BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005c07 (787 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ244511.1| Zea mays clone 8695 mRNA sequence 272 2e-69 gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rp... 266 1e-67 ref|NM_001065764.1| Oryza sativa (japonica cultivar-group) Os07g... 240 7e-60 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 240 7e-60 dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic D... 240 7e-60 >gb|DQ244511.1| Zea mays clone 8695 mRNA sequence Length = 779 Score = 272 bits (137), Expect = 2e-69 Identities = 215/241 (89%) Strand = Plus / Plus Query: 226 ccggctcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 285 |||| |||||| ||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 165 ccggttcttggtgagccgatggacttgatgactgctctacagcttgtcatgaagaagtca 224 Query: 286 agtgctcatgatggccttgtcaaggggctccgtgaggctgtgaaagcaattgagaagcat 345 |||||||||||||||||||| ||||||||||||||||||| || | |||||||||||| Sbjct: 225 agtgctcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcat 284 Query: 346 gctgcccagctatgtgtgcttgcggaggattgcgaccagcctgattacgtgaaactggtc 405 ||||| ||||| |||||||| || |||||||| |||||||||||||||||||| || || Sbjct: 285 gctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagctcgtt 344 Query: 406 aaggcactctgtgctgagcacaatgtccacttggtcactgtgcctagtgcaaaaactctt 465 |||||||| || |||||||||||||| ||| |||| |||||||| ||||| ||||||||| Sbjct: 345 aaggcactatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactctt 404 Query: 466 g 466 | Sbjct: 405 g 405 Score = 141 bits (71), Expect = 5e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 466 gctttgcaaaattgactctgagggtaaggcaaggaaggtggtgggcagctcatgtgttgt 525 ||||||||| |||||||||||||| |||||||||||||| |||||| |||| || ||||| Sbjct: 419 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcttgcgttgt 478 Query: 526 tgtgaaggactatggtgaagaatcggagggtctaaacatagtgcaggaatatgtcaagtc 585 ||| |||||||||||||||||||| ||||| || ||||| |||||||| || |||||||| Sbjct: 479 tgtcaaggactatggtgaagaatccgagggccttaacatcgtgcaggagtacgtcaagtc 538 Query: 586 acactag 592 |||||| Sbjct: 539 tcactag 545 >gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 266 bits (134), Expect = 1e-67 Identities = 209/234 (89%) Strand = Plus / Plus Query: 231 tcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtcaagtgc 290 |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 155 tcttggtgagccaatggacttgatgactgctctacagcttgtcatgaagaagtcaagtgc 214 Query: 291 tcatgatggccttgtcaaggggctccgtgaggctgtgaaagcaattgagaagcatgctgc 350 ||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||| Sbjct: 215 tcatgatggccttgtgaaggggctccgtgaggctgccaagtccattgagaagcatgctgc 274 Query: 351 ccagctatgtgtgcttgcggaggattgcgaccagcctgattacgtgaaactggtcaaggc 410 ||||| |||||||| || |||||||| |||||||||||||||||||| || || ||||| Sbjct: 275 tcagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggc 334 Query: 411 actctgtgctgagcacaatgtccacttggtcactgtgcctagtgcaaaaactct 464 ||| || |||||||||||||| ||| |||| |||||||| ||||| |||||||| Sbjct: 335 actatgcgctgagcacaatgttcacctggttactgtgccaagtgctaaaactct 388 Score = 103 bits (52), Expect = 1e-18 Identities = 103/120 (85%) Strand = Plus / Plus Query: 466 gctttgcaaaattgactctgagggtaaggcaaggaaggtggtgggcagctcatgtgttgt 525 ||||||||| || ||| ||||||| |||||||||||||| || ||| |||| || |||| Sbjct: 404 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 463 Query: 526 tgtgaaggactatggtgaagaatcggagggtctaaacatagtgcaggaatatgtcaagtc 585 ||| |||||||||||||||||||| ||||| || ||||| |||||| | ||||||||||| Sbjct: 464 tgtcaaggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 523 >ref|NM_001065764.1| Oryza sativa (japonica cultivar-group) Os07g0229900 (Os07g0229900) mRNA, complete cds Length = 753 Score = 240 bits (121), Expect = 7e-60 Identities = 211/241 (87%) Strand = Plus / Plus Query: 226 ccggctcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 285 |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 152 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 211 Query: 286 agtgctcatgatggccttgtcaaggggctccgtgaggctgtgaaagcaattgagaagcat 345 || ||||||||||| || || ||||||||||||||||| | || || |||||||||||| Sbjct: 212 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 271 Query: 346 