BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst006a22 (990 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ246107.1| Zea mays clone 18339 mRNA sequence 686 0.0 gb|BT016730.1| Zea mays clone Contig563 mRNA sequence 686 0.0 gb|AY109506.1| Zea mays CL7587_1 mRNA sequence 434 e-118 ref|NM_001057310.1| Oryza sativa (japonica cultivar-group) Os03g... 392 e-105 gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 392 e-105 >gb|DQ246107.1| Zea mays clone 18339 mRNA sequence Length = 1032 Score = 686 bits (346), Expect = 0.0 Identities = 610/697 (87%), Gaps = 2/697 (0%) Strand = Plus / Plus Query: 176 gctggcggcgggagacaccaacggggtgtacgagccgtgcagcgacgcgcggatccagcg 235 |||||||| ||| ||||| ||||| || |||||||||||||| ||||| ||||||||||| Sbjct: 113 gctggcggtgggggacacgaacggcgtctacgagccgtgcagtgacgcacggatccagcg 172 Query: 236 cggggacggcttcaccttcggggtagccttcgcgggctacaacgccttcttctccggacc 295 |||||||||||||||||||||||| | |||||| || |||||||||||||||||||| Sbjct: 173 cggggacggcttcaccttcggggtggtcttcgccggatacaacgccttcttctccggcaa 232 Query: 296 cacccagctgtccccctgcgaccgccgcctcaacctcgcttcctccgcccagctcgccgc 355 ||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 233 cacacagctctccccctgcgaccgccgcctcaacctcgctgcctccgggcagctcgccgt 292 Query: 356 cttccgccccaaggtcgacgagatctccctcctcaccatcaacaccaccacaggcttcaa 415 |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 293 cttccgccccaaggtcgacgagatctccctcctcaccatcaacaccactaccggattcaa 352 Query: 416 ccccgcttcagctggtgggttcatggtagcatttgctggtaggaagtatgcagccagatc 475 ||| |||||||||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 353 cccagcttcagctggtggattcatggtagcatttgccggcaggaagtatgcagctagatc 412 Query: 476 tgcaccaatctttgtctccaattcctcatttacagtgtctagcttcacgctggttcttga 535 | || || ||||| ||||| ||||| | |||||||| |||||||| ||||| ||||| Sbjct: 413 tattccgatatttgtatccaacacctcagtcacagtgtccagcttcacactggtacttga 472 Query: 536 attcaaaaaaggcaggctccaaaacttgcactggaagaaggatggctgtggtgcttgctc 595 ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 473 gttcaacaaaggcagactccaaaacttgcactggaagaaggacggctgtggcgcttgctc 532 Query: 596 agggaagtcgaacttcgtttgcctcggcaagcaaacctgcgccatcagaacacaaagctg 655 || |||||||||||||| ||||||||||| || || ||||||||||| || || ||||| Sbjct: 533 cggcaagtcgaacttcgtctgcctcggcaaacagacatgcgccatcaggacgcagagctg 592 Query: 656 caagacccagggacctgtcgactgcagtatcggcatccaactggccttctcaggcaccga 715 ||||| ||| || || ||||||||||| |||||||||| ||||| || | ||||| || Sbjct: 593 caagagccaagggcccgtcgactgcagcgtcggcatccagctggctttgtttggcacgga 652 Query: 716 taagcatgagtcagttctgaactcatggtatgaggtttcaaacctgcggcaatactccct 775 ||||| ||||| ||||||||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 653 caagcacgagtcggttctgaactcgtggtacgaggtctccaacctgaggcagtactccct 712 Query: 776 ctacgggctgtactcgaacctgaaggacaccctgagcggccagttcaacaagttcttcta 835 ||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 713 ctacgggctctactccaacctcaaggacaccctgagcggccagttcaacaagatcttcta 772 Query: 836 ggc--tttcggtgcagctgttgttcattctctcctgc 870 ||| ||| ||||| || ||||| |||||||||||| Sbjct: 773 ggctgttttggtgctgccattgtttattctctcctgc 809 >gb|BT016730.1| Zea mays clone Contig563 mRNA sequence Length = 1046 Score = 686 bits (346), Expect = 0.0 Identities = 610/697 (87%), Gaps = 2/697 (0%) Strand = Plus / Plus Query: 176 gctggcggcgggagacaccaacggggtgtacgagccgtgcagcgacgcgcggatccagcg 235 |||||||| ||| ||||| ||||| || |||||||||||||| ||||| ||||||||||| Sbjct: 209 gctggcggtgggggacacgaacggcgtctacgagccgtgcagtgacgcacggatccagcg 268 Query: 236 