BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst007b11 (598 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245642.1| Zea mays clone 18641 mRNA sequence 480 e-132 emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger pr... 448 e-122 emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribos... 438 e-119 emb|CT830448.1| Oryza sativa (indica cultivar-group) cDNA clone:... 377 e-101 emb|CT830447.1| Oryza sativa (indica cultivar-group) cDNA clone:... 377 e-101 >gb|DQ245642.1| Zea mays clone 18641 mRNA sequence Length = 647 Score = 480 bits (242), Expect = e-132 Identities = 290/306 (94%) Strand = Plus / Plus Query: 44 ggagaccagagagcgcggagcccgagcaaaccctagcctcccaccatggtgctccagaac 103 |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| Sbjct: 50 ggagaccagagagcgcggttcccgagcaaaccctagcctcccacgatggtgctgcagaac 109 Query: 104 gacatcgacctgctgaacccgccggcggagttcgagaagctcaagcacaagaagaagcgc 163 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 169 Query: 164 ctcgtccagtcccccaactccttcttcatggatgtcaagtgccagggctgcttcaacatc 223 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 170 ctcgtccagtcccccaattccttcttcatggacgtcaagtgccagggctgcttcaacatc 229 Query: 224 actactgtgttcagccactcccagaccgtcgtggtctgcccaggctgccaaaccgtgctc 283 |||||||||||||||||||| ||||| || ||||| ||||||||||||||||| |||||| Sbjct: 230 actactgtgttcagccactcacagactgttgtggtgtgcccaggctgccaaacagtgctc 289 Query: 284 tgccagccgacgggtggaaaggccaggctaaccgagggatgctccttccgccgcaagggc 343 |||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 290 tgccagccaacgggtggtaaggccaggctcaccgagggttgctccttccgccgcaagggc 349 Query: 344 gactaa 349 |||||| Sbjct: 350 gactaa 355 >emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger protein Length = 493 Score = 448 bits (226), Expect = e-122 Identities = 271/286 (94%) Strand = Plus / Plus Query: 64 cccgagcaaaccctagcctcccaccatggtgctccagaacgacatcgacctgctgaaccc 123 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 10 cccgagcaagccctagcctcccacgatggtgctgcagaacgacatcgacctgctgaaccc 69 Query: 124 gccggcggagttcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactc 183 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gccggcggagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactc 129 Query: 184 cttcttcatggatgtcaagtgccagggctgcttcaacatcactactgtgttcagccactc 243 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130 cttcttcatggacgtcaagtgccagggctgcttcaacatcactactgtgttcagccattc 189 Query: 244 ccagaccgtcgtggtctgcccaggctgccaaaccgtgctctgccagccgacgggtggaaa 303 |||||| || ||||| |||||||||||||| || |||||||||||||| |||||||| || Sbjct: 190 ccagactgttgtggtgtgcccaggctgccagacggtgctctgccagccaacgggtggcaa 249 Query: 304 ggccaggctaaccgagggatgctccttccgccgcaagggcgactaa 349 |||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 250 ggccaggctaaccgagggttgctccttccgtcgcaagggcgactaa 295 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 414 gtctgaaaattttgcaatgtccgcaaagtgaacccatgtttggtaattt 462 ||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 355 gtctgaaaattttgcaatgtcggcaaagtgaacccatctttggtaattt 403 >emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27A gene) Length = 596 Score = 438 bits (221), Expect = e-119 Identities = 272/289 (94%) Strand = Plus / Plus Query: 61 gagcccgagcaaaccctagcctcccaccatggtgctccagaacgacatcgacctgctgaa 120 |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 39 gagcgcgagcaaaccctagcctcccacgatggtgctgcagaacgacatcgacctgctcaa 98 Query: 121 cccgccggcggagttcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaa 180 