gctgcccagctatgtgtgcttgcggaggattgcgaccagcctgattacgtgaaactggtc 405 || || ||||| || |||||||| ||||| || |||||||||||||| || || ||||| Sbjct: 272 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 331 Query: 406 aaggcactctgtgctgagcacaatgtccacttggtcactgtgcctagtgcaaaaactctt 465 ||||||||||| |||||||||||||| ||| | || || ||||||||||| ||||||||| Sbjct: 332 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 391 Query: 466 g 466 | Sbjct: 392 g 392 Score = 93.7 bits (47), Expect = 1e-15 Identities = 107/127 (84%) Strand = Plus / Plus Query: 466 gctttgcaaaattgactctgagggtaaggcaaggaaggtggtgggcagctcatgtgttgt 525 ||||||||| ||||| |||||||| ||||| |||||||| || ||| |||| || || || Sbjct: 406 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 465 Query: 526 tgtgaaggactatggtgaagaatcggagggtctaaacatagtgcaggaatatgtcaagtc 585 ||| ||||||| |||||||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 466 tgtcaaggacttcggtgaagagtcagagggcctcaacatagtccaggactatgtcaagtc 525 Query: 586 acactag 592 |||||| Sbjct: 526 ccactag 532 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 240 bits (121), Expect = 7e-60 Identities = 211/241 (87%) Strand = Plus / Minus Query: 226 ccggctcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 285 |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7266262 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 7266203 Query: 286 agtgctcatgatggccttgtcaaggggctccgtgaggctgtgaaagcaattgagaagcat 345 || ||||||||||| || || ||||||||||||||||| | || || |||||||||||| Sbjct: 7266202 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 7266143 Query: 346 gctgcccagctatgtgtgcttgcggaggattgcgaccagcctgattacgtgaaactggtc 405 || || ||||| || |||||||| ||||| || |||||||||||||| || || ||||| Sbjct: 7266142 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 7266083 Query: 406 aaggcactctgtgctgagcacaatgtccacttggtcactgtgcctagtgcaaaaactctt 465 ||||||||||| |||||||||||||| ||| | || || ||||||||||| ||||||||| Sbjct: 7266082 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 7266023 Query: 466 g 466 | Sbjct: 7266022 g 7266022 Score = 226 bits (114), Expect = 1e-55 Identities = 233/272 (85%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 198 ggaggataccccagttgaggc---agccgctccggctcttggagagcccatggacttgat 254 |||||| |||||||||||| | ||| || |||| |||||| ||||||||||| |||| Sbjct: 2647113 ggaggagaccccagttgagactccagctgccccggttcttggggagcccatggatctgat 2647172 Query: 255 gactgctctgcagcttgtgatgaagaagtcaagtgctcatgatggccttgtcaaggggct 314 ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 2647173 gactgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtct 2647232 Query: 315 ccgtgaggctgtgaaagcaattgagaagcatgctgcccagctatgtgtgcttgcggagga 374 ||||||||||| || || || |||||||||||||| ||||| ||||||||||| ||||| Sbjct: 2647233 ccgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgagga 2647292 Query: 375 ttgcgaccagcctgattacgtgaaactggtcaaggcactctgtgctgagcacaatgtcca 434 |||||||| |||||||| || || |||| ||||| || |||||||||||||| || || Sbjct: 2647293 ctgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttca 2647352 Query: 435 cttggtcactgtgcctagtgcaaaaactcttg 466 | | || || ||||||||||| || ||||||| Sbjct: 2647353 ccttgttaccgtgcctagtgctaagactcttg 2647384 >dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 240 bits (121), Expect = 7e-60 Identities = 211/241 (87%) Strand = Plus / Minus Query: 226 ccggctcttggagagcccatggacttgatgactgctctgcagcttgtgatgaagaagtca 285 |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106746 ccggttcttggagagccgatggacctgatgactgctctgcagcttgtgatgaagaagtca 106687 Query: 286 agtgctcatgatggccttgtcaaggggctccgtgaggctgtgaaagcaattgagaagcat 345 || ||||||||||| || || ||||||||||||||||| | || || |||||||||||| Sbjct: 106686 agcgctcatgatgggctcgtgaaggggctccgtgaggcggccaaggccattgagaagcat 106627 Query: 346 gctgcccagctatgtgtgcttgcggaggattgcgaccagcctgattacgtgaaactggtc 405 || || ||||| || |||||||| ||||| || |||||||||||||| || || ||||| Sbjct: 106626 gccgctcagctttgcgtgcttgctgaggactgtgaccagcctgattatgtcaagttggtc 106567 Query: 406 aaggcactctgtgctgagcacaatgtccacttggtcactgtgcctagtgcaaaaactctt 465 ||||||||||| |||||||||||||| ||| | || || ||||||||||| ||||||||| Sbjct: 106566 aaggcactctgcgctgagcacaatgttcacctcgttaccgtgcctagtgctaaaactctt 106507 Query: 466 g 466 | Sbjct: 106506 g 106506