BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004k17 (1194 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051580.1| Oryza sativa (japonica cultivar-group) Os01g... 281 3e-72 dbj|AK066619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 3e-72 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 gb|AY105516.1| Zea mays PCO092373 mRNA sequence 137 1e-28 >ref|NM_001051580.1| Oryza sativa (japonica cultivar-group) Os01g0889200 (Os01g0889200) mRNA, partial cds Length = 3405 Score = 281 bits (142), Expect = 3e-72 Identities = 383/462 (82%), Gaps = 6/462 (1%) Strand = Plus / Plus Query: 559 cgatgacaatgttgagttacaggagactcagccaagttcaactgaatgtgaaagttcagt 618 |||| |||||||||| ||| |||||| || ||||||||||||||||||||| ||| | Sbjct: 2706 cgataacaatgttgaattagaggagattcgaccaagttcaactgaatgtgaatcttccat 2765 Query: 619 tcgtccagcaaaagagctcaatttgcttgaagaagatgacaaaagaagaatgttcctatt 678 | ||||||| ||||||| ||||| || || ||| ||||| ||||||||| ||||||| Sbjct: 2766 ccatccagcagaagagctgaatttactcgagcaaggtgacacgagaagaatgctcctatt 2825 Query: 679 ccagttgccgaaatctcttcctttgccaaaaataccatccactgtagttgaaaggaatgg 738 ||||||||| ||||||||||| ||||||| |||| ||| ||| ||||||||||||||| Sbjct: 2826 ccagttgccaaaatctcttccgttgccaagaata---tccgctgcagttgaaaggaatgg 2882 Query: 739 aaagaccattagcaaggaggtgaaagaaggatacaatctgaaagatttgcctggggggta 798 ||| ||| |||||||||||||||||||| ||| ||||||| ||||| || || Sbjct: 2883 aaaagccagggacaaggaggtgaaagaaggatccaacttgaaagaattgccacaaggata 2942 Query: 799 tttgggcaaaatactggtatacaagagcggcaagatcaagatgaagttgggagatgtcat 858 |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 2943 tttgggcaaaatggtggtgtacaagagcggcaagatcaagatgaagttgggggatgtcat 3002 Query: 859 gtttgacgtgaacccaggagcggagtgtgggatggcgcaacatgcagtagctatgaacac 918 |||||| ||||||||||||| |||||| ||||||| ||||||| | ||||| ||||| Sbjct: 3003 gtttgatgtgaacccaggagaagagtgtaggatggcacaacatgtggctgctatcaacac 3062 Query: 919 tagagagaaacattgttgcctacttggggagattgaaaatcagcatgttgtcgtgactcc 978 | |||||| |||||||| ||||||| ||||| || | | |||||| || |||||||| Sbjct: 3063 caaagagaagcattgttgtttacttggcgagatcgagagccggcatgtcgttgtgactcc 3122 Query: 979 ggatgttgactc---attgttgaatgacaatagaggttaggt 1017 ||||| ||||| ||||||||||||||||||||||||| Sbjct: 3123 agatgtggactcgctgctgttgaatgacaatagaggttaggt 3164 Score = 184 bits (93), Expect = 6e-43 Identities = 203/239 (84%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 195 agaagctgaagttcaaaccaaaagtgccagcacaaaagccaaaaaaatcatttccagaaa 254 |||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||| Sbjct: 2350 agaagctgaagttcaagccaaaagtgccaccacaaaagccaagaaaatcagttccagaaa 2409 Query: 255 agcaaca---ggaagagccaaaaccaattgatgaagagttggtgaagagactgaggactg 311 ||| | | |||| || |||| |||||||||||||| ||| |||||||||||| ||||| Sbjct: 2410 agccaaacctggaacagtcaaagccaattgatgaagaattgatgaagagactgaagactg 2469 Query: 312 gcaaaggagctgcaaaaactttgccaagtacaaaagatgagcactcagcacagaattccc 371 || |||||||| ||||||| ||| |||||| ||||||||| |||||| ||||||| | | Sbjct: 2470 gccaaggagctacaaaaacattgtcaagtataaaagatgaacactcaacacagaacccac 2529 Query: 372 cctcgacactttcgtctgcacctggagttagcttatcactgtcgcaggcaggagggcac 430 |||| || |||| |||||| || | ||||||||| ||||| | ||| ||||||||||| Sbjct: 2530 