BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004h10 (855 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 224 5e-55 dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 224 5e-55 dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic D... 224 5e-55 ref|NM_001052678.1| Oryza sativa (japonica cultivar-group) Os02g... 210 7e-51 emb|CT829864.1| Oryza sativa (indica cultivar-group) cDNA clone:... 196 1e-46 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 224 bits (113), Expect = 5e-55 Identities = 243/283 (85%), Gaps = 15/283 (5%) Strand = Plus / Minus Query: 566 cggtggttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 625 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958909 cggtcgttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 4958850 Query: 626 gacacgaacccccccatctatgttgttgttgttgtttacttgatctgatgatgattaata 685 |||| || || || || ||| |||||| |||||||||||||||||||||||||||| Sbjct: 4958849 gacatgatccttccgcgctttgt-gttgttcttgtttacttgatctgatgatgattaatg 4958791 Query: 686 tggcctgatctacgcatctgcctgcttgcctgcttgttgccggtgatggtgatgatgatt 745 ||||| ||||| || |||| ||||||||| ||| || ||| | ||||||||| Sbjct: 4958790 tggcccgatctgcgtatct--------gcctgcttgctgctggcgatag--atgatgatt 4958741 Query: 746 gccgagtcccgcggcagctcgctgcggttgtgctgt---aatatagcaacattttacttg 802 || | ||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 4958740 gctgcgtctcgcagcagctcgctgtggttgtgctgttgtaatatagcaacattttacttg 4958681 Query: 803 cttcct-cttgtgaggaaacagacagctaaagtaacttatttt 844 |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 4958680 cttccttcctgtgaggaagcagacagctaaagtaacttatttt 4958638 Score = 210 bits (106), Expect = 7e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 144 ggttccgcggggtacggaagcggccgtgggggcgctacgcggcggagatccgcgacccgg 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 4959480 ggttccgcggggtgcggaagcggccgtgggggaggtacgcggcggagatccgcgacccgg 4959421 Query: 204 ctaagaaggcgcgagtctggctcggcacctttgactccgccgaggacgctgcccgcgcct 263 | ||||||||||| || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 4959420 cgaagaaggcgcgggtgtggctggggacctacgactccgccgaggacgccgcgcgcgcct 4959361 Query: 264 acgacgccgccgcccgcgcgctgcgcgggcccaaggccaagaccaacttccccc 317 ||||||| || || || |||||||||||| |||||||||||||||||||||||| Sbjct: 4959360 acgacgcggcggcgcgggcgctgcgcggggccaaggccaagaccaacttccccc 4959307 Score = 196 bits (99), Expect = 1e-46 Identities = 123/131 (93%) Strand = Plus / Minus Query: 342 ccgccgccgatccccgacggcgactgccgcagcgactgcgggtcctcggcctcggtggtg 401 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 4959139 ccgccgccgatccccgacggtgactgccgcagcgactgcgggtcgtcggcgtcggtggtg 4959080 Query: 402 gacgacgactgcacggacgccgccgcctcgccgtcctgccggctcccgctcccgttcgac 461 |||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||| Sbjct: 4959079 gacgacgactgcgcggacgccgccgcctcgccctcgtgccggctcccgttccagttcgac 4959020 Query: 462 ctcaacctgcc 472 ||||||||||| Sbjct: 4959019 ctcaacctgcc 4959009 Score = 99.6 bits (50), Expect = 2e-17 Identities = 98/114 (85%) Strand = Plus / Minus Query: 163 gcggccgtgggggcgctacgcggcggagatccgcgacccggctaagaaggcgcgagtctg 222 |||||||| |||| | |||||||| |||||||| |||||||| |||||| | | |||| Sbjct: 3164979 gcggccgtcggggaggtacgcggccgagatccgggacccggcgaagaagaccccgatctg 3164920 Query: 223 gctcggcacctttgactccgccgaggacgctgcccgcgcctacgacgccgccgc 276 ||||||||| || |||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 