BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005d12 (1089 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK242112.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 454 e-124 ref|NM_001065104.1| Oryza sativa (japonica cultivar-group) Os06g... 387 e-104 gb|AY108980.1| Zea mays PCO137929 mRNA sequence 168 3e-38 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 >dbj|AK242112.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075146C02, full insert sequence Length = 1044 Score = 454 bits (229), Expect = e-124 Identities = 503/593 (84%), Gaps = 1/593 (0%) Strand = Plus / Plus Query: 168 ggtgaaggggaggtcctgcaagggctgcctcttctactcgtcggtgctcaggtcgcgagc 227 ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 209 ggtgaaggggaagtcctgcaagggctacctcttctactcgtcgtcgctcaggtcgcgaga 268 Query: 228 ccgcggccccgtctgcgtcggcgtcacccgcgccataccccaagttcctgaccgcatggt 287 |||||| |||||||||| |||| ||||||||||||| |||||||| ||||| | |||||| Sbjct: 269 ccgcggtcccgtctgcgccggcatcacccgcgccatcccccaagtccctgatcacatggt 328 Query: 288 cggagaaattgagctggaagctatccaagaaggccgcaacctttccgacttcaaatatgc 347 |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 329 tggagaaattgagatggaagctatccaggaaggtcgcaacctttccgacttcagatatgg 388 Query: 348 atgtgttggctattccatatacctagacgacaaggataattctacggggaaaggagataa 407 |||| | ||||||||||| || || || |||||| | | |||| |||||||| || || Sbjct: 389 atgtatcggctattccatgtatctggatgacaagaagagttctgaagggaaaggtgacaa 448 Query: 408 gcaggcacagttgcctatttgtgttggagttgagctattggcagatagtagagcctcaac 467 ||| | || ||||||||||||||||| | ||||||||||| ||||| | | | || || Sbjct: 449 gcacccgcaactgcctatttgtgttggaatcgagctattggctgatagaaaaacttcgac 508 Query: 468 taaacaagcaccagctcaccttaaaaaagaagctcctcaaccacgtcgatacaaacctgg 527 ||| || || || |||||| |||||| |||||||| |||||||| ||||| || |||| Sbjct: 509 taatcaggcttcatctcaccataaaaaggaagctccccaaccacggcgatataagcctgc 568 Query: 528 acatggaggagaggatttcttaaccaaatttcagaggaatgctgggcttgtgggcaatgg 587 ||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 569 acagagaggagatgatttcttaaccaaatttcagaggaatgctggacttgtggctaatgg 628 Query: 588 agtggctaggaacctgaataaagttgggacctacatcaaagacactgtgggtgatatcat 647 || || |||||| | |||||||||||| ||||||| |||||||| ||| ||||||||| Sbjct: 629 tgtagcaaggaacttaaataaagttggggcctacattaaagacaccatggatgatatcat 688 Query: 648 gttcccttaccgcaagcctcccaagtaaatcctagcactggttctctttaaatcatggag 707 || ||||||||||| | ||| ||||||| ||||| |||||||| ||| |||| || || Sbjct: 689 gtatccttaccgcaaacgtccaaagtaaaacctagatctggttcttttttaatcctgaag 748 Query: 708 tggagtagacaaac-ggggagcgtctaatccattacttcctgaaacacctggc 759 |||||||||||| |||||| |||||||||| |||||||||||||||||||| Sbjct: 749 aagagtagacaaacgggggagtgtctaatccactacttcctgaaacacctggc 801 >ref|NM_001065104.1| Oryza sativa (japonica cultivar-group) Os06g0713900 (Os06g0713900) mRNA, complete cds Length = 849 Score = 387 bits (195), Expect = e-104 Identities = 420/495 (84%) Strand = Plus / Plus Query: 168 ggtgaaggggaggtcctgcaagggctgcctcttctactcgtcggtgctcaggtcgcgagc 227 ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 102 ggtgaaggggaagtcctgcaagggctacctcttctactcgtcgtcgctcaggtcgcgaga 161 Query: 228 ccgcggccccgtctgcgtcggcgtcacccgcgccataccccaagttcctgaccgcatggt 287 |||||| |||||||||| |||| ||||||||||||| |||||||| ||||| | |||||| Sbjct: 