BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005o06 (994 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059087.1| Oryza sativa (japonica cultivar-group) Os04g... 404 e-109 dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 404 e-109 emb|CT832558.1| Oryza sativa (indica cultivar-group) cDNA clone:... 325 2e-85 emb|CR855085.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 266 2e-67 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 266 2e-67 >ref|NM_001059087.1| Oryza sativa (japonica cultivar-group) Os04g0363700 (Os04g0363700) mRNA, partial cds Length = 1991 Score = 404 bits (204), Expect = e-109 Identities = 285/312 (91%) Strand = Plus / Plus Query: 306 ggcaattatttgtggcaaagttggacaagtgcctgtgcagaaaatattgaggaatgggca 365 ||||||||||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 914 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 973 Query: 366 tacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtaggtgc 425 ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 974 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 1033 Query: 426 tgagaacttgccaatgccagctcagtggcatcgaatagctgttcataatgagcagcttgg 485 ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1034 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 1093 Query: 486 tgcatatgctgttcaaaagttggttaagaatgctgcagtctatgttgagggtgatattga 545 ||||| ||| ||||| ||||| || |||||| |||||||||| ||||||||||||||||| Sbjct: 1094 tgcatttgccgttcagaagttagtcaagaattctgcagtctacgttgagggtgatattga 1153 Query: 546 gactagagtctacaatgacagaatcaatgatcaagtgaaaaatattcctgagatctgtgt 605 ||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1154 gaccagagtctacaatgacagaattaatgatcaagtgaaaaatataccagagatctgtgt 1213 Query: 606 gcgacgcgatgg 617 ||| || ||||| Sbjct: 1214 gcggcgtgatgg 1225 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 tacaaaaaatcgcaagcatggagctctacagtttctttttctgatgttgatgagaagaat 234 |||| ||||||||||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 690 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 749 Query: 235 gacatgggtggtgatgccgatgatgattt 263 || ||||||||||||||| |||||||| Sbjct: 750 cgcaagggtggtgatgccgaagatgattt 778 >dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C16, full insert sequence Length = 1992 Score = 404 bits (204), Expect = e-109 Identities = 285/312 (91%) Strand = Plus / Plus Query: 306 ggcaattatttgtggcaaagttggacaagtgcctgtgcagaaaatattgaggaatgggca 365 ||||||||||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 915 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 974 Query: 366 tacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtaggtgc 425 ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 975 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 1034 Query: 426 tgagaacttgccaatgccagctcagtggcatcgaatagctgttcataatgagcagcttgg 485 ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1035 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 1094 Query: 486 tgcatatgctgttcaaaagttggttaagaatgctgcagtctatgttgagggtgatattga 545 ||||| ||| ||||| ||||| || |||||| |||||||||| ||||||||||||||||| Sbjct: 1095 tgcatttgccgttcagaagttagtcaagaattctgcagtctacgttgagggtgatattga 1154 Query: 546 gactagagtctacaatgacagaatcaatgatcaagtgaaaaatattcctgagatctgtgt 605 ||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 1155 gaccagagtctacaatgacagaattaatgatcaagtgaaaaatataccagagatctgtgt 1214 Query: 606 gcgacgcgatgg 617 ||| || ||||| Sbjct: 1215 gcggcgtgatgg 1226 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 175 tacaaaaaatcgcaagcatggagctctacagtttctttttctgatgttgatgagaagaat 234 |||| ||||||||||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 691 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 750 Query: 235 gacatgggtggtgatgccgatgatgattt 263 || ||||||||||||||| |||||||| Sbjct: 751 cgcaagggtggtgatgccgaagatgattt 779 >emb|CT832558.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109I16, full insert sequence Length = 1137 Score = 325 bits (164), Expect = 2e-85 Identities = 266/300 (88%) Strand = Plus / Plus Query: 397 ggcatgtttgaccagaggacagtaggtgctgagaacttgccaatgccagctcagtggcat 456 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 449 ggcatgtttgaccagaggacagtaggtgctgaaaacttgccaatgccagctcagtggcat 508 Query: 457 cgaatagctgttcataatgagcagcttggtgcatatgctgttcaaaagttggttaagaat 516 |||||| ||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||| Sbjct: 509 cgaatatctgttcacaatgagcagcttggtgcatttgccgttcagaagttagtcaagaat 568 Query: 517 gctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaatgat 576 |||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 569 tctgcagtctacgttgagggtgatatcgagaccagagtctacaatgacagaattaatgat 628 Query: 577 