cggggacggcttcaccttcggggtagccttcgcgggctacaacgccttcttctccggacc 295 |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| Sbjct: 269 cggggacggcttcaccttcggggtggtcttcgcgggatacaacgccttcttctccggcaa 328 Query: 296 cacccagctgtccccctgcgaccgccgcctcaacctcgcttcctccgcccagctcgccgc 355 ||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 329 cacacagctctccccctgcgaccgccgcctcaacctcgctgcctccgggcagctcgccgt 388 Query: 356 cttccgccccaaggtcgacgagatctccctcctcaccatcaacaccaccacaggcttcaa 415 |||||||||||||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 389 cttccgccccaaggtcgacgagatctccctcctcaccatcaacaccactaccggactcaa 448 Query: 416 ccccgcttcagctggtgggttcatggtagcatttgctggtaggaagtatgcagccagatc 475 ||| |||||||||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 449 cccagcttcagctggtggattcatggtagcatttgccggcaggaagtatgcagctagatc 508 Query: 476 tgcaccaatctttgtctccaattcctcatttacagtgtctagcttcacgctggttcttga 535 | || || ||||| ||||| ||||| | |||||||| |||||||| ||||| ||||| Sbjct: 509 tattccgatatttgtatccaacacctcagtcacagtgtccagcttcacactggtacttga 568 Query: 536 attcaaaaaaggcaggctccaaaacttgcactggaagaaggatggctgtggtgcttgctc 595 ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 569 gttcaacaaaggcagactccaaaacttgcactggaagaaggacggctgtggcgcttgctc 628 Query: 596 agggaagtcgaacttcgtttgcctcggcaagcaaacctgcgccatcagaacacaaagctg 655 || |||||||||||||| ||||||||||| || || ||||||||||| || || ||||| Sbjct: 629 cggcaagtcgaacttcgtctgcctcggcaaacagacatgcgccatcaggacgcagagctg 688 Query: 656 caagacccagggacctgtcgactgcagtatcggcatccaactggccttctcaggcaccga 715 ||||| ||| || || ||||||||||| |||||||||| ||||| ||||| ||||| || Sbjct: 689 caagagccaagggcccgtcgactgcagcgtcggcatccagctggctttctctggcacgga 748 Query: 716 taagcatgagtcagttctgaactcatggtatgaggtttcaaacctgcggcaatactccct 775 ||||| ||||| ||||||||||| ||||| ||||| || |||||| |||| |||||||| Sbjct: 749 caagcacgagtcggttctgaactcgtggtacgaggtgtccaacctgaggcagtactccct 808 Query: 776 ctacgggctgtactcgaacctgaaggacaccctgagcggccagttcaacaagttcttcta 835 ||||||||| ||||| || | |||||||||||||||||||||||||||||| ||||||| Sbjct: 809 ctacgggctctactccaaacccaaggacaccctgagcggccagttcaacaagatcttcta 868 Query: 836 ggct--ttcggtgcagctgttgttcattctctcctgc 870 |||| || ||||| || ||||| |||||||||||| Sbjct: 869 ggctgctttggtgctgccattgtttattctctcctgc 905 >gb|AY109506.1| Zea mays CL7587_1 mRNA sequence Length = 1083 Score = 434 bits (219), Expect = e-118 Identities = 402/462 (87%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 411 ttcaaccccgcttcagctggtgggttcatggtagcatttgctggtaggaagtatgcagcc 470 |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 409 ttcaacccagcttcagctggtggatttatggtagcatttgctggtaggaagtatgcagct 468 Query: 471 agatctgcaccaatctttgtctccaattcctcatttacagtgtctagcttcacgctggtt 530 |||||| || || ||||| ||||| ||||| |||||||||| |||||||| ||||| Sbjct: 469 agatctattccgatatttgtatccaacacctcagttacagtgtccagcttcacactggta 528 Query: 531 cttgaattcaaaaaaggcaggctccaaaacttgcactggaagaaggatggctgtggtgct 590 ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 529 cttgagttcaacaaaggcagactccaaaacttgcactggaagaaggacggctgtggcgct 588 Query: 591 tgctcagggaagtcgaacttcgtttgcctcggcaagcaaacctgcgccatcagaacacaa 650 ||||| || |||||||||||||| ||||||||||| || || ||||||||||| || || Sbjct: 589 tgctccggcaagtcgaacttcgtctgcctcggcaaacagacatgcgccatcaggacgcag 648 Query: 651 agctgcaagacccagggacctgtcgactgcagtatcggcatccaactggccttctcaggc 710 |||||||||| ||| || || ||||||||||| |||||||||| ||||| ||||| ||| Sbjct: 649 agctgcaagagccaagggcccgtcgactgcagcgtcggcatccagctggctttctctggc 708 Query: 711 