BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst005a23 (972 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001053589.1| Oryza sativa (japonica cultivar-group) Os02g... 632 e-178 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 632 e-178 dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic D... 632 e-178 dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic D... 632 e-178 dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clon... 632 e-178 >ref|NM_001053589.1| Oryza sativa (japonica cultivar-group) Os02g0538700 (Os02g0538700) mRNA, complete cds Length = 1076 Score = 632 bits (319), Expect = e-178 Identities = 487/543 (89%) Strand = Plus / Plus Query: 78 gccatgggcaaggagaagcaccacaagcgcgagcaccacctccgccgctgctgcggctgc 137 |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 142 gccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcggg 201 Query: 138 tttgcgtcctgcctcctggccctggtcctcatcgtcgccttcgtcgcgctcgtcgtctac 197 | ||| | ||| ||||||| ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 202 atggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctac 261 Query: 198 ctcgcgctccgcccctccaagccctccttctacctgcaggacctgcagctccactccatc 257 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| || Sbjct: 262 ctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtc 321 Query: 258 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 381 Query: 318 aacgacaacgtcggcatctactacaggcgcctcgatgtcttcgtcacctaccgcgacgag 377 || ||| |||||||| || ||||| | |||||||| ||||||||||||||||||||||| Sbjct: 382 aatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaa 441 Query: 378 cccgtcaccgtgccgatctccctgccgcccatgtaccagggccaccgggacgtcaccatc 437 |||||||| ||||| ||||||| ||||| | |||||||||||||| |||||||||||| Sbjct: 442 cccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatc 501 Query: 438 tggtcgcccgtgctgtccggggagtccgtgcccgtcgccggctacgtcgccgaatgcttg 497 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||| | Sbjct: 502 tggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctc 561 Query: 498 aagcaggacatcgccgcggggtacgtcatgctgcaggtcaaggtcgacggccgcgtcaag 557 | ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 562 aggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaag 621 Query: 558 tggaaggtcggcagctgggaatccggcagctaccacctcttcgtcagctgccccgccatg 617 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 622 tggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatg 681 Query: 618 ctc 620 ||| Sbjct: 682 ctc 684 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 632 bits (319), Expect = e-178 Identities = 487/543 (89%) Strand = Plus / Minus Query: 78 gccatgggcaaggagaagcaccacaagcgcgagcaccacctccgccgctgctgcggctgc 137 |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 19974907 gccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcggg 19974848 Query: 138 tttgcgtcctgcctcctggccctggtcctcatcgtcgccttcgtcgcgctcgtcgtctac 197 | ||| | ||| ||||||| ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 19974847 atggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctac 19974788 Query: 198 ctcgcgctccgcccctccaagccctccttctacctgcaggacctgcagctccactccatc 257 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| || Sbjct: 19974787 ctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtc 19974728 Query: 258 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19974727 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 19974668 Query: 318 aacgacaacgtcggcatctactacaggcgcctcgatgtcttcgtcacctaccgcgacgag 377 || ||| |||||||| || ||||| | |||||||| ||||||||||||||||||||||| Sbjct: 19974667 aatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaa 19974608 Query: 378 cccgtcaccgtgccgatctccctgccgcccatgtaccagggccaccgggacgtcaccatc 437 |||||||| ||||| ||||||| ||||| | |||||||||||||| |||||||||||| Sbjct: 19974607 cccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatc 19974548 Query: 438 tggtcgcccgtgctgtccggggagtccgtgcccgtcgccggctacgtcgccgaatgcttg 497 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||| | Sbjct: 19974547 tggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctc 19974488 Query: 498 aagcaggacatcgccgcggggtacgtcatgctgcaggtcaaggtcgacggccgcgtcaag 557 | ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 19974487 aggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaag 19974428 Query: 558 tggaaggtcggcagctgggaatccggcagctaccacctcttcgtcagctgccccgccatg 617 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 19974427 tggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatg 19974368 Query: 618 ctc 620 ||| Sbjct: 19974367 ctc 19974365 >dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 632 bits (319), Expect = e-178 Identities = 487/543 (89%) Strand = Plus / Minus Query: 78 gccatgggcaaggagaagcaccacaagcgcgagcaccacctccgccgctgctgcggctgc 137 |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 152508 gccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcggg 152449 Query: 138 tttgcgtcctgcctcctggccctggtcctcatcgtcgccttcgtcgcgctcgtcgtctac 197 | ||| | ||| ||||||| ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 152448 atggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctac 152389 Query: 198 ctcgcgctccgcccctccaagccctccttctacctgcaggacctgcagctccactccatc 257 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| || Sbjct: 152388 ctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtc 152329 Query: 258 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152328 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 152269 Query: 318 aacgacaacgtcggcatctactacaggcgcctcgatgtcttcgtcacctaccgcgacgag 377 || ||| |||||||| || ||||| | |||||||| ||||||||||||||||||||||| Sbjct: 152268 aatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaa 152209 Query: 378 cccgtcaccgtgccgatctccctgccgcccatgtaccagggccaccgggacgtcaccatc 437 |||||||| ||||| ||||||| ||||| | |||||||||||||| |||||||||||| Sbjct: 152208 cccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatc 152149 Query: 438 tggtcgcccgtgctgtccggggagtccgtgcccgtcgccggctacgtcgccgaatgcttg 497 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||| | Sbjct: 152148 tggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctc 152089 Query: 498 aagcaggacatcgccgcggggtacgtcatgctgcaggtcaaggtcgacggccgcgtcaag 557 | ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 152088 aggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaag 152029 Query: 558 tggaaggtcggcagctgggaatccggcagctaccacctcttcgtcagctgccccgccatg 617 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 152028 tggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatg 151969 Query: 618 ctc 620 ||| Sbjct: 151968 ctc 151966 >dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 632 bits (319), Expect = e-178 Identities = 487/543 (89%) Strand = Plus / Minus Query: 78 gccatgggcaaggagaagcaccacaagcgcgagcaccacctccgccgctgctgcggctgc 137 |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 79028 gccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcggg 78969 Query: 138 tttgcgtcctgcctcctggccctggtcctcatcgtcgccttcgtcgcgctcgtcgtctac 197 | ||| | ||| ||||||| ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 78968 atggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctac 78909 Query: 198 ctcgcgctccgcccctccaagccctccttctacctgcaggacctgcagctccactccatc 257 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| || Sbjct: 78908 ctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtc 78849 Query: 258 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78848 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 78789 Query: 318 aacgacaacgtcggcatctactacaggcgcctcgatgtcttcgtcacctaccgcgacgag 377 || ||| |||||||| || ||||| | |||||||| ||||||||||||||||||||||| Sbjct: 78788 aatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaa 78729 Query: 378 cccgtcaccgtgccgatctccctgccgcccatgtaccagggccaccgggacgtcaccatc 437 |||||||| ||||| ||||||| ||||| | |||||||||||||| |||||||||||| Sbjct: 78728 cccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatc 78669 Query: 438 tggtcgcccgtgctgtccggggagtccgtgcccgtcgccggctacgtcgccgaatgcttg 497 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||| | Sbjct: 78668 tggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctc 78609 Query: 498 aagcaggacatcgccgcggggtacgtcatgctgcaggtcaaggtcgacggccgcgtcaag 557 | ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 78608 aggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaag 78549 Query: 558 tggaaggtcggcagctgggaatccggcagctaccacctcttcgtcagctgccccgccatg 617 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 78548 tggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatg 78489 Query: 618 ctc 620 ||| Sbjct: 78488 ctc 78486 >dbj|AK109402.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G02, full insert sequence Length = 1071 Score = 632 bits (319), Expect = e-178 Identities = 487/543 (89%) Strand = Plus / Plus Query: 78 gccatgggcaaggagaagcaccacaagcgcgagcaccacctccgccgctgctgcggctgc 137 |||||| |||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 138 gccatgagcaaggagaagcaccacaagcgggagcaccacctccggcgatgctgcggcggg 197 Query: 138 tttgcgtcctgcctcctggccctggtcctcatcgtcgccttcgtcgcgctcgtcgtctac 197 | ||| | ||| ||||||| ||||||||| |||||| |||| ||||||||||||||||| Sbjct: 198 atggcggcgtgcatcctggcgctggtcctcgtcgtcggcttcatcgcgctcgtcgtctac 257 Query: 198 ctcgcgctccgcccctccaagccctccttctacctgcaggacctgcagctccactccatc 257 ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| || Sbjct: 258 ctcgcgctccgcccctccaagccgtccttctacctgcaggacctccagctccgctccgtc 317 Query: 258 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gacctcggcgacccctccctctccgccaccgcgcaggtcaccctcgcctcccgcaacccc 377 Query: 318 aacgacaacgtcggcatctactacaggcgcctcgatgtcttcgtcacctaccgcgacgag 377 || ||| |||||||| || ||||| | |||||||| ||||||||||||||||||||||| Sbjct: 378 aatgaccacgtcggcgtccactaccgccgcctcgacgtcttcgtcacctaccgcgacgaa 437 Query: 378 cccgtcaccgtgccgatctccctgccgcccatgtaccagggccaccgggacgtcaccatc 437 |||||||| ||||| ||||||| ||||| | |||||||||||||| |||||||||||| Sbjct: 438 cccgtcacggtgcccgtctccctcccgccgacctaccagggccaccgcgacgtcaccatc 497 Query: 438 tggtcgcccgtgctgtccggggagtccgtgcccgtcgccggctacgtcgccgaatgcttg 497 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||| | Sbjct: 498 tggtcgcccgtgctctccggcgagtccgtccccgtggcgggcttcgtcgccgacgcgctc 557 Query: 498 aagcaggacatcgccgcggggtacgtcatgctgcaggtcaaggtcgacggccgcgtcaag 557 | ||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 558 aggcaggacgtcgccgccgggtacgtcgcgctgcaggtgaaggtcgacggccgcgtcaag 617 Query: 558 tggaaggtcggcagctgggaatccggcagctaccacctcttcgtcagctgccccgccatg 617 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 618 tggaaggtcggcagctgggtctccggcagctaccacctctttgtcagctgccccgccatg 677 Query: 618 ctc 620 ||| Sbjct: 678 ctc 680