cctcaactgtttcttctgcagctagtgttagcttaacactgccacagtcaggagggcac 2588 >dbj|AK066619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N16, full insert sequence Length = 3405 Score = 281 bits (142), Expect = 3e-72 Identities = 383/462 (82%), Gaps = 6/462 (1%) Strand = Plus / Plus Query: 559 cgatgacaatgttgagttacaggagactcagccaagttcaactgaatgtgaaagttcagt 618 |||| |||||||||| ||| |||||| || ||||||||||||||||||||| ||| | Sbjct: 2706 cgataacaatgttgaattagaggagattcgaccaagttcaactgaatgtgaatcttccat 2765 Query: 619 tcgtccagcaaaagagctcaatttgcttgaagaagatgacaaaagaagaatgttcctatt 678 | ||||||| ||||||| ||||| || || ||| ||||| ||||||||| ||||||| Sbjct: 2766 ccatccagcagaagagctgaatttactcgagcaaggtgacacgagaagaatgctcctatt 2825 Query: 679 ccagttgccgaaatctcttcctttgccaaaaataccatccactgtagttgaaaggaatgg 738 ||||||||| ||||||||||| ||||||| |||| ||| ||| ||||||||||||||| Sbjct: 2826 ccagttgccaaaatctcttccgttgccaagaata---tccgctgcagttgaaaggaatgg 2882 Query: 739 aaagaccattagcaaggaggtgaaagaaggatacaatctgaaagatttgcctggggggta 798 ||| ||| |||||||||||||||||||| ||| ||||||| ||||| || || Sbjct: 2883 aaaagccagggacaaggaggtgaaagaaggatccaacttgaaagaattgccacaaggata 2942 Query: 799 tttgggcaaaatactggtatacaagagcggcaagatcaagatgaagttgggagatgtcat 858 |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 2943 tttgggcaaaatggtggtgtacaagagcggcaagatcaagatgaagttgggggatgtcat 3002 Query: 859 gtttgacgtgaacccaggagcggagtgtgggatggcgcaacatgcagtagctatgaacac 918 |||||| ||||||||||||| |||||| ||||||| ||||||| | ||||| ||||| Sbjct: 3003 gtttgatgtgaacccaggagaagagtgtaggatggcacaacatgtggctgctatcaacac 3062 Query: 919 tagagagaaacattgttgcctacttggggagattgaaaatcagcatgttgtcgtgactcc 978 | |||||| |||||||| ||||||| ||||| || | | |||||| || |||||||| Sbjct: 3063 caaagagaagcattgttgtttacttggcgagatcgagagccggcatgtcgttgtgactcc 3122 Query: 979 ggatgttgactc---attgttgaatgacaatagaggttaggt 1017 ||||| ||||| ||||||||||||||||||||||||| Sbjct: 3123 agatgtggactcgctgctgttgaatgacaatagaggttaggt 3164 Score = 184 bits (93), Expect = 6e-43 Identities = 203/239 (84%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 195 agaagctgaagttcaaaccaaaagtgccagcacaaaagccaaaaaaatcatttccagaaa 254 |||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||| Sbjct: 2350 agaagctgaagttcaagccaaaagtgccaccacaaaagccaagaaaatcagttccagaaa 2409 Query: 255 agcaaca---ggaagagccaaaaccaattgatgaagagttggtgaagagactgaggactg 311 ||| | | |||| || |||| |||||||||||||| ||| |||||||||||| ||||| Sbjct: 2410 agccaaacctggaacagtcaaagccaattgatgaagaattgatgaagagactgaagactg 2469 Query: 312 gcaaaggagctgcaaaaactttgccaagtacaaaagatgagcactcagcacagaattccc 371 || |||||||| ||||||| ||| |||||| ||||||||| |||||| ||||||| | | Sbjct: 2470 gccaaggagctacaaaaacattgtcaagtataaaagatgaacactcaacacagaacccac 2529 Query: 372 cctcgacactttcgtctgcacctggagttagcttatcactgtcgcaggcaggagggcac 430 |||| || |||| |||||| || | ||||||||| ||||| | ||| ||||||||||| Sbjct: 2530 cctcaactgtttcttctgcagctagtgttagcttaacactgccacagtcaggagggcac 2588 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 176 bits (89), Expect = 1e-40 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 662 agaagaatgttcctattccagttgccgaaatctcttcctttgccaaaaataccatccact 721 ||||||||| |||||||||||||||| ||||||||||| ||||||| |||| ||| || Sbjct: 38653325 