299/335 (89%) Strand = Plus / Plus Query: 174 atggccaccttcgagctgtaccggaggtccagcattggcatgtgcctcactgagacgctg 233 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 210 atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc 269 Query: 234 gacgagatggtctccagtggcactctcagccctgagctcgccattcaagtgcttgtccag 293 ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 270 gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgtccag 329 Query: 294 tttgataagtctatgaccgaggcgttagaaaaccaagtgaagagcaagtcttctattaag 353 ||||||||||||||||| || || || || |||||||| ||||||||| |||||| ||| Sbjct: 330 tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag 389 Query: 354 ggccatcttcacacctacaggttttgtgacaatgtctggacattcatcttgcaagatgcc 413 ||||| || ||||| |||||||| ||||||||||| ||||||||||||||| || || Sbjct: 390 ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca 449 Query: 414 actttcaagaacgaggagacgacagaagatgttggcaaggtgaagattgtggcctgcgat 473 | ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| Sbjct: 450 tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat 509 Query: 474 tccaaattactcagccaataacttgcttactgcga 508 |||||| |||||||||||||| ||| | ||||||| Sbjct: 510 tccaaactactcagccaataaattgataactgcga 544 Score = 77.8 bits (39), Expect = 6e-11 Identities = 72/82 (87%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 561 actgcaccaccacattgctgttttcataatcaatgtgtatctatacaatcttctgtgcta 620 |||| |||||||||||| | ||||||||||||||||| || |||||||| | ||||||| Sbjct: 606 actgtaccaccacattgtttgtttcataatcaatgtgtgtcaatacaatcgtatgtgcta 665 Query: 621 ccagag--tatcacagcagcaa 640 |||||| |||||||||||||| Sbjct: 666 ccagagtatatcacagcagcaa 687 >gb|AY643717.1| Oryza sativa (indica cultivar-group) transcription factor IIA gamma subunit (TFIIAy) mRNA, partial cds Length = 318 Score = 361 bits (182), Expect = 3e-96 Identities = 284/318 (89%) Strand = Plus / Plus Query: 174 atggccaccttcgagctgtaccggaggtccagcattggcatgtgcctcactgagacgctg 233 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc 60 Query: 234 gacgagatggtctccagtggcactctcagccctgagctcgccattcaagtgcttgtccag 293 ||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 61 gacgagatggtctccagcggcaccctcagcccggagcttgccattcaagttcttgtccag 120 Query: 294 tttgataagtctatgaccgaggcgttagaaaaccaagtgaagagcaagtcttctattaag 353 ||||||||||||||||| || || || || |||||||| ||||||||| |||||| ||| Sbjct: 121 tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag 180 Query: 354 ggccatcttcacacctacaggttttgtgacaatgtctggacattcatcttgcaagatgcc 413 ||||| || ||||| |||||||| ||||||||||| ||||||||||||||| || || Sbjct: 181 ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca 240 Query: 414 actttcaagaacgaggagacgacagaagatgttggcaaggtgaagattgtggcctgcgat 473 | ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| Sbjct: 241 tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat 300 Query: 474 tccaaattactcagccaa 491 |||||| ||||||||||| Sbjct: 301 tccaaactactcagccaa 318 >gb|AY643716.1| Oryza sativa (indica cultivar-group) transcription factor IIA gamma subunit (TFIIAy) mRNA, partial cds Length = 318 Score = 353 bits (178), Expect = 7e-94 Identities = 283/318 (88%) Strand = Plus / Plus Query: 174 atggccaccttcgagctgtaccggaggtccagcattggcatgtgcctcactgagacgctg 233 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 atggccaccttcgagctctaccggaggtccaccattggcatgtgcctcactgagacgctc 60 Query: 234 gacgagatggtctccagtggcactctcagccctgagctcgccattcaagtgcttgtccag 293 ||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||| ||| Sbjct: 61 gacgagatggtctccagcggcaccctcagcccggagctcgccattcaagttcttgagcag 120 Query: 294 tttgataagtctatgaccgaggcgttagaaaaccaagtgaagagcaagtcttctattaag 353 ||||||||||||||||| || || || || |||||||| ||||||||| |||||| ||| Sbjct: 121 tttgataagtctatgacggaagccttggagaaccaagtcaagagcaaggtttctatcaag 180 Query: 354 ggccatcttcacacctacaggttttgtgacaatgtctggacattcatcttgcaagatgcc 413 ||||| || ||||| |||||||| ||||||||||| ||||||||||||||| || || Sbjct: 181 ggccacctgcacacttacaggttctgtgacaatgtatggacattcatcttgactgaagca 240 Query: 414 actttcaagaacgaggagacgacagaagatgttggcaaggtgaagattgtggcctgcgat 473 | ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||| Sbjct: 241 tcattcaagaacgaggagactacagaacaagttggcaaggtgaagattgtggcctgtgat 300 Query: 474 tccaaattactcagccaa 491 |||||| ||||||||||| Sbjct: 301 tccaaactactcagccaa 318