162 ccgcggtcccgtctgcgccggcatcacccgcgccatcccccaagtccctgatcacatggt 221 Query: 288 cggagaaattgagctggaagctatccaagaaggccgcaacctttccgacttcaaatatgc 347 |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||| Sbjct: 222 tggagaaattgagatggaagctatccaggaaggtcgcaacctttccgacttcagatatgg 281 Query: 348 atgtgttggctattccatatacctagacgacaaggataattctacggggaaaggagataa 407 |||| | ||||||||||| || || || |||||| | | |||| |||||||| || || Sbjct: 282 atgtatcggctattccatgtatctggatgacaagaagagttctgaagggaaaggtgacaa 341 Query: 408 gcaggcacagttgcctatttgtgttggagttgagctattggcagatagtagagcctcaac 467 ||| | || ||||||||||||||||| | ||||||||||| ||||| | | | || || Sbjct: 342 gcacccgcaactgcctatttgtgttggaatcgagctattggctgatagaaaaacttcgac 401 Query: 468 taaacaagcaccagctcaccttaaaaaagaagctcctcaaccacgtcgatacaaacctgg 527 ||| || || || |||||| |||||| |||||||| |||||||| ||||| || |||| Sbjct: 402 taatcaggcttcatctcaccataaaaaggaagctccccaaccacggcgatataagcctgc 461 Query: 528 acatggaggagaggatttcttaaccaaatttcagaggaatgctgggcttgtgggcaatgg 587 ||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 462 acagagaggagatgatttcttaaccaaatttcagaggaatgctggacttgtggctaatgg 521 Query: 588 agtggctaggaacctgaataaagttgggacctacatcaaagacactgtgggtgatatcat 647 || || |||||| | |||||||||||| ||||||| |||||||| ||| ||||||||| Sbjct: 522 tgtagcaaggaacttaaataaagttggggcctacattaaagacaccatggatgatatcat 581 Query: 648 gttcccttaccgcaa 662 || ||||||||||| Sbjct: 582 gtatccttaccgcaa 596 >gb|AY108980.1| Zea mays PCO137929 mRNA sequence Length = 555 Score = 168 bits (85), Expect = 3e-38 Identities = 163/189 (86%) Strand = Plus / Plus Query: 488 ttaaaaaagaagctcctcaaccacgtcgatacaaacctggacatggaggagaggatttct 547 |||| ||||||||||| ||||||||| ||| ||||| || |||| |||||| ||||||| Sbjct: 84 ttaagaaagaagctccaaaaccacgtcaatataaaccagggcatgcaggagatgatttct 143 Query: 548 taaccaaatttcagaggaatgctgggcttgtgggcaatggagtggctaggaacctgaata 607 |||| ||||||||||||||||| || ||||||| || ||| ||||||| ||||||||||| Sbjct: 144 taacgaaatttcagaggaatgcaggtcttgtggccagtggtgtggctaagaacctgaata 203 Query: 608 aagttgggacctacatcaaagacactgtgggtgatatcatgttcccttaccgcaagcctc 667 ||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||| || Sbjct: 204 gagttgggacctacatcaaagacactgtcagtgatatgatgcagcctcaccgcaagcgtc 263 Query: 668 ccaagtaaa 676 |||| |||| Sbjct: 264 ccaaataaa 272 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 163 bits (82), Expect = 2e-36 Identities = 176/206 (85%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 555 atttcagaggaatgctgggcttgtgggcaatggagtggctaggaacctgaataaagttgg 614 |||||||||||||||||| ||||||| ||||| || || |||||| | ||||||||||| Sbjct: 29754525 atttcagaggaatgctggacttgtggctaatggtgtagcaaggaacttaaataaagttgg 29754466 Query: 615 gacctacatcaaagacactgtgggtgatatcatgttcccttaccgcaagcctcccaagta 674 | ||||||| |||||||| ||| ||||||||||| ||||||||||| | ||| ||||| Sbjct: 29754465 ggcctacattaaagacaccatggatgatatcatgtatccttaccgcaaacgtccaaagta 29754406 Query: 675 aatcctagcactggttctctttaaatcatggagtggagtagacaaac-ggggagcgtcta 733 || ||||| |||||||| ||| |||| || || |||||||||||| |||||| ||||| Sbjct: 29754405 aaacctagatctggttcttttttaatcctgaagaagagtagacaaacgggggagtgtcta 29754346 Query: 734 atccattacttcctgaaacacctggc 759 ||||| |||||||||||||||||||| Sbjct: 29754345 