BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004l01 (751 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:... 281 2e-72 ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g... 281 2e-72 dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 2e-72 gb|DQ244151.1| Zea mays clone 2586 mRNA sequence 242 2e-60 emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein 242 2e-60 >emb|CT830585.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022M13, full insert sequence Length = 671 Score = 281 bits (142), Expect = 2e-72 Identities = 353/422 (83%), Gaps = 1/422 (0%) Strand = Plus / Plus Query: 66 gctctctccctctcccatccaagatgaagtttgttgctgcctatctgcttgctgtcctgg 125 ||||||||| ||||||||||| ||||||||| || ||||||||||| | || |||| Sbjct: 65 gctctctccatctcccatccaggatgaagttcatttctgcctatctgatggcctatctgg 124 Query: 126 ctggcaaccccagcccctctgcagacgatttgacgtctattctggagtcagttggtgttg 185 |||||||| |||||||| |||| || |||||||| | |||||||||||||||||| || Sbjct: 125 ctggcaactccagccccactgcggaggatttgacaacgattctggagtcagttggttgtg 184 Query: 186 agattgacagtgtaagggttgaactgctgttgtcccaactgagtggtaaggacattaatg 245 | || |||| || || | | ||||| |||||||| ||| ||||||| |||||||| | || Sbjct: 185 aaatcgacaatgcaaagatggaactcctgttgtctcaagtgagtggcaaggacatcactg 244 Query: 246 aggtcattgctgccggtagggagaagtttgcttcagttccatgtggtggtggcggtgtag 305 || |||| ||| || ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 245 agctcatcgcttgtggcagggagaagtttgcttcagttccatctggtggtggtggtgtag 304 Query: 306 ctgttgcagcagctgctcctaccagcggtggtgctggcgctgctcctgcagctgaatcga 365 ||||||| || ||||||||| | |||||||||||| | ||||||||||||||| ||| Sbjct: 305 ctgttgctgctgctgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcga 364 Query: 366 aaaaagaagagaaggttgaggagaaggaagagagtgatgatgacatgggcttcagtctgt 425 | |||||||| ||||| || ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 365 agaaagaagataaggtcgaagagaaggaagaaagtgatgatgacatgggcttcagtttgt 424 Query: 426 tcgactaagtggtgggggtcttctcttgtatcatcagtatcagtctttgggcaggaaact 485 | |||| |||| | | |||| ||||| |||||||| || ||| ||||| |||||||||| Sbjct: 425 ttgactgagtgat-gcggtcacctcttctatcatcaataccagactttgcgcaggaaact 483 Query: 486 ag 487 || Sbjct: 484 ag 485 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 542 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 601 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 602 tacttcactggtgaaccatgcttttgctatc 632 >ref|NM_001048803.1| Oryza sativa (japonica cultivar-group) Os01g0191100 (Os01g0191100) mRNA, complete cds Length = 693 Score = 281 bits (142), Expect = 2e-72 Identities = 353/422 (83%), Gaps = 1/422 (0%) Strand = Plus / Plus Query: 66 gctctctccctctcccatccaagatgaagtttgttgctgcctatctgcttgctgtcctgg 125 ||||||||| ||||||||||| ||||||||| || ||||||||||| | || |||| Sbjct: 68 gctctctccatctcccatccaggatgaagttcatttctgcctatctgatggcctatctgg 127 Query: 126 ctggcaaccccagcccctctgcagacgatttgacgtctattctggagtcagttggtgttg 185 |||||||| |||||||| |||| || |||||||| | |||||||||||||||||| || Sbjct: 128 ctggcaactccagccccactgcggaggatttgacaacgattctggagtcagttggttgtg 187 Query: 186 agattgacagtgtaagggttgaactgctgttgtcccaactgagtggtaaggacattaatg 245 | || |||| || || | | ||||| |||||||| ||| ||||||| |||||||| | || Sbjct: 188 aaatcgacaatgcaaagatggaactcctgttgtctcaagtgagtggcaaggacatcactg 247 Query: 246 aggtcattgctgccggtagggagaagtttgcttcagttccatgtggtggtggcggtgtag 305 || |||| ||| || ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 248 agctcatcgcttgtggcagggagaagtttgcttcagttccatctggtggtggtggtgtag 307 Query: 306 ctgttgcagcagctgctcctaccagcggtggtgctggcgctgctcctgcagctgaatcga 365 ||||||| || ||||||||| | |||||||||||| | ||||||||||||||| ||| Sbjct: 308 ctgttgctgctgctgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcga 367 Query: 366 aaaaagaagagaaggttgaggagaaggaagagagtgatgatgacatgggcttcagtctgt 425 | |||||||| ||||| || ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 368 agaaagaagataaggtcgaagagaaggaagaaagtgatgatgacatgggcttcagtttgt 427 Query: 426 tcgactaagtggtgggggtcttctcttgtatcatcagtatcagtctttgggcaggaaact 485 | |||| |||| | | |||| ||||| |||||||| || ||| ||||| |||||||||| Sbjct: 428 ttgactgagtgat-gcggtcacctcttctatcatcaataccagactttgcgcaggaaact 486 Query: 486 ag 487 || Sbjct: 487 ag 488 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 281 bits (142), Expect = 2e-72 Identities = 353/422 (83%), Gaps = 1/422 (0%) Strand = Plus / Plus Query: 66 gctctctccctctcccatccaagatgaagtttgttgctgcctatctgcttgctgtcctgg 125 ||||||||| ||||||||||| ||||||||| || ||||||||||| | || |||| Sbjct: 68 gctctctccatctcccatccaggatgaagttcatttctgcctatctgatggcctatctgg 127 Query: 126 