3164919 gctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgc 3164866 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 516 gacgacgaggagctgaggctgacggcgctgcggctctga 554 ||||||||||||||||||||||||||||||||||||||| Sbjct: 4958962 gacgacgaggagctgaggctgacggcgctgcggctctga 4958924 >dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 224 bits (113), Expect = 5e-55 Identities = 243/283 (85%), Gaps = 15/283 (5%) Strand = Plus / Minus Query: 566 cggtggttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 625 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30035 cggtcgttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 29976 Query: 626 gacacgaacccccccatctatgttgttgttgttgtttacttgatctgatgatgattaata 685 |||| || || || || ||| |||||| |||||||||||||||||||||||||||| Sbjct: 29975 gacatgatccttccgcgctttgt-gttgttcttgtttacttgatctgatgatgattaatg 29917 Query: 686 tggcctgatctacgcatctgcctgcttgcctgcttgttgccggtgatggtgatgatgatt 745 ||||| ||||| || |||| ||||||||| ||| || ||| | ||||||||| Sbjct: 29916 tggcccgatctgcgtatct--------gcctgcttgctgctggcgatag--atgatgatt 29867 Query: 746 gccgagtcccgcggcagctcgctgcggttgtgctgt---aatatagcaacattttacttg 802 || | ||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 29866 gctgcgtctcgcagcagctcgctgtggttgtgctgttgtaatatagcaacattttacttg 29807 Query: 803 cttcct-cttgtgaggaaacagacagctaaagtaacttatttt 844 |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 29806 cttccttcctgtgaggaagcagacagctaaagtaacttatttt 29764 Score = 210 bits (106), Expect = 7e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 144 ggttccgcggggtacggaagcggccgtgggggcgctacgcggcggagatccgcgacccgg 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 30606 ggttccgcggggtgcggaagcggccgtgggggaggtacgcggcggagatccgcgacccgg 30547 Query: 204 ctaagaaggcgcgagtctggctcggcacctttgactccgccgaggacgctgcccgcgcct 263 | ||||||||||| || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 30546 cgaagaaggcgcgggtgtggctggggacctacgactccgccgaggacgccgcgcgcgcct 30487 Query: 264 acgacgccgccgcccgcgcgctgcgcgggcccaaggccaagaccaacttccccc 317 ||||||| || || || |||||||||||| |||||||||||||||||||||||| Sbjct: 30486 acgacgcggcggcgcgggcgctgcgcggggccaaggccaagaccaacttccccc 30433 Score = 196 bits (99), Expect = 1e-46 Identities = 123/131 (93%) Strand = Plus / Minus Query: 342 ccgccgccgatccccgacggcgactgccgcagcgactgcgggtcctcggcctcggtggtg 401 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 30265 ccgccgccgatccccgacggtgactgccgcagcgactgcgggtcgtcggcgtcggtggtg 30206 Query: 402 gacgacgactgcacggacgccgccgcctcgccgtcctgccggctcccgctcccgttcgac 461 |||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||| Sbjct: 30205 gacgacgactgcgcggacgccgccgcctcgccctcgtgccggctcccgttccagttcgac 30146 Query: 462 ctcaacctgcc 472 ||||||||||| Sbjct: 30145 ctcaacctgcc 30135 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 516 gacgacgaggagctgaggctgacggcgctgcggctctga 554 ||||||||||||||||||||||||||||||||||||||| Sbjct: 30088 gacgacgaggagctgaggctgacggcgctgcggctctga 30050 >dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 224 bits (113), Expect = 5e-55 Identities = 243/283 (85%), Gaps = 15/283 (5%) Strand = Plus / Minus Query: 566 cggtggttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 625 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103648 cggtcgttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 103589 