BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst005i06
         (786 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome...   151   5e-33
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...   151   5e-33
ref|NM_001062713.1| Oryza sativa (japonica cultivar-group) Os05g...   121   4e-24
dbj|AK100416.1| Oryza sativa (japonica cultivar-group) cDNA clon...   121   4e-24

>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01,
              complete sequence
          Length = 144395

 Score =  151 bits (76), Expect = 5e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                          
Query: 414    gtgtgtgatttggtgggcaggaagggaggaacaatgggaacaactcggcgtggccggtgg 473
              ||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 131973 gtgtgtgatctggtgagcaggaagggaggagcaatgggaacagctcggcgtggccggtgg 132032

                                                                          
Query: 474    cgaaccccgcactgacctgcgcgtctgtgacggaggccgggtaccccagcaactttgtcg 533
              |||||||||  |||||||||||| |   |||||| | ||||||||| |||||||| ||||
Sbjct: 132033 cgaaccccgtgctgacctgcgcgaccccgacggaaggcgggtacccgagcaacttcgtcg 132092

                                          
Query: 534    ccgacccattcctctgcgtgtaggtgag 561
              | ||||| ||||||| |||| |||||||
Sbjct: 132093 ctgacccgttcctctacgtgcaggtgag 132120


>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  151 bits (76), Expect = 5e-33
 Identities = 130/148 (87%)
 Strand = Plus / Plus

                                                                            
Query: 414      gtgtgtgatttggtgggcaggaagggaggaacaatgggaacaactcggcgtggccggtgg 473
                ||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 26618498 gtgtgtgatctggtgagcaggaagggaggagcaatgggaacagctcggcgtggccggtgg 26618557

                                                                            
Query: 474      cgaaccccgcactgacctgcgcgtctgtgacggaggccgggtaccccagcaactttgtcg 533
                |||||||||  |||||||||||| |   |||||| | ||||||||| |||||||| ||||
Sbjct: 26618558 cgaaccccgtgctgacctgcgcgaccccgacggaaggcgggtacccgagcaacttcgtcg 26618617

                                            
Query: 534      ccgacccattcctctgcgtgtaggtgag 561
                | ||||| ||||||| |||| |||||||
Sbjct: 26618618 ctgacccgttcctctacgtgcaggtgag 26618645


>ref|NM_001062713.1| Oryza sativa (japonica cultivar-group) Os05g0540000 (Os05g0540000)
           mRNA, complete cds
          Length = 2749

 Score =  121 bits (61), Expect = 4e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 ggaagggaggaacaatgggaacaactcggcgtggccggtggcgaaccccgcactgacctg 492
           ||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||
Sbjct: 572 ggaagggaggagcaatgggaacagctcggcgtggccggtggcgaaccccgtgctgacctg 631

                                                                       
Query: 493 cgcgtctgtgacggaggccgggtaccccagcaactttgtcgccgacccattcctctgcgt 552
           |||| |   |||||| | ||||||||| |||||||| ||||| ||||| ||||||| |||
Sbjct: 632 cgcgaccccgacggaaggcgggtacccgagcaacttcgtcgctgacccgttcctctacgt 691

            
Query: 553 g 553
           |
Sbjct: 692 g 692


>dbj|AK100416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M19, full
           insert sequence
          Length = 2750

 Score =  121 bits (61), Expect = 4e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                       
Query: 433 ggaagggaggaacaatgggaacaactcggcgtggccggtggcgaaccccgcactgacctg 492
           ||||||||||| ||||||||||| ||||||||||||||||||||||||||  ||||||||
Sbjct: 573 ggaagggaggagcaatgggaacagctcggcgtggccggtggcgaaccccgtgctgacctg 632

                                                                       
Query: 493 cgcgtctgtgacggaggccgggtaccccagcaactttgtcgccgacccattcctctgcgt 552
           |||| |   |||||| | ||||||||| |||||||| ||||| ||||| ||||||| |||
Sbjct: 633 cgcgaccccgacggaaggcgggtacccgagcaacttcgtcgctgacccgttcctctacgt 692

            
Query: 553 g 553
           |
Sbjct: 693 g 693