ctggcaaccccagcccctctgcagacgatttgacgtctattctggagtcagttggtgttg 185 |||||||| |||||||| |||| || |||||||| | |||||||||||||||||| || Sbjct: 128 ctggcaactccagccccactgcggaggatttgacaacgattctggagtcagttggttgtg 187 Query: 186 agattgacagtgtaagggttgaactgctgttgtcccaactgagtggtaaggacattaatg 245 | || |||| || || | | ||||| |||||||| ||| ||||||| |||||||| | || Sbjct: 188 aaatcgacaatgcaaagatggaactcctgttgtctcaagtgagtggcaaggacatcactg 247 Query: 246 aggtcattgctgccggtagggagaagtttgcttcagttccatgtggtggtggcggtgtag 305 || |||| ||| || ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 248 agctcatcgcttgtggcagggagaagtttgcttcagttccatctggtggtggtggtgtag 307 Query: 306 ctgttgcagcagctgctcctaccagcggtggtgctggcgctgctcctgcagctgaatcga 365 ||||||| || ||||||||| | |||||||||||| | ||||||||||||||| ||| Sbjct: 308 ctgttgctgctgctgctcctgctgccggtggtgctggtggtgctcctgcagctgaggcga 367 Query: 366 aaaaagaagagaaggttgaggagaaggaagagagtgatgatgacatgggcttcagtctgt 425 | |||||||| ||||| || ||||||||||| |||||||||||||||||||||||| ||| Sbjct: 368 agaaagaagataaggtcgaagagaaggaagaaagtgatgatgacatgggcttcagtttgt 427 Query: 426 tcgactaagtggtgggggtcttctcttgtatcatcagtatcagtctttgggcaggaaact 485 | |||| |||| | | |||| ||||| |||||||| || ||| ||||| |||||||||| Sbjct: 428 ttgactgagtgat-gcggtcacctcttctatcatcaataccagactttgcgcaggaaact 486 Query: 486 ag 487 || Sbjct: 487 ag 488 Score = 93.7 bits (47), Expect = 1e-15 Identities = 80/91 (87%) Strand = Plus / Plus Query: 540 ggaaagactttgctacctactatgttttgatatgtagtaatccagccgtaggttgctggt 599 ||||||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 545 ggaaagactatgcttcctactatgttttgatatgtagtaacgcagccataggttgctggt 604 Query: 600 tgatttaccggtgaaccatacctttgctatc 630 | || || |||||||||| | ||||||||| Sbjct: 605 tacttcactggtgaaccatgcttttgctatc 635 >gb|DQ244151.1| Zea mays clone 2586 mRNA sequence Length = 797 Score = 242 bits (122), Expect = 2e-60 Identities = 289/345 (83%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 88 gatgaagtttgttgctgcctatctgcttgctgtcctggctggcaaccccagcccctctgc 147 ||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| || Sbjct: 174 gatgaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgc 233 Query: 148 agacgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttga 207 ||||||||||| | ||||||||||||||||| ||| |||||| || || | | || Sbjct: 234 tgacgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatgga 293 Query: 208 actgctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtaggga 267 ||| ||| ||||||||||||| ||||||||||| | ||| ||||||| || || ||||| Sbjct: 294 actcctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcaggga 353 Query: 268 gaagtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctac 327 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 354 gaagtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct-- 411 Query: 328 cagcggtggtgctggcgctgctcctgcagctgaatcgaaaaaagaagagaaggttgagga 387 | || || || ||||||||||||||||| | || |||||||||||||| || || Sbjct: 412 ----gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaaga 467 Query: 388 gaaggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 ||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 468 gaaggaagaaagcgatgatgatatgggcttcagcctcttcgacta 512 >emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 242 bits (122), Expect = 2e-60 Identities = 289/345 (83%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 88 gatgaagtttgttgctgcctatctgcttgctgtcctggctggcaaccccagcccctctgc 147 ||||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||| || Sbjct: 42 gatgaagtttgttgctgcctacctgcttgctgtcctcgctgggaacgccagcccctccgc 101 Query: 148 agacgatttgacgtctattctggagtcagttggtgttgagattgacagtgtaagggttga 207 ||||||||||| | ||||||||||||||||| ||| |||||| || || | | || Sbjct: 102 tgacgatttgactgccattctggagtcagttggctgtgaagttgacaatgaaaagatgga 161 Query: 208 actgctgttgtcccaactgagtggtaaggacattaatgaggtcattgctgccggtaggga 267 ||| ||| ||||||||||||| ||||||||||| | ||| ||||||| || || ||||| Sbjct: 162 actcctgctgtcccaactgagcggtaaggacatcaccgagctcattgccgcgggcaggga 221 Query: 268 gaagtttgcttcagttccatgtggtggtggcggtgtagctgttgcagcagctgctcctac 327 ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 222 gaagtttgcttcagtcccatgtggtggcggcggtgtcgctgttgcggcagctgcacct-- 279 Query: 328 cagcggtggtgctggcgctgctcctgcagctgaatcgaaaaaagaagagaaggttgagga 387 | || || || ||||||||||||||||| | || |||||||||||||| || || Sbjct: 280 ----gctgctggcggagctgctcctgcagctgaggcaaagaaagaagagaaggtggaaga 335 Query: 388 gaaggaagagagtgatgatgacatgggcttcagtctgttcgacta 432 ||||||||| || |||||||| ||||||||||| || |||||||| Sbjct: 336 gaaggaagaaagcgatgatgatatgggcttcagcctcttcgacta 380