BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004l17 (632 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001062002.1| Oryza sativa (japonica cultivar-group) Os05g... 222 1e-54 dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54 dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54 emb|CT833618.1| Oryza sativa (indica cultivar-group) cDNA clone:... 141 4e-30 gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 133 9e-28 >ref|NM_001062002.1| Oryza sativa (japonica cultivar-group) Os05g0397300 (Os05g0397300) mRNA, complete cds Length = 1103 Score = 222 bits (112), Expect = 1e-54 Identities = 211/243 (86%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 174 gaggagaagaagatggatgtggagatgctggaggacgacgtcttcttcgccgagctcagc 233 |||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 146 gaggagaaaaggatggaggtggagatgatggaggacgacgtgttcttcgccgagctcagc 205 Query: 234 aagcggatatcgctgctaatcaccgacgacgacgaggc---cgacttcggcaccgcgcag 290 |||||||||||||| || ||||| |||||||||||||| |||||||||| |||| | Sbjct: 206 aagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgc 265 Query: 291 ttccccgc------cgccgtgccagtcgtcccgggattctcggtcgcccatgtgccgcag 344 |||||||| ||||| ||| | |||||||||||||| |||||||||||||| | Sbjct: 266 ttccccgcctccgccgccgcgcc---catcccgggattctcgctcgcccatgtgccgatg 322 Query: 345 ggcgcgtcgatgttggcgccaccggcgtacacgttgtaccaccacgccgccagctacaac 404 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 323 ggcgcgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagctataac 382 Query: 405 aac 407 ||| Sbjct: 383 aac 385 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 443 gcagcagcagtgcggcagcaagggcaccggggtgttcatcccccgctcctcgccggg 499 |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 445 gcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggg 501 >dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066C05, full insert sequence Length = 1104 Score = 222 bits (112), Expect = 1e-54 Identities = 211/243 (86%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 174 gaggagaagaagatggatgtggagatgctggaggacgacgtcttcttcgccgagctcagc 233 |||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 147 gaggagaaaaggatggaggtggagatgatggaggacgacgtgttcttcgccgagctcagc 206 Query: 234 aagcggatatcgctgctaatcaccgacgacgacgaggc---cgacttcggcaccgcgcag 290 |||||||||||||| || ||||| |||||||||||||| |||||||||| |||| | Sbjct: 207 aagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgc 266 Query: 291 ttccccgc------cgccgtgccagtcgtcccgggattctcggtcgcccatgtgccgcag 344 |||||||| ||||| ||| | |||||||||||||| |||||||||||||| | Sbjct: 267 ttccccgcctccgccgccgcgcc---catcccgggattctcgctcgcccatgtgccgatg 323 Query: 345 ggcgcgtcgatgttggcgccaccggcgtacacgttgtaccaccacgccgccagctacaac 404 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 324 ggcgcgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagctataac 383 Query: 405 aac 407 ||| Sbjct: 384 aac 386 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 443 gcagcagcagtgcggcagcaagggcaccggggtgttcatcccccgctcctcgccggg 499 |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 446 gcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggg 502 >dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B09, full insert sequence Length = 603 Score = 222 bits (112), Expect = 1e-54 Identities = 211/243 (86%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 174 gaggagaagaagatggatgtggagatgctggaggacgacgtcttcttcgccgagctcagc 233 |||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 146 gaggagaaaaggatggaggtggagatgatggaggacgacgtgttcttcgccgagctcagc 205 Query: 234 aagcggatatcgctgctaatcaccgacgacgacgaggc---cgacttcggcaccgcgcag 290 |||||||||||||| || ||||| |||||||||||||| |||||||||| |||| | Sbjct: 206 aagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgc 265 Query: 291 ttccccgc------cgccgtgccagtcgtcccgggattctcggtcgcccatgtgccgcag 344 |||||||| ||||| ||| | |||||||||||||| |||||||||||||| | Sbjct: 266 ttccccgcctccgccgccgcgcc---catcccgggattctcgctcgcccatgtgccgatg 322 Query: 345 ggcgcgtcgatgttggcgccaccggcgtacacgttgtaccaccacgccgccagctacaac 404 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 323 ggcgcgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagctataac 382 Query: 405 aac 407 ||| Sbjct: 383 aac 385 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 443 gcagcagcagtgcggcagcaagggcaccggggtgttcatcccccgctcctcgccggg 499 |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 445 gcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggg 501 >emb|CT833618.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN041L23, full insert sequence Length = 1028 Score = 141 bits (71), Expect = 4e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 317 gggattctcggtcgcccatgtgccgcagggcgcgtcgatgttggcgccaccggcgtacac 376 |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||| Sbjct: 385 gggattctcgctcgcccatgtgccgatgggcgcgtcgatggtggcgccaccggcctacac 444 Query: 377 gttgtaccaccacgccgccagctacaacaac 407 ||||||||||||||||||||||||||||||| Sbjct: 445 gttgtaccaccacgccgccagctacaacaac 475 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 443 gcagcagcagtgcggcagcaagggcaccggggtgttcatcccccgctcctcgccgggttc 502 |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| || Sbjct: 535 gcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccgggatc 594 Query: 503 ggcgcactccaggaagaagggaaagaacaag 533 | ||| ||| ||||||||| |||| |||| Sbjct: 595 cgtccaccccaagaagaagggcaagagcaag 625 >gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 133 bits (67), Expect = 9e-28 Identities = 85/91 (93%) Strand = Plus / Minus Query: 317 gggattctcggtcgcccatgtgccgcagggcgcgtcgatgttggcgccaccggcgtacac 376 |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| ||||| Sbjct: 105931 gggattctcgctcgcccatgtgccgatgggcgcgtcgatggtggcgccaccggcctacac 105872 Query: 377 gttgtaccaccacgccgccagctacaacaac 407 |||||||||||||||||||||||| |||||| Sbjct: 105871 gttgtaccaccacgccgccagctataacaac 105841 Score = 133 bits (67), Expect = 9e-28 Identities = 114/129 (88%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 174 gaggagaagaagatggatgtggagatgctggaggacgacgtcttcttcgccgagctcagc 233 |||||||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 108992 gaggagaaaaggatggaggtggagatgatggaggacgacgtgttcttcgccgagctcagc 108933 Query: 234 aagcggatatcgctgctaatcaccgacgacgacga---ggccgacttcggcaccgcgcag 290 |||||||||||||| || ||||| ||||||||||| ||||||||||||| |||| | Sbjct: 108932 aagcggatatcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgc 108873 Query: 291 ttccccgcc 299 ||||||||| Sbjct: 108872 ttccccgcc 108864 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 443 gcagcagcagtgcggcagcaagggcaccggggtgttcatcccccgctcctcgccggg 499 |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 105781 gcagcagctgtgcggcagcaagggcaccggcgtgttcatcccccggtcgtcgccggg 105725