BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007e19 (600 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001065286.1| Oryza sativa (japonica cultivar-group) Os07g... 369 9e-99 dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 9e-99 gb|AY107008.1| Zea mays PCO148957 mRNA sequence 262 1e-66 gb|DQ185892.1| Sorghum bicolor hypothetical protein mRNA, comple... 230 5e-57 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 212 1e-51 >ref|NM_001065286.1| Oryza sativa (japonica cultivar-group) Os07g0114300 (Os07g0114300) mRNA, complete cds Length = 559 Score = 369 bits (186), Expect = 9e-99 Identities = 391/456 (85%), Gaps = 25/456 (5%) Strand = Plus / Plus Query: 107 atgggcggcggcaatgcccagaagtctaagatggcgagggagaagaactcggagaagaac 166 |||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 107 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 166 Query: 167 aaggccgccaaggggagtcagcttgaggccaacaagaaggccatgaacatccagtgcaag 226 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 226 Query: 227 gtatgcatgcagaccttcatctgcaccacctctgaaacaaagtgcaaagaacatgctgag 286 ||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 227 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 286 Query: 287 gcgaagcatccgaagaacgacctcacccagtgcttcccccacctcaagaaatagtggcag 346 |||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||| | Sbjct: 287 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaaataatggcgg 346 Query: 347 tgacatct----gctcaatcaga---gagagagagaagctgtcgtaatccactagtatta 399 || ||||| ||||||||||| || | |||||||||| | |||||||||||||| | Sbjct: 347 tggcatctctctgctcaatcagaagagaaaaagagaagctgccataatccactagtatca 406 Query: 400 tcatgtatgcca---ctggttgccctatgtatgggtctgaccgtctgagctttggtctgc 456 || ||||||| | ||||||||||||||||||||||| | | ||||||| || Sbjct: 407 tcttgtatgcaatgactggttgccctatgtatgggtctaaac--------tttggtcagc 458 Query: 457 tgctgctgcagctgctttggttgtgtgccccatct-aatatgtaatccttcactatcagc 515 ||||||| ||| ||||||||||||||| ||||| |||||||||| || |||||| | Sbjct: 459 tgctgct---gcttctttggttgtgtgcctcatctaaatatgtaatgct---ctatcaac 512 Query: 516 ctgttgtgctactatattaatcctttgcggatttgc 551 || |||||| || ||||||||| | || |||||||| Sbjct: 513 ctcttgtgcaacgatattaatcttgtgtggatttgc 548 >dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A07, full insert sequence Length = 559 Score = 369 bits (186), Expect = 9e-99 Identities = 391/456 (85%), Gaps = 25/456 (5%) Strand = Plus / Plus Query: 107 atgggcggcggcaatgcccagaagtctaagatggcgagggagaagaactcggagaagaac 166 |||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 107 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 166 Query: 167 aaggccgccaaggggagtcagcttgaggccaacaagaaggccatgaacatccagtgcaag 226 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 226 Query: 227 gtatgcatgcagaccttcatctgcaccacctctgaaacaaagtgcaaagaacatgctgag 286 ||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||| Sbjct: 227 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 286 Query: 287 gcgaagcatccgaagaacgacctcacccagtgcttcccccacctcaagaaatagtggcag 346 |||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||| | Sbjct: 287 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaaataatggcgg 346 Query: 347 tgacatct----gctcaatcaga---gagagagagaagctgtcgtaatccactagtatta 399 || ||||| ||||||||||| || | |||||||||| | |||||||||||||| | Sbjct: 347 tggcatctctctgctcaatcagaagagaaaaagagaagctgccataatccactagtatca 406 Query: 400 tcatgtatgcca---ctggttgccctatgtatgggtctgaccgtctgagctttggtctgc 456 || ||||||| | ||||||||||||||||||||||| | | ||||||| || Sbjct: 407 tcttgtatgcaatgactggttgccctatgtatgggtctaaac--------tttggtcagc 458 Query: 457 tgctgctgcagctgctttggttgtgtgccccatct-aatatgtaatccttcactatcagc 515 ||||||| ||| ||||||||||||||| ||||| |||||||||| || |||||| | Sbjct: 459 tgctgct---gcttctttggttgtgtgcctcatctaaatatgtaatgct---ctatcaac 512 Query: 516 ctgttgtgctactatattaatcctttgcggatttgc 551 || |||||| || ||||||||| | || |||||||| Sbjct: 513 ctcttgtgcaacgatattaatcttgtgtggatttgc 548 >gb|AY107008.1| Zea mays PCO148957 mRNA sequence Length = 672 Score = 262 bits (132), Expect = 1e-66 Identities = 210/236 (88%) Strand = Plus / Plus Query: 106 catgggcggcggcaatgcccagaagtctaagatggcgagggagaagaactcggagaagaa 165 ||||||||||||||| | ||||||||| ||||||||| | |||| |||| | |||||||| Sbjct: 107 catgggcggcggcaacggccagaagtccaagatggcgcgcgagaggaacgccgagaagaa 166 Query: 166 caaggccgccaaggggagtcagcttgaggccaacaagaaggccatgaacatccagtgcaa 225 ||||| || ||| || || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 167 caagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaa 226 Query: 226 ggtatgcatgcagaccttcatctgcaccacctctgaaacaaagtgcaaagaacatgctga 285 | | ||||||||||||||||||||||||||||| || | ||||||||||||||||| || Sbjct: 227 gatctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcgga 286 Query: 286 ggcgaagcatccgaagaacgacctcacccagtgcttcccccacctcaagaaatagt 341 ||||| |||||| |||||||||||| |||||||||||||||||||||||| |||| Sbjct: 287 ggcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaattagt 342 >gb|DQ185892.1| Sorghum bicolor hypothetical protein mRNA, complete cds Length = 489 Score = 230 bits (116), Expect = 5e-57 Identities = 206/236 (87%) Strand = Plus / Plus Query: 106 catgggcggcggcaatgcccagaagtctaagatggcgagggagaagaactcggagaagaa 165 ||||||||||||||| | ||||||||| ||||||||| |||||| |||| | |||||||| Sbjct: 2 catgggcggcggcaacggccagaagtccaagatggcgcgggagaggaacgccgagaagaa 61 Query: 166 caaggccgccaaggggagtcagcttgaggccaacaagaaggccatgaacatccagtgcaa 225 ||||| | |||| || |||||||| ||| | ||||||||||||||||||||||||||||| Sbjct: 62 caagggctccaaaggcagtcagctggagacaaacaagaaggccatgaacatccagtgcaa 121 Query: 226 ggtatgcatgcagaccttcatctgcaccacctctgaaacaaagtgcaaagaacatgctga 285 | | || |||||||| || ||||||||||||||||| | ||||||||||| ||||| || Sbjct: 122 gatctgtatgcagacttttatctgcaccacctctgaggccaagtgcaaagagcatgccga 181 Query: 286 ggcgaagcatccgaagaacgacctcacccagtgcttcccccacctcaagaaatagt 341 ||||| |||||| ||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 182 ggcgaggcatcccaagaatgacctctaccagtgcttcccccacctcaagaattagt 237 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 212 bits (107), Expect = 1e-51 Identities = 288/345 (83%), Gaps = 25/345 (7%) Strand = Plus / Plus Query: 218 cagtgcaaggtatgcatgcagaccttcatctgcaccacctctgaaacaaagtgcaaagaa 277 ||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 797600 cagtgcaagatatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagag 797659 Query: 278 catgctgaggcgaagcatccgaagaacgacctcacccagtgcttcccccacctcaagaaa 337 ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 797660 catgctgaggcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaaa 797719 Query: 338 tagtggcagtgacatct----gctcaatcaga---gagagagagaagctgtcgtaatcca 390 || |||| ||| ||||| ||||||||||| || | |||||||||| | ||||||| Sbjct: 797720 taatggcggtggcatctctctgctcaatcagaagagaaaaagagaagctgccataatcca 797779 Query: 391 ctagtattatcatgtatgcca---ctggttgccctatgtatgggtctgaccgtctgagct 447 ||||||| ||| ||||||| | ||||||||||||||||||||||| | | | Sbjct: 797780 ctagtatcatcttgtatgcaatgactggttgccctatgtatgggtctaaac--------t 797831 Query: 448 ttggtctgctgctgctgcagctgctttggttgtgtgccccatct-aatatgtaatccttc 506 |||||| ||||||||| ||| ||||||||||||||| ||||| |||||||||| || Sbjct: 797832 ttggtcagctgctgct---gcttctttggttgtgtgcctcatctaaatatgtaatgct-- 797886 Query: 507 actatcagcctgttgtgctactatattaatcctttgcggatttgc 551 |||||| ||| |||||| || ||||||||| | || |||||||| Sbjct: 797887 -ctatcaacctcttgtgcaacgatattaatcttgtgtggatttgc 797930 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 107 atgggcggcggcaatgcccagaagtctaagatggcgagggagaagaactcggagaagaac 166 |||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| Sbjct: 796572 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 796631 Query: 167 aaggccgccaaggg 180 |||| ||||||||| Sbjct: 796632 aagggcgccaaggg 796645