BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005h24 (623 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061966.1| Oryza sativa (japonica cultivar-group) Os05g... 268 2e-68 dbj|AK059324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68 gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31 >ref|NM_001061966.1| Oryza sativa (japonica cultivar-group) Os05g0389000 (Os05g0389000) mRNA, partial cds Length = 1237 Score = 268 bits (135), Expect = 2e-68 Identities = 339/401 (84%), Gaps = 17/401 (4%) Strand = Plus / Plus Query: 4 gtgcaaagggctccttacacattggcccctgttatgccaacaccaatgaaaagtacctgg 63 |||||||| ||||| ||||||||| || |||||| | ||| |||||||| ||||||| Sbjct: 701 gtgcaaagagctccatacacattgccctctgtta---ctgcacaaatgaaaaatacctgg 757 Query: 64 aaccctgccgatccttctgcggaccctcttttttggagcaacttcatcctgccatcgagt 123 |||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||| Sbjct: 758 aaccctgctgatccttctgcggaccctcttttctggaccaacttcatcctgccagcaagt 817 Query: 124 caacccgtcactatggcgacaataacaacaacaacaacatttgcaaagaatgaggtgagt 183 ||||| ||||| ||||| ||||| | |||||||||| ||||||||||||||||||||| Sbjct: 818 caacctgtcacgatggcaacaat---agcaacaacaacgtttgcaaagaatgaggtgagt 874 Query: 184 tcaagtgatccattccagagccaggagtgaccgtatgagtttaccaaa--gcatgcagga 241 ||||||||||||||||| | || ||||||||||| ||| |||||||| |||||||||| Sbjct: 875 tcaagtgatccattccatggtcaagagtgaccgtacgagcttaccaaagtgcatgcagga 934 Query: 242 t----attttagcttggtcgatgacaacatcctgcacttctgtgagtttccttccaccga 297 | |||| ||||||| | ||| |||||||||||| ||| || ||||||||| || | Sbjct: 935 tttgctttttggcttggtgggtgataacatcctgcacgtctatgggtttccttcttccta 994 Query: 298 gcttttgatatggtgattcgtgagc-agcactctttgtatccatacttcataggacatga 356 |||||||| ||||| ||||| | | || ||||||||||||| |||||| | ||||| Sbjct: 995 gcttttga---ggtgacccgtgaacaaataccctttgtatccatagttcataagccatga 1051 Query: 357 atagaaggtaagagaagtacaagcatagtttatgtaatata 397 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1052 atagaaggtaagagaagtacaaccatag-ttatgtaatata 1091 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 417 aatgatatttagttgtagagctgtctgtacatatcgcggttcttgttccagcta 470 |||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 1121 aatgatatttagttatagagctgtctgtacatatcgcggttcttatttcagcta 1174 >dbj|AK059324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H11, full insert sequence Length = 1236 Score = 268 bits (135), Expect = 2e-68 Identities = 339/401 (84%), Gaps = 17/401 (4%) Strand = Plus / Plus Query: 4 gtgcaaagggctccttacacattggcccctgttatgccaacaccaatgaaaagtacctgg 63 |||||||| ||||| ||||||||| || |||||| | ||| |||||||| ||||||| Sbjct: 700 gtgcaaagagctccatacacattgccctctgtta---ctgcacaaatgaaaaatacctgg 756 Query: 64 aaccctgccgatccttctgcggaccctcttttttggagcaacttcatcctgccatcgagt 123 |||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||| Sbjct: 757 aaccctgctgatccttctgcggaccctcttttctggaccaacttcatcctgccagcaagt 816 Query: 124 caacccgtcactatggcgacaataacaacaacaacaacatttgcaaagaatgaggtgagt 183 ||||| ||||| ||||| ||||| | |||||||||| ||||||||||||||||||||| Sbjct: 817 caacctgtcacgatggcaacaat---agcaacaacaacgtttgcaaagaatgaggtgagt 873 Query: 184 tcaagtgatccattccagagccaggagtgaccgtatgagtttaccaaa--gcatgcagga 241 ||||||||||||||||| | || ||||||||||| ||| |||||||| |||||||||| Sbjct: 874 tcaagtgatccattccatggtcaagagtgaccgtacgagcttaccaaagtgcatgcagga 933 Query: 242 t----attttagcttggtcgatgacaacatcctgcacttctgtgagtttccttccaccga 297 | |||| ||||||| | ||| |||||||||||| ||| || ||||||||| || | Sbjct: 934 tttgctttttggcttggtgggtgataacatcctgcacgtctatgggtttccttcttccta 993 Query: 298 gcttttgatatggtgattcgtgagc-agcactctttgtatccatacttcataggacatga 356 |||||||| ||||| ||||| | | || ||||||||||||| |||||| | ||||| Sbjct: 994 gcttttga---ggtgacccgtgaacaaataccctttgtatccatagttcataagccatga 1050 Query: 357 atagaaggtaagagaagtacaagcatagtttatgtaatata 397 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1051 atagaaggtaagagaagtacaaccatag-ttatgtaatata 1090 