agaagaatgctcctattccagttgccaaaatctcttccgttgccaagaata---tccgct 38653269 Query: 722 gtagttgaaaggaatggaaagaccattagcaaggaggtgaaagaaggatacaatctgaaa 781 | |||||||||||||||||| ||| |||||||||||||||||||| ||| ||||| Sbjct: 38653268 gcagttgaaaggaatggaaaagccagggacaaggaggtgaaagaaggatccaacttgaaa 38653209 Query: 782 gatttgcctggggggtatttgggcaaaatactggtatacaagagcggcaagatcaagatg 841 || ||||| || |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 38653208 gaattgccacaaggatatttgggcaaaatggtggtgtacaagagcggcaagatcaagatg 38653149 Query: 842 aagttgggagatgtcatgtttga 864 |||||||| |||||||||||||| Sbjct: 38653148 aagttgggggatgtcatgtttga 38653126 Score = 93.7 bits (47), Expect = 2e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 194 cagaagctgaagttcaaaccaaaagtgccagcacaaaagccaaaaaaatcatttccagaa 253 ||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||| Sbjct: 38654431 cagaagctgaagttcaagccaaaagtgccaccacaaaagccaagaaaatcagttccagaa 38654372 Query: 254 aag 256 ||| Sbjct: 38654371 aag 38654369 >dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 176 bits (89), Expect = 1e-40 Identities = 175/203 (86%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 662 agaagaatgttcctattccagttgccgaaatctcttcctttgccaaaaataccatccact 721 ||||||||| |||||||||||||||| ||||||||||| ||||||| |||| ||| || Sbjct: 111298 agaagaatgctcctattccagttgccaaaatctcttccgttgccaagaata---tccgct 111242 Query: 722 gtagttgaaaggaatggaaagaccattagcaaggaggtgaaagaaggatacaatctgaaa 781 | |||||||||||||||||| ||| |||||||||||||||||||| ||| ||||| Sbjct: 111241 gcagttgaaaggaatggaaaagccagggacaaggaggtgaaagaaggatccaacttgaaa 111182 Query: 782 gatttgcctggggggtatttgggcaaaatactggtatacaagagcggcaagatcaagatg 841 || ||||| || |||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 111181 gaattgccacaaggatatttgggcaaaatggtggtgtacaagagcggcaagatcaagatg 111122 Query: 842 aagttgggagatgtcatgtttga 864 |||||||| |||||||||||||| Sbjct: 111121 aagttgggggatgtcatgtttga 111099 Score = 93.7 bits (47), Expect = 2e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 194 cagaagctgaagttcaaaccaaaagtgccagcacaaaagccaaaaaaatcatttccagaa 253 ||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||| Sbjct: 112404 cagaagctgaagttcaagccaaaagtgccaccacaaaagccaagaaaatcagttccagaa 112345 Query: 254 aag 256 ||| Sbjct: 112344 aag 112342 >gb|AY105516.1| Zea mays PCO092373 mRNA sequence Length = 1199 Score = 137 bits (69), Expect = 1e-28 Identities = 174/209 (83%) Strand = Plus / Plus Query: 797 tatttgggcaaaatactggtatacaagagcggcaagatcaagatgaagttgggagatgtc 856 |||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| || Sbjct: 709 tatttgggcaaaatgctagtatacaagagcggcaagatcaaaatgaagttaggagacatc 768 Query: 857 atgtttgacgtgaacccaggagcggagtgtgggatggcgcaacatgcagtagctatgaac 916 || ||||| ||||||||||||| || || ||||| ||| | |||||||||| | ||| Sbjct: 769 atctttgatgtgaacccaggagtagaaagtaggatgctgcagcgtgcagtagctctcaac 828 Query: 917 actagagagaaacattgttgcctacttggggagattgaaaatcagcatgttgtcgtgact 976 ||| |||| ||||| |||||| | ||||| |||||||| |||| |||||| | |||||| Sbjct: 829 actcgagacaaacactgttgcttgcttggagagattgagaatcgtcatgttattgtgact 888 Query: 977 ccggatgttgactcattgttgaatgacaa 1005 || ||||||| || |||||||| ||||| Sbjct: 889 cccaatgttgattctttgttgaacgacaa 917