BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004h13 (895 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT837975.1| Oryza sativa (indica cultivar-group) cDNA clone:... 480 e-132 ref|NM_001062918.1| Oryza sativa (japonica cultivar-group) Os05g... 464 e-127 dbj|AB095440.1| Oryza sativa (japonica cultivar-group) OsHAP3C m... 464 e-127 gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 238 3e-59 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 238 3e-59 >emb|CT837975.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA013H22, full insert sequence Length = 880 Score = 480 bits (242), Expect = e-132 Identities = 381/426 (89%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 169 ggcggcggcggaggcgcgggagggagggagcaggaacggttcctgccgatcgccaacatc 228 |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 188 ggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatc 247 Query: 229 gggcgcgtcatgcggcggggcgtgccggagaacgggaaaatcgccaaggacgccaaggag 288 || ||| ||||||| |||| ||||||||||||||| || |||||||||||| |||||||| Sbjct: 248 ggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggag 307 Query: 289 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaggcgagtgacaag 348 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 308 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcgacaag 367 Query: 349 tgcatgaaggagaagcggaagaccatcaacggggacgacctgatctggtccatgggtacg 408 ||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 368 tgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgggcacg 427 Query: 409 ctcggcttcgaggactacgtcgagccccttaagctgtacctcaagctcttccgggagaca 468 ||||| ||||||||||| |||||||| || ||||| ||||||| ||||| ||||||||| Sbjct: 428 ctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgggagacg 487 Query: 469 gagggtgacacaaagggttcgagatcttctgatcagcccggaaagaaagagattgtactt 528 |||||||||||||||||||| ||| ||||||| | ||| | ||||||||| |||||||| Sbjct: 488 gagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttgtactt 547 Query: 529 aacggggaacctggatcatcgtttgagggcatgtaggatgaaggagggtgatactgatta 588 || || || ||||||||||||||||| ||||||||||| | ||||| |||||||||||| Sbjct: 548 aatggagatcctggatcatcgtttgaaggcatgtaggacg-aggagtgtgatactgattg 606 Query: 589 gcacgc 594 |||||| Sbjct: 607 gcacgc 612 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/93 (87%), Gaps = 8/93 (8%) Strand = Plus / Plus Query: 29 agatccggcggccggtcgcgtcctcctcccgctcccacgtcccacccaccccaaccaacg 88 |||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| Sbjct: 45 agatccggcggccggtggcgtcctcctccctctccctcctccc--------caaccaacg 96 Query: 89 gcgctgatcccctccgccatctccgtccatctc 121 ||||||||||||||||||||||||||||||||| Sbjct: 97 gcgctgatcccctccgccatctccgtccatctc 129 >ref|NM_001062918.1| Oryza sativa (japonica cultivar-group) Os05g0573500 (Os05g0573500) mRNA, complete cds Length = 822 Score = 464 bits (234), Expect = e-127 Identities = 357/398 (89%) Strand = Plus / Plus Query: 169 ggcggcggcggaggcgcgggagggagggagcaggaacggttcctgccgatcgccaacatc 228 |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 145 ggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatc 204 Query: 229 gggcgcgtcatgcggcggggcgtgccggagaacgggaaaatcgccaaggacgccaaggag 288 || ||| ||||||| |||| ||||||||||||||| || |||||||||||| |||||||| Sbjct: 205 ggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggag 264 Query: 289 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaggcgagtgacaag 348 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 265 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcgacaag 324 Query: 349 tgcatgaaggagaagcggaagaccatcaacggggacgacctgatctggtccatgggtacg 408 ||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 325 tgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgggcacg 384 Query: 409 ctcggcttcgaggactacgtcgagccccttaagctgtacctcaagctcttccgggagaca 468 ||||| ||||||||||| |||||||| || ||||| ||||||| ||||| ||||||||| Sbjct: 385 ctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgggagacg 444 Query: 469 gagggtgacacaaagggttcgagatcttctgatcagcccggaaagaaagagattgtactt 528 |||||||||||||||||||| ||| ||||||| | ||| | ||||||||| |||||||| Sbjct: 445 gagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttgtactt 504 Query: 529 aacggggaacctggatcatcgtttgagggcatgtagga 566 || || || ||||||||||||||||| ||||||||||| Sbjct: 505 aatggagatcctggatcatcgtttgaaggcatgtagga 542 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/93 (87%), Gaps = 8/93 (8%) Strand = Plus / Plus Query: 29 agatccggcggccggtcgcgtcctcctcccgctcccacgtcccacccaccccaaccaacg 88 |||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| Sbjct: 5 agatccggcggccggtggcgtcctcctccctctccctcctccc--------caaccaacg 56 Query: 89 gcgctgatcccctccgccatctccgtccatctc 121 ||||||||||||||||||||||||||||||||| Sbjct: 57 gcgctgatcccctccgccatctccgtccatctc 89 >dbj|AB095440.1| Oryza sativa (japonica cultivar-group) OsHAP3C mRNA for HAP3, complete cds Length = 837 Score = 464 bits (234), Expect = e-127 Identities = 357/398 (89%) Strand = Plus / Plus Query: 169 ggcggcggcggaggcgcgggagggagggagcaggaacggttcctgccgatcgccaacatc 228 |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 145 ggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatc 204 Query: 229 gggcgcgtcatgcggcggggcgtgccggagaacgggaaaatcgccaaggacgccaaggag 288 || ||| ||||||| |||| ||||||||||||||| || |||||||||||| |||||||| Sbjct: 205 ggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggag 264 Query: 289 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaggcgagtgacaag 348 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 265 