BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005g05 (592 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245642.1| Zea mays clone 18641 mRNA sequence 472 e-130 emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger pr... 438 e-119 emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribos... 416 e-113 emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribos... 367 3e-98 emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:... 359 8e-96 >gb|DQ245642.1| Zea mays clone 18641 mRNA sequence Length = 647 Score = 472 bits (238), Expect = e-130 Identities = 289/306 (94%) Strand = Plus / Plus Query: 39 ggagaccagagagcgcggaacccgaccgaaccatagcctcccaccatggtgctgcagaac 98 |||||||||||||||||| ||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 50 ggagaccagagagcgcggttcccgagcaaaccctagcctcccacgatggtgctgcagaac 109 Query: 99 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 169 Query: 159 ctcgtccagtcccccaactccttcttcatggacgtcaagtgccagggctgcttcaacatc 218 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ctcgtccagtcccccaattccttcttcatggacgtcaagtgccagggctgcttcaacatc 229 Query: 219 actactgtgttcagccactcccagaccgtggtggtgtgcgcaggctgccaaaccgtgctc 278 |||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||| Sbjct: 230 actactgtgttcagccactcacagactgttgtggtgtgcccaggctgccaaacagtgctc 289 Query: 279 tgccagcctacgggtggaaaggcgaggctgaccgagggatgctccttccgccgcaagggc 338 |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 290 tgccagccaacgggtggtaaggccaggctcaccgagggttgctccttccgccgcaagggc 349 Query: 339 gactaa 344 |||||| Sbjct: 350 gactaa 355 >emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger protein Length = 493 Score = 438 bits (221), Expect = e-119 Identities = 260/273 (95%) Strand = Plus / Plus Query: 72 tagcctcccaccatggtgctgcagaacgacatcgacctgctgaacccgccggcggagctc 131 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 tagcctcccacgatggtgctgcagaacgacatcgacctgctgaacccgccggcggagctc 82 Query: 132 gagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggac 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 gagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggac 142 Query: 192 gtcaagtgccagggctgcttcaacatcactactgtgttcagccactcccagaccgtggtg 251 |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 143 gtcaagtgccagggctgcttcaacatcactactgtgttcagccattcccagactgttgtg 202 Query: 252 gtgtgcgcaggctgccaaaccgtgctctgccagcctacgggtggaaaggcgaggctgacc 311 |||||| |||||||||| || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 203 gtgtgcccaggctgccagacggtgctctgccagccaacgggtggcaaggccaggctaacc 262 Query: 312 gagggatgctccttccgccgcaagggcgactaa 344 ||||| ||||||||||| ||||||||||||||| Sbjct: 263 gagggttgctccttccgtcgcaagggcgactaa 295 >emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27A gene) Length = 596 Score = 416 bits (210), Expect = e-113 Identities = 261/278 (93%) Strand = Plus / Plus Query: 67 aaccatagcctcccaccatggtgctgcagaacgacatcgacctgctgaacccgccggcgg 126 |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 50 aaccctagcctcccacgatggtgctgcagaacgacatcgacctgctcaacccgccggccg 109 Query: 127 agctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttca 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110 agctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactctttcttca 169 Query: 187 tggacgtcaagtgccagggctgcttcaacatcactactgtgttcagccactcccagaccg 246 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 170 tggacgtcaagtgccagggttgcttcaacatcactactgtgttcagccactcccagactg 229 Query: 247 tggtggtgtgcgcaggctgccaaaccgtgctctgccagcctacgggtggaaaggcgaggc 306 | ||||||||| ||||||||||||| |||||||||||||| || ||||| ||||| |||| Sbjct: 230 tcgtggtgtgcccaggctgccaaacagtgctctgccagccaaccggtggcaaggccaggc 289 Query: 307 tgaccgagggatgctccttccgccgcaagggcgactaa 344 | || ||||| ||||||||||||||||||||||||||| Sbjct: 290 taactgagggctgctccttccgccgcaagggcgactaa 327 >emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27C gene) Length = 521 Score = 367 bits (185), Expect = 3e-98 Identities = 242/261 (92%) Strand = Plus / Plus Query: 84 atggtgctgcagaacgacatcgacctgctgaacccgccggcggagctcgagaagctcaag 143 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 86 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 145 Query: 144 cacaagaagaagcgcctcgtccagtcccccaactccttcttcatggacgtcaagtgccag 203 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 146 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 205 Query: 204 ggctgcttcaacatcactactgtgttcagccactcccagaccgtggtggtgtgcgcaggc 263 |||||||||||||| || ||||||||||||||||| |||||||||||||||||| | ||| Sbjct: 206 ggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggc 265 Query: 264 tgccaaaccgtgctctgccagcctacgggtggaaaggcgaggctgaccgagggatgctcc 323 ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||||||| Sbjct: 266 tgccagacggtgctctgccaacccaccggtggaaaggcgaggctcaccgagggatgctcc 325 Query: 324 ttccgccgcaagggcgactaa 344 |||||||| ||||| |||||| Sbjct: 326 ttccgccggaagggtgactaa 346 >emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030C13, full insert sequence Length = 467 Score = 359 bits (181), Expect = 8e-96 Identities = 232/249 (93%) Strand = Plus / Plus Query: 95 gaacgacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaa 154 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 97 gaacgacatcgacctgctgaacccgccggcggagctggagaagctcaagcacaagaagaa 156 Query: 155 gcgcctcgtccagtcccccaactccttcttcatggacgtcaagtgccagggctgcttcaa 214 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 157 gcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgccagggctgcttcaa 216 Query: 215 catcactactgtgttcagccactcccagaccgtggtggtgtgcgcaggctgccaaaccgt 274 ||| || ||||| ||||||||||||||||||||||| |||||| | |||||||| ||||| Sbjct: 217 cataacgactgtattcagccactcccagaccgtggttgtgtgcccgggctgccagaccgt 276 Query: 275 gctctgccagcctacgggtggaaaggcgaggctgaccgagggatgctccttccgccgcaa 334 ||||||||||||||| ||||| ||||| ||||| || ||||| |||||||||||||| || Sbjct: 277 gctctgccagcctactggtgggaaggccaggctcacggagggctgctccttccgccggaa 336 Query: 335 gggcgacta 343 | ||||||| Sbjct: 337 gagcgacta 345