accgataagcatgagtcagttctgaactcatggtatgaggtttcaaacctgcggcaatac 770 || || ||||| ||||| ||||||||||| ||||| ||||| || |||||| |||| ||| Sbjct: 709 acggacaagcacgagtcggttctgaactcgtggtacgaggtgtccaacctgaggcagtac 768 Query: 771 tccctctacgggctgtactcgaacctgaaggacaccctgagcggccagttcaacaagttc 830 |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| || Sbjct: 769 tccctctacgggctctactccaacctcaaggacaccctgagcggccagttcaacaagatc 828 Query: 831 ttctaggc--tttcggtgcagctgttgttcattctctcctgc 870 |||||||| ||| ||||| || ||||| |||||||||||| Sbjct: 829 ttctaggctgttttggtgctgccattgtttattctctcctgc 870 Score = 210 bits (106), Expect = 8e-51 Identities = 170/193 (88%) Strand = Plus / Plus Query: 190 acaccaacggggtgtacgagccgtgcagcgacgcgcggatccagcgcggggacggcttca 249 |||| ||||| || |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 188 acacgaacggcgtctacgagccgtgcagcgacgcacggatccagcgcggggacggcttca 247 Query: 250 ccttcggggtagccttcgcgggctacaacgccttcttctccggacccacccagctgtccc 309 |||||||||| | ||||||||| |||||||||||||| ||||| ||| ||||| | Sbjct: 248 ccttcggggtcgtcttcgcgggatacaacgccttcttttccggcaacacacagctctnnn 307 Query: 310 cctgcgaccgccgcctcaacctcgcttcctccgcccagctcgccgccttccgccccaagg 369 |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||| Sbjct: 308 nntgcgaccgccgcctcaacctcgctgcctccgggcagctcgccgtcttccgccccaagg 367 Query: 370 tcgacgagatctc 382 |||| |||||||| Sbjct: 368 tcgatgagatctc 380 >ref|NM_001057310.1| Oryza sativa (japonica cultivar-group) Os03g0647800 (Os03g0647800) mRNA, complete cds Length = 1143 Score = 392 bits (198), Expect = e-105 Identities = 270/294 (91%) Strand = Plus / Plus Query: 300 cagctgtccccctgcgaccgccgcctcaacctcgcttcctccgcccagctcgccgccttc 359 ||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||| |||| Sbjct: 258 cagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtcttc 317 Query: 360 cgccccaaggtcgacgagatctccctcctcaccatcaacaccaccacaggcttcaacccc 419 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 318 cgccccaaggtcgacgagatctccctcctcaccatcaacaccaccaccggcttcaacccc 377 Query: 420 gcttcagctggtgggttcatggtagcatttgctggtaggaagtatgcagccagatctgca 479 || |||||||||||| ||||||||||||||| |||||||||||||||||| | |||| Sbjct: 378 gccacagctggtgggtacatggtagcatttgccggtaggaagtatgcagcccggtctgtt 437 Query: 480 ccaatctttgtctccaattcctcatttacagtgtctagcttcacgctggttcttgaattc 539 |||| |||||| ||||||||||||| |||||| || |||||||| ||||||||||| ||| Sbjct: 438 ccaacctttgtgtccaattcctcatatacagtctccagcttcaccctggttcttgagttc 497 Query: 540 aaaaaaggcaggctccaaaacttgcactggaagaaggatggctgtggtgcttgc 593 || ||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 498 aataaaggcaggcttcaaaacttgcattggaagaaggatggctgtggtgcttgc 551 Score = 392 bits (198), Expect = e-105 Identities = 261/282 (92%) Strand = Plus / Plus Query: 612 gtttgcctcggcaagcaaacctgcgccatcagaacacaaagctgcaagacccagggacct 671 |||||| |||||||||||||||| ||| |||||||||| |||||||||| |||||||||| Sbjct: 570 gtttgcatcggcaagcaaacctgtgccttcagaacacagagctgcaagagccagggacct 629 Query: 672 gtcgactgcagtatcggcatccaactggccttctcaggcaccgataagcatgagtcagtt 731 || |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 630 gttgactgcagtatcggcatccagctggctttctcaggcaccgataaacacgaatcagtt 689 Query: 732 ctgaactcatggtatgaggtttcaaacctgcggcaatactccctctacgggctgtactcg 791 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 690 ctgaactcgtggtatgaggtgtctaacctgcggcaatactccctctacgggctgtactcg 749 Query: 792 aacctgaaggacaccctgagcggccagttcaacaagttcttctaggctttcggtgcagct 851 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 750 aacctgaaggacaccctgagcggccagttcaacaagttcttctaggcttttggtgcaccc 