BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst006o03
         (862 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DQ246196.1| Zea mays clone 16826 mRNA sequence                     167   9e-38
gb|AY105718.1| Zea mays PCO143465 mRNA sequence                       167   9e-38
ref|NM_001056384.1| Oryza sativa (japonica cultivar-group) Os03g...   117   8e-23
gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str...   117   8e-23
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   117   8e-23

>gb|DQ246196.1| Zea mays clone 16826 mRNA sequence
          Length = 824

 Score =  167 bits (84), Expect = 9e-38
 Identities = 155/179 (86%), Gaps = 6/179 (3%)
 Strand = Plus / Plus

                                                                       
Query: 426 ctactgggtgcacgcctggacggtgggcccggatggggtgatcacccagctgcgcgagta 485
           ||||||||||||||||||||| ||||| || |||||||||||||||||||| || |||||
Sbjct: 445 ctactgggtgcacgcctggaccgtgggacccgatggggtgatcacccagctccgtgagta 504

                                                                       
Query: 486 cttcaacaccgacctcatcgtcacccgcct------cgccggcgcttccaagtgcatctg 539
           ||||||||||||||||| ||||||||||||      ||||| |||  |||||||| ||||
Sbjct: 505 cttcaacaccgacctcaccgtcacccgcctcgccgccgccgtcgccgccaagtgcgtctg 564

                                                                      
Query: 540 gcagagccgccgccccgaccacgcccgcaactccctcccgggcctcgtcctcgccctct 598
           |||||||||||||||||||  ||||  ||||||||| ||||| ||| | ||||||||||
Sbjct: 565 gcagagccgccgccccgacagcgccaccaactccctgccgggactcctgctcgccctct 623



 Score =  153 bits (77), Expect = 1e-33
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 181 cagcgcaacaagttcctcgtcctccgcctctacgaggcgctcaacgcccgcgaccacgcc 240
           ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 188 cagcgcaacaagttcctggtcctccgcctgtacgaggcgctcaacgcccgggaccacgcc 247

                                                                       
Query: 241 gccgtccagggactcctcgcccccgacctggagtggtggttccatggcccgcccgcgcac 300
           ||||| |||   || || || |||||||||||||||||||||||||||||||||  ||||
Sbjct: 248 gccgtgcagtcgctgctggcgcccgacctggagtggtggttccatggcccgcccaagcac 307

                
Query: 301 cagca 305
           |||||
Sbjct: 308 cagca 312


>gb|AY105718.1| Zea mays PCO143465 mRNA sequence
          Length = 815

 Score =  167 bits (84), Expect = 9e-38
 Identities = 155/179 (86%), Gaps = 6/179 (3%)
 Strand = Plus / Plus

                                                                       
Query: 426 ctactgggtgcacgcctggacggtgggcccggatggggtgatcacccagctgcgcgagta 485
           ||||||||||||||||||||| ||||| || |||||||||||||||||||| || |||||
Sbjct: 448 ctactgggtgcacgcctggaccgtgggacccgatggggtgatcacccagctccgtgagta 507

                                                                       
Query: 486 cttcaacaccgacctcatcgtcacccgcct------cgccggcgcttccaagtgcatctg 539
           ||||||||||||||||| ||||||||||||      ||||| |||  |||||||| ||||
Sbjct: 508 cttcaacaccgacctcaccgtcacccgcctcgccgccgccgtcgccgccaagtgcgtctg 567

                                                                      
Query: 540 gcagagccgccgccccgaccacgcccgcaactccctcccgggcctcgtcctcgccctct 598
           |||||||||||||||||||  ||||  ||||||||| ||||| ||| | ||||||||||
Sbjct: 568 gcagagccgccgccccgacagcgccaccaactccctgccgggactcctgctcgccctct 626



 Score =  153 bits (77), Expect = 1e-33
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 181 cagcgcaacaagttcctcgtcctccgcctctacgaggcgctcaacgcccgcgaccacgcc 240
           ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 191 cagcgcaacaagttcctggtcctccgcctgtacgaggcgctcaacgcccgggaccacgcc 250