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 cccgccggccgagctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaa 158 Query: 181 ctccttcttcatggatgtcaagtgccagggctgcttcaacatcactactgtgttcagcca 240 ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 159 ctctttcttcatggacgtcaagtgccagggttgcttcaacatcactactgtgttcagcca 218 Query: 241 ctcccagaccgtcgtggtctgcccaggctgccaaaccgtgctctgccagccgacgggtgg 300 ||||||||| |||||||| ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 219 ctcccagactgtcgtggtgtgcccaggctgccaaacagtgctctgccagccaaccggtgg 278 Query: 301 aaaggccaggctaaccgagggatgctccttccgccgcaagggcgactaa 349 |||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 279 caaggccaggctaactgagggctgctccttccgccgcaagggcgactaa 327 >emb|CT830448.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030E06, full insert sequence Length = 602 Score = 377 bits (190), Expect = e-101 Identities = 238/254 (93%) Strand = Plus / Plus Query: 87 ccatggtgctccagaacgacatcgacctgctgaacccgccggcggagttcgagaagctca 146 ||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||| Sbjct: 96 ccatggtgctctccaacgacatcgacctgctgaacccgcccgcggagctggagaagctca 155 Query: 147 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 215 Query: 207 agggctgcttcaacatcactactgtgttcagccactcccagaccgtcgtggtctgcccag 266 |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 216 agggctgcttcagcatcactactgtgttcagccactcccagacagtggtggtctgcccgg 275 Query: 267 gctgccaaaccgtgctctgccagccgacgggtggaaaggccaggctaaccgagggatgct 326 |||||||||||||||| |||||||| || |||||||||||||||||||| ||||| || | Sbjct: 276 gctgccaaaccgtgctttgccagcctacaggtggaaaggccaggctaacggaggggtgtt 335 Query: 327 ccttccgccgcaag 340 |||||||||||||| Sbjct: 336 ccttccgccgcaag 349 Score = 89.7 bits (45), Expect = 1e-14 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 395 cttagttt-tccaggatgtagtctgaaaattttgcaatgtccgcaaagtgaa-cccatgt 452 |||||||| |||||||||||||||||||||||||||||| | | ||||||| ||||||| Sbjct: 403 cttagtttctccaggatgtagtctgaaaattttgcaatgcctgtcaagtgaaccccatgt 462 Query: 453 ttggtaatttaatctct 469 ||||||||||||||||| Sbjct: 463 ttggtaatttaatctct 479 >emb|CT830447.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA013L10, full insert sequence Length = 586 Score = 377 bits (190), Expect = e-101 Identities = 238/254 (93%) Strand = Plus / Plus Query: 87 ccatggtgctccagaacgacatcgacctgctgaacccgccggcggagttcgagaagctca 146 ||||||||||| |||||||||||||||||||||||||| |||||| | |||||||||| Sbjct: 94 ccatggtgctctccaacgacatcgacctgctgaacccgcccgcggagctggagaagctca 153 Query: 147 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 agcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgcc 213 Query: 207 agggctgcttcaacatcactactgtgttcagccactcccagaccgtcgtggtctgcccag 266 |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| | Sbjct: 214 agggctgcttcagcatcactactgtgttcagccactcccagacagtggtggtctgcccgg 273 Query: 267 gctgccaaaccgtgctctgccagccgacgggtggaaaggccaggctaaccgagggatgct 326 |||||||||||||||| |||||||| || |||||||||||||||||||| ||||| || | Sbjct: 274 gctgccaaaccgtgctttgccagcctacaggtggaaaggccaggctaacggaggggtgtt 333 Query: 327 ccttccgccgcaag 340 |||||||||||||| Sbjct: 334 ccttccgccgcaag 347 Score = 89.7 bits (45), Expect = 1e-14 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 395 cttagttt-tccaggatgtagtctgaaaattttgcaatgtccgcaaagtgaa-cccatgt 452 |||||||| |||||||||||||||||||||||||||||| | | ||||||| ||||||| Sbjct: 400 cttagtttctccaggatgtagtctgaaaattttgcaatgcctgtcaagtgaaccccatgt 459 Query: 453 ttggtaatttaatctct 469 ||||||||||||||||| Sbjct: 460 ttggtaatttaatctct 476