809 Query: 852 gttgttcattctctcctgccactacttctctggaactccctg 893 ||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 810 gttgttcatactcttctgccactatttctctggagctccctg 851 Score = 91.7 bits (46), Expect = 5e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 195 aacggggtgtacgagccgtgcagcgacgcgcggatccagcgcggggacggcttcaccttc 254 |||||||||||||| || ||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 150 aacggggtgtacgacccctgcagcgacacgcggatccagcgcggggacgggttcagcttc 209 Query: 255 ggggtagccttcgc 268 ||| | |||||||| Sbjct: 210 gggatcgccttcgc 223 >gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 392 bits (198), Expect = e-105 Identities = 261/282 (92%) Strand = Plus / Minus Query: 612 gtttgcctcggcaagcaaacctgcgccatcagaacacaaagctgcaagacccagggacct 671 |||||| |||||||||||||||| ||| |||||||||| |||||||||| |||||||||| Sbjct: 42404 gtttgcatcggcaagcaaacctgtgccttcagaacacagagctgcaagagccagggacct 42345 Query: 672 gtcgactgcagtatcggcatccaactggccttctcaggcaccgataagcatgagtcagtt 731 || |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 42344 gttgactgcagtatcggcatccagctggctttctcaggcaccgataaacacgaatcagtt 42285 Query: 732 ctgaactcatggtatgaggtttcaaacctgcggcaatactccctctacgggctgtactcg 791 |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 42284 ctgaactcgtggtatgaggtgtctaacctgcggcaatactccctctacgggctgtactcg 42225 Query: 792 aacctgaaggacaccctgagcggccagttcaacaagttcttctaggctttcggtgcagct 851 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 42224 aacctgaaggacaccctgagcggccagttcaacaagttcttctaggcttttggtgcaccc 42165 Query: 852 gttgttcattctctcctgccactacttctctggaactccctg 893 ||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 42164 gttgttcatactcttctgccactatttctctggagctccctg 42123 Score = 192 bits (97), Expect = 2e-45 Identities = 115/121 (95%) Strand = Plus / Minus Query: 300 cagctgtccccctgcgaccgccgcctcaacctcgcttcctccgcccagctcgccgccttc 359 ||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||| |||| Sbjct: 45427 cagctctccccctgcgaccgccgcctcagcctcgcctcctccggccagctcgccgtcttc 45368 Query: 360 cgccccaaggtcgacgagatctccctcctcaccatcaacaccaccacaggcttcaacccc 419 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 45367 cgccccaaggtcgacgagatctccctcctcaccatcaacaccaccaccggcttcaacccc 45308 Query: 420 g 420 | Sbjct: 45307 g 45307 Score = 115 bits (58), Expect = 4e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 424 cagctggtgggttcatggtagcatttgctggtaggaagtatgcagccagatctgcaccaa 483 |||||||||||| ||||||||||||||| |||||||||||||||||| | |||| |||| Sbjct: 42689 cagctggtgggtacatggtagcatttgccggtaggaagtatgcagcccggtctgttccaa 42630 Query: 484 tctttgtctccaattcctcatttacagtgtctagcttcacgctggt 529 |||||| ||||||||||||| |||||| || |||||||| ||||| Sbjct: 42629 cctttgtgtccaattcctcatatacagtctccagcttcaccctggt 42584 Score = 101 bits (51), Expect = 5e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 527 ggttcttgaattcaaaaaaggcaggctccaaaacttgcactggaagaaggatggctgtgg 586 ||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 42489 ggttcttgagttcaataaaggcaggcttcaaaacttgcattggaagaaggatggctgtgg 42430 Query: 587 tgcttgc 593 ||||||| Sbjct: 42429 tgcttgc 42423 Score = 91.7 bits (46), Expect = 5e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 195 aacggggtgtacgagccgtgcagcgacgcgcggatccagcgcggggacggcttcaccttc 254 |||||||||||||| || ||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 45535 aacggggtgtacgacccctgcagcgacacgcggatccagcgcggggacgggttcagcttc 45476 Query: 255 ggggtagccttcgc 268 ||| | |||||||| Sbjct: 45475 gggatcgccttcgc 45462