BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst006a17
         (487 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY107271.1| Zea mays PCO074494 mRNA sequence                       135   2e-28
dbj|AB042269.1| Zea mays ZmRR7 mRNA for response regulator 7, co...   135   2e-28
tpd|BR000311.1| TPA_inf: Oryza sativa (japonica cultivar-group) ...   103   6e-19
ref|NM_001059417.1| Oryza sativa (japonica cultivar-group) Os04g...   103   6e-19
dbj|AB249661.1| Oryza sativa (japonica cultivar-group) OsRR1 mRN...   103   6e-19

>gb|AY107271.1| Zea mays PCO074494 mRNA sequence
          Length = 499

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                       
Query: 81  ctacttccagttcctcttcaagttcatcctgctcgcgtacgcgatactgtgcctgggcga 140
           |||||||||||||||| |||||||| | ||||||||||||||| | |||||||||  |||
Sbjct: 291 ctacttccagttcctcctcaagttcgtgctgctcgcgtacgcggtgctgtgcctgaccga 350

                                                       
Query: 141 gctcctccacagatggtccaatggctgcttcctctccctgtggt 184
           |||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 351 gctcctccacagatggtccaatggctccgtcctctccctgtggt 394


>dbj|AB042269.1| Zea mays ZmRR7 mRNA for response regulator 7, complete cds
          Length = 1058

 Score =  135 bits (68), Expect = 2e-28
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                       
Query: 81  ctacttccagttcctcttcaagttcatcctgctcgcgtacgcgatactgtgcctgggcga 140
           |||||||||||||||| |||||||| | ||||||||||||||| | |||||||||  |||
Sbjct: 822 ctacttccagttcctcctcaagttcgtgctgctcgcgtacgcggtgctgtgcctgaccga 881

                                                       
Query: 141 gctcctccacagatggtccaatggctgcttcctctccctgtggt 184
           |||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 882 gctcctccacagatggtccaatggctccgtcctctccctgtggt 925


>tpd|BR000311.1| TPA_inf: Oryza sativa (japonica cultivar-group) OsRR1 gene for A-type
            response regulator, complete cds
          Length = 7000

 Score =  103 bits (52), Expect = 6e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   tacttccagttcctcttcaagttcatcctgctcgcgtacgcgatactgtgcctgggcgag 141
            |||||||  ||||||||||||||||||||||| | |||||| || ||||||||||| |||
Sbjct: 5144 tacttccctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgag 5203

                                                        
Query: 142  ctcctccacagatggtccaatggctgcttcctctccctgtggtg 185
            || || ||||||||||| || ||||||||||||  |||||||||
Sbjct: 5204 ctgctgcacagatggtcaaacggctgcttcctcaacctgtggtg 5247


>ref|NM_001059417.1| Oryza sativa (japonica cultivar-group) Os04g0442300 (Os04g0442300)
            mRNA, complete cds
          Length = 1808

 Score =  103 bits (52), Expect = 6e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   tacttccagttcctcttcaagttcatcctgctcgcgtacgcgatactgtgcctgggcgag 141
            |||||||  ||||||||||||||||||||||| | |||||| || ||||||||||| |||
Sbjct: 950  tacttccctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgag 1009

                                                        
Query: 142  ctcctccacagatggtccaatggctgcttcctctccctgtggtg 185
            || || ||||||||||| || ||||||||||||  |||||||||
Sbjct: 1010 ctgctgcacagatggtcaaacggctgcttcctcaacctgtggtg 1053


>dbj|AB249661.1| Oryza sativa (japonica cultivar-group) OsRR1 mRNA for typeA
           response regulator 1, complete cds
          Length = 696

 Score =  103 bits (52), Expect = 6e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                       
Query: 82  tacttccagttcctcttcaagttcatcctgctcgcgtacgcgatactgtgcctgggcgag 141
           |||||||  ||||||||||||||||||||||| | |||||| || ||||||||||| |||
Sbjct: 586 tacttccctttcctcttcaagttcatcctgctggtgtacgccatcctgtgcctgggtgag 645

                                                       
Query: 142 ctcctccacagatggtccaatggctgcttcctctccctgtggtg 185
           || || ||||||||||| || ||||||||||||  |||||||||
Sbjct: 646 ctgctgcacagatggtcaaacggctgcttcctcaacctgtggtg 689