Query: 626 gacacgaacccccccatctatgttgttgttgttgtttacttgatctgatgatgattaata 685 |||| || || || || ||| |||||| |||||||||||||||||||||||||||| Sbjct: 103588 gacatgatccttccgcgctttgt-gttgttcttgtttacttgatctgatgatgattaatg 103530 Query: 686 tggcctgatctacgcatctgcctgcttgcctgcttgttgccggtgatggtgatgatgatt 745 ||||| ||||| || |||| ||||||||| ||| || ||| | ||||||||| Sbjct: 103529 tggcccgatctgcgtatct--------gcctgcttgctgctggcgatag--atgatgatt 103480 Query: 746 gccgagtcccgcggcagctcgctgcggttgtgctgt---aatatagcaacattttacttg 802 || | ||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 103479 gctgcgtctcgcagcagctcgctgtggttgtgctgttgtaatatagcaacattttacttg 103420 Query: 803 cttcct-cttgtgaggaaacagacagctaaagtaacttatttt 844 |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 103419 cttccttcctgtgaggaagcagacagctaaagtaacttatttt 103377 Score = 210 bits (106), Expect = 7e-51 Identities = 157/174 (90%) Strand = Plus / Minus Query: 144 ggttccgcggggtacggaagcggccgtgggggcgctacgcggcggagatccgcgacccgg 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 104219 ggttccgcggggtgcggaagcggccgtgggggaggtacgcggcggagatccgcgacccgg 104160 Query: 204 ctaagaaggcgcgagtctggctcggcacctttgactccgccgaggacgctgcccgcgcct 263 | ||||||||||| || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 104159 cgaagaaggcgcgggtgtggctggggacctacgactccgccgaggacgccgcgcgcgcct 104100 Query: 264 acgacgccgccgcccgcgcgctgcgcgggcccaaggccaagaccaacttccccc 317 ||||||| || || || |||||||||||| |||||||||||||||||||||||| Sbjct: 104099 acgacgcggcggcgcgggcgctgcgcggggccaaggccaagaccaacttccccc 104046 Score = 196 bits (99), Expect = 1e-46 Identities = 123/131 (93%) Strand = Plus / Minus Query: 342 ccgccgccgatccccgacggcgactgccgcagcgactgcgggtcctcggcctcggtggtg 401 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 103878 ccgccgccgatccccgacggtgactgccgcagcgactgcgggtcgtcggcgtcggtggtg 103819 Query: 402 gacgacgactgcacggacgccgccgcctcgccgtcctgccggctcccgctcccgttcgac 461 |||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||| Sbjct: 103818 gacgacgactgcgcggacgccgccgcctcgccctcgtgccggctcccgttccagttcgac 103759 Query: 462 ctcaacctgcc 472 ||||||||||| Sbjct: 103758 ctcaacctgcc 103748 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 516 gacgacgaggagctgaggctgacggcgctgcggctctga 554 ||||||||||||||||||||||||||||||||||||||| Sbjct: 103701 gacgacgaggagctgaggctgacggcgctgcggctctga 103663 >ref|NM_001052678.1| Oryza sativa (japonica cultivar-group) Os02g0189600 (Os02g0189600) mRNA, complete cds Length = 600 Score = 210 bits (106), Expect = 7e-51 Identities = 157/174 (90%) Strand = Plus / Plus Query: 144 ggttccgcggggtacggaagcggccgtgggggcgctacgcggcggagatccgcgacccgg 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 44 ggttccgcggggtgcggaagcggccgtgggggaggtacgcggcggagatccgcgacccgg 103 Query: 204 ctaagaaggcgcgagtctggctcggcacctttgactccgccgaggacgctgcccgcgcct 263 | ||||||||||| || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 104 cgaagaaggcgcgggtgtggctggggacctacgactccgccgaggacgccgcgcgcgcct 163 Query: 264 acgacgccgccgcccgcgcgctgcgcgggcccaaggccaagaccaacttccccc 317 ||||||| || || || |||||||||||| |||||||||||||||||||||||| Sbjct: 164 acgacgcggcggcgcgggcgctgcgcggggccaaggccaagaccaacttccccc 217 Score = 196 bits (99), Expect = 1e-46 Identities = 123/131 (93%) Strand = Plus / Plus Query: 342 ccgccgccgatccccgacggcgactgccgcagcgactgcgggtcctcggcctcggtggtg 401 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 