atccactacttcctgaaacacctggc 29754320 Score = 135 bits (68), Expect = 4e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 168 ggtgaaggggaggtcctgcaagggctgcctcttctactcgtcggtgctcaggtcgcgagc 227 ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 29756679 ggtgaaggggaagtcctgcaagggctacctcttctactcgtcgtcgctcaggtcgcgaga 29756620 Query: 228 ccgcggccccgtctgcgtcggcgtcacccgcgccataccccaag 271 |||||| |||||||||| |||| ||||||||||||| ||||||| Sbjct: 29756619 ccgcggtcccgtctgcgccggcatcacccgcgccatcccccaag 29756576 Score = 107 bits (54), Expect = 9e-20 Identities = 129/154 (83%) Strand = Plus / Minus Query: 282 catggtcggagaaattgagctggaagctatccaagaaggccgcaacctttccgacttcaa 341 |||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 29755978 catggttggagaaattgagatggaagctatccaggaaggtcgcaacctttccgacttcag 29755919 Query: 342 atatgcatgtgttggctattccatatacctagacgacaaggataattctacggggaaagg 401 ||||| |||| | ||||||||||| || || || |||||| | | |||| |||||||| Sbjct: 29755918 atatggatgtatcggctattccatgtatctggatgacaagaagagttctgaagggaaagg 29755859 Query: 402 agataagcaggcacagttgcctatttgtgttgga 435 || ||||| | || ||||||||||||||||| Sbjct: 29755858 tgacaagcacccgcaactgcctatttgtgttgga 29755825 >dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 163 bits (82), Expect = 2e-36 Identities = 176/206 (85%), Gaps = 1/206 (0%) Strand = Plus / Minus Query: 555 atttcagaggaatgctgggcttgtgggcaatggagtggctaggaacctgaataaagttgg 614 |||||||||||||||||| ||||||| ||||| || || |||||| | ||||||||||| Sbjct: 52655 atttcagaggaatgctggacttgtggctaatggtgtagcaaggaacttaaataaagttgg 52596 Query: 615 gacctacatcaaagacactgtgggtgatatcatgttcccttaccgcaagcctcccaagta 674 | ||||||| |||||||| ||| ||||||||||| ||||||||||| | ||| ||||| Sbjct: 52595 ggcctacattaaagacaccatggatgatatcatgtatccttaccgcaaacgtccaaagta 52536 Query: 675 aatcctagcactggttctctttaaatcatggagtggagtagacaaac-ggggagcgtcta 733 || ||||| |||||||| ||| |||| || || |||||||||||| |||||| ||||| Sbjct: 52535 aaacctagatctggttcttttttaatcctgaagaagagtagacaaacgggggagtgtcta 52476 Query: 734 atccattacttcctgaaacacctggc 759 ||||| |||||||||||||||||||| Sbjct: 52475 atccactacttcctgaaacacctggc 52450 Score = 135 bits (68), Expect = 4e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 168 ggtgaaggggaggtcctgcaagggctgcctcttctactcgtcggtgctcaggtcgcgagc 227 ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 54809 ggtgaaggggaagtcctgcaagggctacctcttctactcgtcgtcgctcaggtcgcgaga 54750 Query: 228 ccgcggccccgtctgcgtcggcgtcacccgcgccataccccaag 271 |||||| |||||||||| |||| ||||||||||||| ||||||| Sbjct: 54749 ccgcggtcccgtctgcgccggcatcacccgcgccatcccccaag 54706 Score = 107 bits (54), Expect = 9e-20 Identities = 129/154 (83%) Strand = Plus / Minus Query: 282 catggtcggagaaattgagctggaagctatccaagaaggccgcaacctttccgacttcaa 341 |||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 54108 catggttggagaaattgagatggaagctatccaggaaggtcgcaacctttccgacttcag 54049 Query: 342 atatgcatgtgttggctattccatatacctagacgacaaggataattctacggggaaagg 401 ||||| |||| | ||||||||||| || || || |||||| | | |||| |||||||| Sbjct: 54048 atatggatgtatcggctattccatgtatctggatgacaagaagagttctgaagggaaagg 53989 Query: 402 agataagcaggcacagttgcctatttgtgttgga 435 || ||||| | || ||||||||||||||||| Sbjct: 53988 tgacaagcacccgcaactgcctatttgtgttgga 53955