                                                                       
Query: 241 gccgtccagggactcctcgcccccgacctggagtggtggttccatggcccgcccgcgcac 300
           ||||| |||   || || || |||||||||||||||||||||||||||||||||  ||||
Sbjct: 251 gccgtgcagtcgctgctggcgcccgacctggagtggtggttccatggcccgcccaagcac 310

                
Query: 301 cagca 305
           |||||
Sbjct: 311 cagca 315


>ref|NM_001056384.1| Oryza sativa (japonica cultivar-group) Os03g0299600 (Os03g0299600)
           mRNA, partial cds
          Length = 1196

 Score =  117 bits (59), Expect = 8e-23
 Identities = 83/91 (91%)
 Strand = Plus / Plus

                                                                       
Query: 426 ctactgggtgcacgcctggacggtgggcccggatggggtgatcacccagctgcgcgagta 485
           ||||||||||||||||||||| || ||||| |||||||| |||||||||||  | |||||
Sbjct: 532 ctactgggtgcacgcctggaccgtcggccccgatggggtaatcacccagctcagggagta 591

                                          
Query: 486 cttcaacaccgacctcatcgtcacccgcctc 516
           ||||||||||||||||| |||||||||||||
Sbjct: 592 cttcaacaccgacctcaccgtcacccgcctc 622



 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 256 ctcgcccccgacctggagtggtggttccatggcccgcccgcgcaccagcacatgatgcgc 315
           ||||| || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 362 ctcgcgccggacctcgagtggtggttccatgggccgccggcgcaccagcacatgatgcgc 421

                   
Query: 316 atcctcac 323
            |||||||
Sbjct: 422 ctcctcac 429



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 358 cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 398
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 510


>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score =  117 bits (59), Expect = 8e-23
 Identities = 83/91 (91%)
 Strand = Plus / Minus

                                                                         
Query: 426   ctactgggtgcacgcctggacggtgggcccggatggggtgatcacccagctgcgcgagta 485
             ||||||||||||||||||||| || ||||| |||||||| |||||||||||  | |||||
Sbjct: 45628 ctactgggtgcacgcctggaccgtcggccccgatggggtaatcacccagctcagggagta 45569

                                            
Query: 486   cttcaacaccgacctcatcgtcacccgcctc 516
             ||||||||||||||||| |||||||||||||
Sbjct: 45568 cttcaacaccgacctcaccgtcacccgcctc 45538



 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 256   ctcgcccccgacctggagtggtggttccatggcccgcccgcgcaccagcacatgatgcgc 315
             ||||| || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 45798 ctcgcgccggacctcgagtggtggttccatgggccgccggcgcaccagcacatgatgcgc 45739

                     
Query: 316   atcctcac 323
              |||||||
Sbjct: 45738 ctcctcac 45731



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                      
Query: 358   cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 398
             |||||||||||||||||||||||||||||||||||||||||
Sbjct: 45690 cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 45650


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  117 bits (59), Expect = 8e-23
 Identities = 83/91 (91%)
 Strand = Plus / Minus

                                                                            
Query: 426      ctactgggtgcacgcctggacggtgggcccggatggggtgatcacccagctgcgcgagta 485
                ||||||||||||||||||||| || ||||| |||||||| |||||||||||  | |||||
Sbjct: 10487916 ctactgggtgcacgcctggaccgtcggccccgatggggtaatcacccagctcagggagta 10487857

                                               
Query: 486      cttcaacaccgacctcatcgtcacccgcctc 516
                ||||||||||||||||| |||||||||||||
Sbjct: 10487856 cttcaacaccgacctcaccgtcacccgcctc 10487826



 Score = 87.7 bits (44), Expect = 7e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                            
Query: 256      ctcgcccccgacctggagtggtggttccatggcccgcccgcgcaccagcacatgatgcgc 315
                ||||| || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 10488086 ctcgcgccggacctcgagtggtggttccatgggccgccggcgcaccagcacatgatgcgc 10488027

                        
Query: 316      atcctcac 323
                 |||||||
Sbjct: 10488026 ctcctcac 10488019



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                         
Query: 358      cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 398
                |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10487978 cgctccgtcgacgccttcggctccaccgtcatcgccgaggg 10487938