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 417 aatgatatttagttgtagagctgtctgtacatatcgcggttcttgttccagcta 470 |||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 1120 aatgatatttagttatagagctgtctgtacatatcgcggttcttatttcagcta 1173 >gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 145 bits (73), Expect = 2e-31 Identities = 135/155 (87%), Gaps = 3/155 (1%) Strand = Plus / Plus Query: 4 gtgcaaagggctccttacacattggcccctgttatgccaacaccaatgaaaagtacctgg 63 |||||||| ||||| ||||||||| || |||||| | ||| |||||||| ||||||| Sbjct: 145197 gtgcaaagagctccatacacattgccctctgtta---ctgcacaaatgaaaaatacctgg 145253 Query: 64 aaccctgccgatccttctgcggaccctcttttttggagcaacttcatcctgccatcgagt 123 |||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||| Sbjct: 145254 aaccctgctgatccttctgcggaccctcttttctggaccaacttcatcctgccagcaagt 145313 Query: 124 caacccgtcactatggcgacaataacaacaacaac 158 ||||| ||||| ||||| |||||| |||||||||| Sbjct: 145314 caacctgtcacgatggcaacaatagcaacaacaac 145348 Score = 93.7 bits (47), Expect = 8e-16 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 163 tttgcaaagaatgaggtgagttcaagtgatccattccagagccaggagtgaccgtatgag 222 |||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||| Sbjct: 145448 tttgcaaagaatgaggtgagttcaagtgatccattccatggtcaagagtgaccgtacgag 145507 Query: 223 tttaccaaa--gcatgcaggat 242 |||||||| ||||||||||| Sbjct: 145508 cttaccaaagtgcatgcaggat 145529 Score = 89.7 bits (45), Expect = 1e-14 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 329 ctttgtatccatacttcataggacatgaatagaaggtaagagaagtacaagcatagttta 388 ||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||| ||| Sbjct: 146341 ctttgtatccatagttcataagccatgaatagaaggtaagagaagtacaaccatag-tta 146399 Query: 389 tgtaatata 397 ||||||||| Sbjct: 146400 tgtaatata 146408 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 417 aatgatatttagttgtagagctgtctgtacatatcgcggttcttgttccagcta 470 |||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 146438 aatgatatttagttatagagctgtctgtacatatcgcggttcttatttcagcta 146491 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 145 bits (73), Expect = 2e-31 Identities = 135/155 (87%), Gaps = 3/155 (1%) Strand = Plus / Plus Query: 4 gtgcaaagggctccttacacattggcccctgttatgccaacaccaatgaaaagtacctgg 63 |||||||| ||||| ||||||||| || |||||| | ||| |||||||| ||||||| Sbjct: 18672082 gtgcaaagagctccatacacattgccctctgtta---ctgcacaaatgaaaaatacctgg 18672138 Query: 64 aaccctgccgatccttctgcggaccctcttttttggagcaacttcatcctgccatcgagt 123 |||||||| ||||||||||||||||||||||| |||| |||||||||||||||| | ||| Sbjct: 18672139 aaccctgctgatccttctgcggaccctcttttctggaccaacttcatcctgccagcaagt 18672198 Query: 124 caacccgtcactatggcgacaataacaacaacaac 158 ||||| ||||| ||||| |||||| |||||||||| Sbjct: 18672199 caacctgtcacgatggcaacaatagcaacaacaac 18672233 Score = 93.7 bits (47), Expect = 8e-16 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 163 tttgcaaagaatgaggtgagttcaagtgatccattccagagccaggagtgaccgtatgag 222 |||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||| Sbjct: 18672333 tttgcaaagaatgaggtgagttcaagtgatccattccatggtcaagagtgaccgtacgag 18672392 Query: 223 tttaccaaa--gcatgcaggat 242 |||||||| ||||||||||| Sbjct: 18672393 cttaccaaagtgcatgcaggat 18672414 Score = 89.7 bits (45), Expect = 1e-14 Identities = 64/69 (92%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 329 ctttgtatccatacttcataggacatgaatagaaggtaagagaagtacaagcatagttta 388 ||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||| ||| Sbjct: 18673226 ctttgtatccatagttcataagccatgaatagaaggtaagagaagtacaaccatag-tta 18673284 Query: 389 tgtaatata 397 ||||||||| Sbjct: 18673285 tgtaatata 18673293 Score = 83.8 bits (42), Expect = 8e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 417 aatgatatttagttgtagagctgtctgtacatatcgcggttcttgttccagcta 470 |||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 18673323 aatgatatttagttatagagctgtctgtacatatcgcggttcttatttcagcta 18673376