BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst006l06 (852 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g... 519 e-144 dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 194 4e-46 emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 194 4e-46 emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:... 143 1e-30 >ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g0605400 (Os12g0605400) mRNA, complete cds Length = 923 Score = 519 bits (262), Expect = e-144 Identities = 400/446 (89%) Strand = Plus / Plus Query: 130 gctggaatggcgtcgagtggagatccatccggagttgtcgtgccaaggaacttcagactg 189 ||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||||| Sbjct: 195 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 254 Query: 190 ctagaagagcttgagaggggagagaagggcatcggggatggaacagttagctatggaatg 249 ||||||||||||||||| || |||||||||||||| |||||| |||| |||||||||||| Sbjct: 255 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 314 Query: 250 gatgacgcggatgatatctacatgcgctcttggacaggcacaataataggtccccacaac 309 ||||| || || |||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 315 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataac 374 Query: 310 accgtccacgagggccgaatttatcagttaaagcttttctgtgacaaggactatccagac 369 || ||||| |||||||| || || || | ||||||||||| ||||||||||| |||||| Sbjct: 375 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 434 Query: 370 aggtcaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatcctgagact 429 ||| |||||||||| | |||||||||||||||||| ||||| |||||||| || |||| | Sbjct: 435 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaat 494 Query: 430 ggagtggtcgatcaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatg 489 ||| |||| || ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 495 ggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatg 554 Query: 490 gaggttatcttgacacagcttaagaaagaaatggcagcatcacataaccggaaattagtg 549 |||| ||||||||| || ||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 555 gaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtg 614 Query: 550 cagcctccagaggggacattcttcta 575 |||||||||||||||||||||||||| Sbjct: 615 cagcctccagaggggacattcttcta 640 >dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 519 bits (262), Expect = e-144 Identities = 400/446 (89%) Strand = Plus / Plus Query: 130 gctggaatggcgtcgagtggagatccatccggagttgtcgtgccaaggaacttcagactg 189 ||||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||||| Sbjct: 196 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 255 Query: 190 ctagaagagcttgagaggggagagaagggcatcggggatggaacagttagctatggaatg 249 ||||||||||||||||| || |||||||||||||| |||||| |||| |||||||||||| Sbjct: 256 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 315 Query: 250 gatgacgcggatgatatctacatgcgctcttggacaggcacaataataggtccccacaac 309 ||||| || || |||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 316 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataac 375 Query: 310 accgtccacgagggccgaatttatcagttaaagcttttctgtgacaaggactatccagac 369 || ||||| |||||||| || || || | ||||||||||| ||||||||||| |||||| Sbjct: 376 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 435 Query: 370 aggtcaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatcctgagact 429 ||| |||||||||| | |||||||||||||||||| ||||| |||||||| || |||| | Sbjct: 436 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaat 495 Query: 430 ggagtggtcgatcaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatg 489 ||| |||| || ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 496 ggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatg 555 Query: 490 gaggttatcttgacacagcttaagaaagaaatggcagcatcacataaccggaaattagtg 549 |||| ||||||||| || ||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 556 gaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtg 615 Query: 550 cagcctccagaggggacattcttcta 575 |||||||||||||||||||||||||| Sbjct: 616 cagcctccagaggggacattcttcta 641 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 194 bits (98), Expect = 4e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 442 caaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggaggttatcttg 501 ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 25592886 caaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttg 25592827 Query: 502 acacagcttaagaaagaaatggcagcatcacataaccggaaattagtgcagcctccagag 561 || || ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 25592826 acccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctccagag 25592767 Query: 562 gggacattcttcta 575 |||||||||||||| Sbjct: 25592766 gggacattcttcta 25592753 Score = 184 bits (93), Expect = 4e-43 Identities = 126/137 (91%) Strand = Plus / Minus Query: 169 gtgccaaggaacttcagactgctagaagagcttgagaggggagagaagggcatcggggat 228 ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 25593373 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 25593314 Query: 229 ggaacagttagctatggaatggatgacgcggatgatatctacatgcgctcttggacaggc 288 ||| |||| ||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 25593313 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 25593254 Query: 289 acaataataggtcccca 305 ||||| || |||||||| Sbjct: 25593253 acaattattggtcccca 25593237 Score = 107 bits (54), Expect = 7e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 340 aagcttttctgtgacaaggactatccagacaggtcaccaactgttagatttcactcaaga 399 ||||||||||| ||||||||||| ||||||||| |||||||||| | ||||||||||||| Sbjct: 25593079 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 25593020 Query: 400 atcaatatgacttgtgtaaatcctgagactggagtggt 437 ||||| ||||| |||||||| || |||| |||| |||| Sbjct: 25593019 atcaacatgacctgtgtaaacccagagaatggattggt 25592982 >emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 194 bits (98), Expect = 4e-46 Identities = 125/134 (93%) Strand = Plus / Plus Query: 442 caaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggaggttatcttg 501 ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 80832 caaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatcttg 80891 Query: 502 acacagcttaagaaagaaatggcagcatcacataaccggaaattagtgcagcctccagag 561 || || ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 80892 acccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctccagag 80951 Query: 562 gggacattcttcta 575 |||||||||||||| Sbjct: 80952 gggacattcttcta 80965 Score = 184 bits (93), Expect = 4e-43 Identities = 126/137 (91%) Strand = Plus / Plus Query: 169 gtgccaaggaacttcagactgctagaagagcttgagaggggagagaagggcatcggggat 228 ||||| |||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 80345 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 80404 Query: 229 ggaacagttagctatggaatggatgacgcggatgatatctacatgcgctcttggacaggc 288 ||| |||| ||||||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 80405 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 80464 Query: 289 acaataataggtcccca 305 ||||| || |||||||| Sbjct: 80465 acaattattggtcccca 80481 Score = 107 bits (54), Expect = 7e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 340 aagcttttctgtgacaaggactatccagacaggtcaccaactgttagatttcactcaaga 399 ||||||||||| ||||||||||| ||||||||| |||||||||| | ||||||||||||| Sbjct: 80639 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 80698 Query: 400 atcaatatgacttgtgtaaatcctgagactggagtggt 437 ||||| ||||| |||||||| || |||| |||| |||| Sbjct: 80699 atcaacatgacctgtgtaaacccagagaatggattggt 80736 >emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051B14, full insert sequence Length = 852 Score = 143 bits (72), Expect = 1e-30 Identities = 210/256 (82%) Strand = Plus / Plus Query: 178 aacttcagactgctagaagagcttgagaggggagagaagggcatcggggatggaacagtt 237 |||||||| |||||||||||||||| | || || |||||||| || |||||||| || Sbjct: 155 aacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtg 214 Query: 238 agctatggaatggatgacgcggatgatatctacatgcgctcttggacaggcacaataata 297 ||||||||||||||||| || ||||| ||||||||||| |||||||| ||||| || || Sbjct: 215 agctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcatt 274 Query: 298 ggtccccacaacaccgtccacgagggccgaatttatcagttaaagcttttctgtgacaag 357 ||||| || || | ||||| || || || || || ||| | ||||| |||||||||||| Sbjct: 275 ggtccacataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaag 334 Query: 358 gactatccagacaggtcaccaactgttagatttcactcaagaatcaatatgacttgtgta 417 ||||| ||||| | | ||||| |||| | ||||| ||||||||||||||| | ||||| Sbjct: 335 gactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgtt 394 Query: 418 aatcctgagactggag 433 |||| ||||||||||| Sbjct: 395 aatcatgagactggag 410