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcgacaag 324 Query: 349 tgcatgaaggagaagcggaagaccatcaacggggacgacctgatctggtccatgggtacg 408 ||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 325 tgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgggcacg 384 Query: 409 ctcggcttcgaggactacgtcgagccccttaagctgtacctcaagctcttccgggagaca 468 ||||| ||||||||||| |||||||| || ||||| ||||||| ||||| ||||||||| Sbjct: 385 ctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgggagacg 444 Query: 469 gagggtgacacaaagggttcgagatcttctgatcagcccggaaagaaagagattgtactt 528 |||||||||||||||||||| ||| ||||||| | ||| | ||||||||| |||||||| Sbjct: 445 gagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttgtactt 504 Query: 529 aacggggaacctggatcatcgtttgagggcatgtagga 566 || || || ||||||||||||||||| ||||||||||| Sbjct: 505 aatggagatcctggatcatcgtttgaaggcatgtagga 542 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/93 (87%), Gaps = 8/93 (8%) Strand = Plus / Plus Query: 29 agatccggcggccggtcgcgtcctcctcccgctcccacgtcccacccaccccaaccaacg 88 |||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| Sbjct: 5 agatccggcggccggtggcgtcctcctccctctccctcctccc--------caaccaacg 56 Query: 89 gcgctgatcccctccgccatctccgtccatctc 121 ||||||||||||||||||||||||||||||||| Sbjct: 57 gcgctgatcccctccgccatctccgtccatctc 89 >gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 238 bits (120), Expect = 3e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 169 ggcggcggcggaggcgcgggagggagggagcaggaacggttcctgccgatcgccaacatc 228 |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 136598 ggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatc 136657 Query: 229 gggcgcgtcatgcggcggggcgtgccggagaacgggaaaatcgccaaggacgccaaggag 288 || ||| ||||||| |||| ||||||||||||||| || |||||||||||| |||||||| Sbjct: 136658 ggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggag 136717 Query: 289 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgag 336 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136718 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgag 136765 Score = 141 bits (71), Expect = 6e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 343 gacaagtgcatgaaggagaagcggaagaccatcaacggggacgacctgatctggtccatg 402 ||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 136928 gacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatg 136987 Query: 403 ggtacgctcggcttcgaggactacgtcgagccccttaagctgtacctcaagctcttccgg 462 || |||||||| ||||||||||| |||||||| || ||||| ||||||| ||||| |||| Sbjct: 136988 ggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgg 137047 Query: 463 gag 465 ||| Sbjct: 137048 gag 137050 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/93 (87%), Gaps = 8/93 (8%) Strand = Plus / Plus Query: 29 agatccggcggccggtcgcgtcctcctcccgctcccacgtcccacccaccccaaccaacg 88 |||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| Sbjct: 136381 agatccggcggccggtggcgtcctcctccctctccctcctccc--------caaccaacg 136432 Query: 89 gcgctgatcccctccgccatctccgtccatctc 121 ||||||||||||||||||||||||||||||||| Sbjct: 136433 gcgctgatcccctccgccatctccgtccatctc 136465 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 238 bits (120), Expect = 3e-59 Identities = 156/168 (92%) Strand = Plus / Plus Query: 169 ggcggcggcggaggcgcgggagggagggagcaggaacggttcctgccgatcgccaacatc 228 |||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 28352356 ggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatc 28352415 Query: 229 gggcgcgtcatgcggcggggcgtgccggagaacgggaaaatcgccaaggacgccaaggag 288 || ||| ||||||| |||| ||||||||||||||| || |||||||||||| |||||||| Sbjct: 28352416 ggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggag 28352475 Query: 289 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgag 336 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28352476 tccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgag 28352523 Score = 141 bits (71), Expect = 6e-30 Identities = 110/123 (89%) Strand = Plus / Plus Query: 343 gacaagtgcatgaaggagaagcggaagaccatcaacggggacgacctgatctggtccatg 402 ||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 28352686 gacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatg 28352745 Query: 403 ggtacgctcggcttcgaggactacgtcgagccccttaagctgtacctcaagctcttccgg 462 || |||||||| ||||||||||| |||||||| || ||||| ||||||| ||||| |||| Sbjct: 28352746 ggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgg 28352805 Query: 463 gag 465 ||| Sbjct: 28352806 gag 28352808 Score = 121 bits (61), Expect = 5e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 192 gagggagcaggaacggttcctgccgatcgccaacatcgggcgcgtcatgcggcggggcgt 251 |||||||||||| ||||||| || |||||||||||| | ||| ||||| | || | | Sbjct: 22628476 gagggagcaggacaggttcctccccatcgccaacatcagccgcatcatgaagaaggccat 22628417 Query: 252 gccggagaacgggaaaatcgccaaggacgccaaggagtccgtccaggagtgcgtctccga 311 |||| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 22628416 cccggccaacgggaagatcgccaaggacgccaaggagaccgtgcaggagtgcgtctccga 22628357 Query: 312 gttcatcagcttcatcaccagcgag 336 ||||||| |||||||||||||||| Sbjct: 22628356 gttcatctccttcatcaccagcgag 22628332 Score = 95.6 bits (48), Expect = 3e-16 Identities = 81/93 (87%), Gaps = 8/93 (8%) Strand = Plus / Plus Query: 29 agatccggcggccggtcgcgtcctcctcccgctcccacgtcccacccaccccaaccaacg 88 |||||||||||||||| ||||||||||||| ||||| | |||| ||||||||| Sbjct: 28352139 agatccggcggccggtggcgtcctcctccctctccctcctccc--------caaccaacg 28352190 Query: 89 gcgctgatcccctccgccatctccgtccatctc 121 ||||||||||||||||||||||||||||||||| Sbjct: 28352191 gcgctgatcccctccgccatctccgtccatctc 28352223