caagtgaaaaatattcctgagatctgtgtgcgacgcgatggcaggattagcttgattcag 636 |||||||||||||| || |||||||||||||| || ||||| | |||| ||||| || Sbjct: 629 caagtgaaaaatataccagagatctgtgtgcggcgtgatgggaagattcagttgatgcaa 688 Query: 637 tcgggggatagtgatgtcagcaaatcattagatgaattaagggaaggactattctagttg 696 || || ||||| |||| |||||||||| || || |||||||||||| ||||||||||| Sbjct: 689 tctggtgatagcaatgttggcaaatcattggaggagttaagggaaggattattctagttg 748 Score = 131 bits (66), Expect = 6e-27 Identities = 138/162 (85%) Strand = Plus / Plus Query: 102 gatgagtacgaaattgctcaagagcttgaacctgaggaggttcttaggacagcaaagaaa 161 ||||||| ||||||||||| || | ||| | |||||||| || |||||||||||||||| Sbjct: 242 gatgagtgcgaaattgctccggaacatgagcgtgaggaggctcctaggacagcaaagaaa 301 Query: 162 ttcagttgatgtatacaaaaaatcgcaagcatggagctctacagtttctttttctgatgt 221 |||||||| | |||| ||||||||||||||||| ||| || | |||||||||||||| Sbjct: 302 ctcagttgagttttacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgt 361 Query: 222 tgatgagaagaatgacatgggtggtgatgccgatgatgattt 263 |||||||||||| || ||||||||||||||| |||||||| Sbjct: 362 cgatgagaagaatcgcaagggtggtgatgccgaagatgattt 403 >emb|CR855085.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0150M16, complete sequence Length = 80612 Score = 266 bits (134), Expect = 2e-67 Identities = 191/210 (90%) Strand = Plus / Minus Query: 306 ggcaattatttgtggcaaagttggacaagtgcctgtgcagaaaatattgaggaatgggca 365 ||||||||||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 28869 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 28810 Query: 366 tacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtaggtgc 425 ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 28809 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 28750 Query: 426 tgagaacttgccaatgccagctcagtggcatcgaatagctgttcataatgagcagcttgg 485 ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 28749 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 28690 Query: 486 tgcatatgctgttcaaaagttggttaagaa 515 ||||| ||| ||||| ||||| || ||||| Sbjct: 28689 tgcatttgccgttcagaagttagtcaagaa 28660 Score = 143 bits (72), Expect = 2e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 518 ctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaatgatc 577 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 28549 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 28490 Query: 578 aagtgaaaaatattcctgagatctgtgtgcgacgcgatgg 617 ||||||||||||| || |||||||||||||| || ||||| Sbjct: 28489 aagtgaaaaatataccagagatctgtgtgcggcgtgatgg 28450 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 175 tacaaaaaatcgcaagcatggagctctacagtttctttttctgatgttgatgagaagaat 234 |||| ||||||||||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 29093 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 29034 Query: 235 gacatgggtggtgatgccgatgatgattt 263 || ||||||||||||||| |||||||| Sbjct: 29033 cgcaagggtggtgatgccgaagatgattt 29005 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 266 bits (134), Expect = 2e-67 Identities = 191/210 (90%) Strand = Plus / Minus Query: 306 ggcaattatttgtggcaaagttggacaagtgcctgtgcagaaaatattgaggaatgggca 365 ||||||||||||||| ||||||||||||||||| || ||||||||| | || || ||||| Sbjct: 17503140 ggcaattatttgtggaaaagttggacaagtgccagtacagaaaatactaagaaacgggca 17503081 Query: 366 tacggtaactgtatttactgttgggacagggggcatgtttgaccagaggacagtaggtgc 425 ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 17503080 tacagtaactgtctttactgttggaacaggtggcatgtttgaccagaggacagtaggtgc 17503021 Query: 426 tgagaacttgccaatgccagctcagtggcatcgaatagctgttcataatgagcagcttgg 485 ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 17503020 tgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagcagcttgg 17502961 Query: 486 tgcatatgctgttcaaaagttggttaagaa 515 ||||| ||| ||||| ||||| || ||||| Sbjct: 17502960 tgcatttgccgttcagaagttagtcaagaa 17502931 Score = 143 bits (72), Expect = 2e-30 Identities = 93/100 (93%) Strand = Plus / Minus Query: 518 ctgcagtctatgttgagggtgatattgagactagagtctacaatgacagaatcaatgatc 577 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 17502820 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 17502761 Query: 578 aagtgaaaaatattcctgagatctgtgtgcgacgcgatgg 617 ||||||||||||| || |||||||||||||| || ||||| Sbjct: 17502760 aagtgaaaaatataccagagatctgtgtgcggcgtgatgg 17502721 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 175 tacaaaaaatcgcaagcatggagctctacagtttctttttctgatgttgatgagaagaat 234 |||| ||||||||||||||||| ||| || | |||||||||||||| |||||||||||| Sbjct: 17503364 tacagaaaatcgcaagcatggaactcgactgcgtctttttctgatgtcgatgagaagaat 17503305 Query: 235 gacatgggtggtgatgccgatgatgattt 263 || ||||||||||||||| |||||||| Sbjct: 17503304 cgcaagggtggtgatgccgaagatgattt 17503276