385 ccgccgccgatccccgacggtgactgccgcagcgactgcgggtcgtcggcgtcggtggtg 444 Query: 402 gacgacgactgcacggacgccgccgcctcgccgtcctgccggctcccgctcccgttcgac 461 |||||||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||| Sbjct: 445 gacgacgactgcgcggacgccgccgcctcgccctcgtgccggctcccgttccagttcgac 504 Query: 462 ctcaacctgcc 472 ||||||||||| Sbjct: 505 ctcaacctgcc 515 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 516 gacgacgaggagctgaggctgacggcgctgcggctctga 554 ||||||||||||||||||||||||||||||||||||||| Sbjct: 562 gacgacgaggagctgaggctgacggcgctgcggctctga 600 >emb|CT829864.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126M08, full insert sequence Length = 1311 Score = 196 bits (99), Expect = 1e-46 Identities = 157/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 144 ggttccgcggggtacggaagcggccgtgggggcgctacgcggcggagatccgcgacccgg 203 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 180 ggttccgcggggtgcggaagcggccgtgggggaggtacgcggcggagatccgcgacccgg 239 Query: 204 ctaagaaggcgcgagtctggctcggcacctttgactccgccgaggacgctgcccgcgcct 263 | ||||||||||| || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 240 cgaagaaggcgcgggtgtggctggggacctacgactccgccgaggacgccgcgcgcgcct 299 Query: 264 acgacgccgccgcccgcgcgctgcgcgggcccaaggccaa-gaccaacttccccc 317 ||||||| || || || |||||||||||| |||||||||| |||||||||||||| Sbjct: 300 acgacgcggcggcgcgggcgctgcgcggggccaaggccaatgaccaacttccccc 354 Score = 180 bits (91), Expect = 6e-42 Identities = 121/131 (92%) Strand = Plus / Plus Query: 342 ccgccgccgatccccgacggcgactgccgcagcgactgcgggtcctcggcctcggtggtg 401 |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 522 ccgccgccgatccccgacggtgactgccgcagcgactgcgggtcatcggcgtcggtggtg 581 Query: 402 gacgacgactgcacggacgccgccgcctcgccgtcctgccggctcccgctcccgttcgac 461 ||||||||||| |||| |||||||||||||| || |||||||||| | ||||||||||| Sbjct: 582 gacgacgactgagcggaagccgccgcctcgccctcgtgccggctccagttcccgttcgac 641 Query: 462 ctcaacctgcc 472 ||||||||||| Sbjct: 642 ctcaacctgcc 652 Score = 168 bits (85), Expect = 2e-38 Identities = 134/149 (89%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 566 cggtggttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 625 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 cggtcgttggagaaagaggaaaaggagaaaaatatttggttcttcccttctctcgtagcc 811 Query: 626 gacacgaacccccccatctatgttgttgttgttgtttacttgatctgatgatgattaata 685 |||| || || || || || ||||||| |||||||||||||||||||||||||||| Sbjct: 812 gacatgatccttccgcgctttg-tgttgttcttgtttacttgatctgatgatgattaatg 870 Query: 686 tggcctgatctacgcatctgcctgcttgc 714 ||||| ||||| || |||||||||||||| Sbjct: 871 tggcccgatctgcgtatctgcctgcttgc 899 Score = 125 bits (63), Expect = 3e-25 Identities = 102/113 (90%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 736 gatgatgattgccgagtcccgcggcagctcgctgcggttgtgctgt---aatatagcaac 792 |||||||||||| | ||| ||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 908 gatgatgattgctgcgtctcgcagcagctcgctgtggttgtgctgttgtaatatagcaac 967 Query: 793 attttacttgcttcc-tcttgtgaggaaacagacagctaaagtaacttatttt 844 ||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 968 attttacttgcttccttcctgtgaggaagcagacagctaaagtaacttatttt 1020 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 516 gacgacgaggagctgaggctgacggcgctgcggctctga 554 ||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gacgacgaggagctgaggctgacggcgctgcggctctga 737