BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst006i20 (764 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061327.1| Oryza sativa (japonica cultivar-group) Os05g... 180 5e-42 gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 180 5e-42 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 180 5e-42 dbj|AK071729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 5e-42 gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 157 8e-35 >ref|NM_001061327.1| Oryza sativa (japonica cultivar-group) Os05g0176700 (Os05g0176700) mRNA, complete cds Length = 751 Score = 180 bits (91), Expect = 5e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 354 cgttcgtgggggcgctcacggaggagaaggcgcgggagctgcgggcgcggatggtggaga 413 |||||||||| | | | |||||||||||||||||||||||||| || |||||||||||| Sbjct: 294 cgttcgtgggcgggttgacggaggagaaggcgcgggagctgcgcgcaaggatggtggaga 353 Query: 414 cggagagctaccacgacgcaatgtaccactccgccatcgcctcccgcctcgcccgctccg 473 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 354 cggagagcttccacgacgccatgtaccactccgccatcgcctcccgcctcgcccgctccg 413 Query: 474 cctaggc 480 ||||||| Sbjct: 414 cctaggc 420 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggccgcg 292 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 185 ggcaagtggtgggcgccgctgctggggtggtcggggaaggccgactacatcgaggccccg 244 Query: 293 gcgccgg 299 ||||||| Sbjct: 245 gcgccgg 251 >gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 180 bits (91), Expect = 5e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 354 cgttcgtgggggcgctcacggaggagaaggcgcgggagctgcgggcgcggatggtggaga 413 |||||||||| | | | |||||||||||||||||||||||||| || |||||||||||| Sbjct: 45158 cgttcgtgggcgggttgacggaggagaaggcgcgggagctgcgcgcaaggatggtggaga 45099 Query: 414 cggagagctaccacgacgcaatgtaccactccgccatcgcctcccgcctcgcccgctccg 473 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 45098 cggagagcttccacgacgccatgtaccactccgccatcgcctcccgcctcgcccgctccg 45039 Query: 474 cctaggc 480 ||||||| Sbjct: 45038 cctaggc 45032 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggccgcg 292 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 45267 ggcaagtggtgggcgccgctgctggggtggtcggggaaggccgactacatcgaggccccg 45208 Query: 293 gcgccgg 299 ||||||| Sbjct: 45207 gcgccgg 45201 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 180 bits (91), Expect = 5e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 354 cgttcgtgggggcgctcacggaggagaaggcgcgggagctgcgggcgcggatggtggaga 413 |||||||||| | | | |||||||||||||||||||||||||| || |||||||||||| Sbjct: 4534691 cgttcgtgggcgggttgacggaggagaaggcgcgggagctgcgcgcaaggatggtggaga 4534632 Query: 414 cggagagctaccacgacgcaatgtaccactccgccatcgcctcccgcctcgcccgctccg 473 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4534631 cggagagcttccacgacgccatgtaccactccgccatcgcctcccgcctcgcccgctccg 4534572 Query: 474 cctaggc 480 ||||||| Sbjct: 4534571 cctaggc 4534565 Score = 157 bits (79), Expect = 8e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 375 aggagaaggcgcgggagctgcgggcgcggatggtggagacggagagctaccacgacgcaa 434 |||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||| | Sbjct: 5414521 aggagaaggcgcgggagctgcgtgcgaggatggcggagacggagagcttccacgacgcca 5414580 Query: 435 tgtaccactccgccatcgcctcccgcctcgcccgctccgcctaggc-cgccgccg 488 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 5414581 tgtaccactccgccatcgcctcccgcctcgcctactccgcctaggcgcgccgccg 5414635 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggccgcg 292 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 4534800 ggcaagtggtgggcgccgctgctggggtggtcggggaaggccgactacatcgaggccccg 4534741 Query: 293 gcgccgg 299 ||||||| Sbjct: 4534740 gcgccgg 4534734 Score = 87.7 bits (44), Expect = 6e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggc 288 |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 5414451 ggcaagtggtgggcgctgctgctggggtggtcggggaaggccgactacatcgaggc 5414506 >dbj|AK071729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110H11, full insert sequence Length = 754 Score = 180 bits (91), Expect = 5e-42 Identities = 118/127 (92%) Strand = Plus / Plus Query: 354 cgttcgtgggggcgctcacggaggagaaggcgcgggagctgcgggcgcggatggtggaga 413 |||||||||| | | | |||||||||||||||||||||||||| || |||||||||||| Sbjct: 295 cgttcgtgggcgggttgacggaggagaaggcgcgggagctgcgcgcaaggatggtggaga 354 Query: 414 cggagagctaccacgacgcaatgtaccactccgccatcgcctcccgcctcgcccgctccg 473 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 355 cggagagcttccacgacgccatgtaccactccgccatcgcctcccgcctcgcccgctccg 414 Query: 474 cctaggc 480 ||||||| Sbjct: 415 cctaggc 421 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggccgcg 292 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 186 ggcaagtggtgggcgccgctgctggggtggtcggggaaggccgactacatcgaggccccg 245 Query: 293 gcgccgg 299 ||||||| Sbjct: 246 gcgccgg 252 >gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 157 bits (79), Expect = 8e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 375 aggagaaggcgcgggagctgcgggcgcggatggtggagacggagagctaccacgacgcaa 434 |||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||| | Sbjct: 101195 aggagaaggcgcgggagctgcgtgcgaggatggcggagacggagagcttccacgacgcca 101254 Query: 435 tgtaccactccgccatcgcctcccgcctcgcccgctccgcctaggc-cgccgccg 488 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 101255 tgtaccactccgccatcgcctcccgcctcgcctactccgcctaggcgcgccgccg 101309 Score = 87.7 bits (44), Expect = 6e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 233 ggcaagtggtgggcgccgctgctggggtggtcggggcgggccgactacatcgaggc 288 |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 101125 ggcaagtggtgggcgctgctgctggggtggtcggggaaggccgactacatcgaggc 101180