BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004h02 (820 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT833548.1| Oryza sativa (indica cultivar-group) cDNA clone:... 426 e-116 ref|NM_001056810.1| Oryza sativa (japonica cultivar-group) Os03g... 426 e-116 dbj|AK120174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116 dbj|AB025187.1| Oryza sativa (japonica cultivar-group) mRNA for ... 426 e-116 gb|AY103760.1| Zea mays PCO110275 mRNA sequence 319 1e-83 >emb|CT833548.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA020G08, full insert sequence Length = 834 Score = 426 bits (215), Expect = e-116 Identities = 274/293 (93%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 257 acaccaaccctgcaacagaggaaacaagtgagacagctggggaggaagaggctgaggaga 316 ||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 309 acaccaaccctgctgcagaggaaacaactgagactgctg---aggaagaggctgaggaga 365 Query: 317 aaccagagattaagattgaaacagctccagcagactttcgtttcccaacaacaaatcaaa 376 |||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 366 aaccagagattaagatcgaaacagctccagcagatttccgtttcccgacaacaaatcaaa 425 Query: 377 caaggcactgtttcacacgctatgttgagtatcacaggtgtgtagctgcgaaaggagagg 436 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 426 caaggcactgtttcacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggagg 485 Query: 437 gtgctcctgagtgcgataagtttgcaaagtactatcgatctctttgccctggtgaatggg 496 |||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||| Sbjct: 486 atgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatggg 545 Query: 497 ttgagcgttggaacgagcaacgggaaaacggcaccttccctggacctctgtaa 549 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaa 598 Score = 99.6 bits (50), Expect = 2e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 44 ccatggccgccgaagccaaggccccgtccctcgccgaggaatattcacttccaccacagg 103 |||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| Sbjct: 87 ccatggccgccgaagccaaggccccgtcgctcgccgaggagtactcacttcctccacagg 146 Query: 104 aggttccagtggaaaaagcagctgaggagaagcc 137 | | ||||| ||||| |||| |||||| ||||| Sbjct: 147 aagccccagttgaaaaggcagttgaggataagcc 180 >ref|NM_001056810.1| Oryza sativa (japonica cultivar-group) Os03g0390400 (Os03g0390400) mRNA, complete cds Length = 930 Score = 426 bits (215), Expect = e-116 Identities = 274/293 (93%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 257 acaccaaccctgcaacagaggaaacaagtgagacagctggggaggaagaggctgaggaga 316 |||||||||||||| |||||||||| | |||||| |||| |||||||||||||||||| Sbjct: 327 acaccaaccctgcagcagaggaaacgaatgagactgctg---aggaagaggctgaggaga 383 Query: 317 aaccagagattaagattgaaacagctccagcagactttcgtttcccaacaacaaatcaaa 376 |||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 384 aaccagagattaagatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaa 443 Query: 377 caaggcactgtttcacacgctatgttgagtatcacaggtgtgtagctgcgaaaggagagg 436 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 444 caaggcactgtttcacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggagg 503 Query: 437 gtgctcctgagtgcgataagtttgcaaagtactatcgatctctttgccctggtgaatggg 496 |||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||| Sbjct: 504 atgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatggg 563 Query: 497 ttgagcgttggaacgagcaacgggaaaacggcaccttccctggacctctgtaa 549 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaa 616 Score = 107 bits (54), Expect = 7e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 44 ccatggccgccgaagccaaggccccgtccctcgccgaggaatattcacttccaccacagg 103 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 105 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 164 Query: 104 aggttccagtggaaaaagcagctgaggagaagcc 137 | | ||||| ||||| |||| |||||| ||||| Sbjct: 165 aagccccagttgaaaaggcagttgaggataagcc 198 >dbj|AK120174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A17, full insert sequence Length = 887 Score = 426 bits (215), Expect = e-116 Identities = 274/293 (93%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 257 acaccaaccctgcaacagaggaaacaagtgagacagctggggaggaagaggctgaggaga 316 |||||||||||||| |||||||||| | |||||| |||| |||||||||||||||||| Sbjct: 317 acaccaaccctgcagcagaggaaacgaatgagactgctg---aggaagaggctgaggaga 373 Query: 317 aaccagagattaagattgaaacagctccagcagactttcgtttcccaacaacaaatcaaa 376 |||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 374 aaccagagattaagatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaa 433 Query: 377 caaggcactgtttcacacgctatgttgagtatcacaggtgtgtagctgcgaaaggagagg 436 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 434 caaggcactgtttcacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggagg 493 Query: 437 gtgctcctgagtgcgataagtttgcaaagtactatcgatctctttgccctggtgaatggg 496 |||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||| Sbjct: 494 atgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatggg 553 Query: 497 ttgagcgttggaacgagcaacgggaaaacggcaccttccctggacctctgtaa 549 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 554 ttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaa 606 Score = 107 bits (54), Expect = 7e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 44 ccatggccgccgaagccaaggccccgtccctcgccgaggaatattcacttccaccacagg 103 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 95 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 154 Query: 104 aggttccagtggaaaaagcagctgaggagaagcc 137 | | ||||| ||||| |||| |||||| ||||| Sbjct: 155 aagccccagttgaaaaggcagttgaggataagcc 188 >dbj|AB025187.1| Oryza sativa (japonica cultivar-group) mRNA for cytochrome c oxidase subunit 6b-1, complete cds Length = 951 Score = 426 bits (215), Expect = e-116 Identities = 274/293 (93%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 257 acaccaaccctgcaacagaggaaacaagtgagacagctggggaggaagaggctgaggaga 316 |||||||||||||| |||||||||| | |||||| |||| |||||||||||||||||| Sbjct: 327 acaccaaccctgcagcagaggaaacgaatgagactgctg---aggaagaggctgaggaga 383 Query: 317 aaccagagattaagattgaaacagctccagcagactttcgtttcccaacaacaaatcaaa 376 |||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 384 aaccagagattaagatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaa 443 Query: 377 caaggcactgtttcacacgctatgttgagtatcacaggtgtgtagctgcgaaaggagagg 436 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 444 caaggcactgtttcacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggagg 503 Query: 437 gtgctcctgagtgcgataagtttgcaaagtactatcgatctctttgccctggtgaatggg 496 |||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||| Sbjct: 504 atgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatggg 563 Query: 497 ttgagcgttggaacgagcaacgggaaaacggcaccttccctggacctctgtaa 549 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaa 616 Score = 107 bits (54), Expect = 7e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 44 ccatggccgccgaagccaaggccccgtccctcgccgaggaatattcacttccaccacagg 103 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 105 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 164 Query: 104 aggttccagtggaaaaagcagctgaggagaagcc 137 | | ||||| ||||| |||| |||||| ||||| Sbjct: 165 aagccccagttgaaaaggcagttgaggataagcc 198 >gb|AY103760.1| Zea mays PCO110275 mRNA sequence Length = 2705 Score = 319 bits (161), Expect = 1e-83 Identities = 250/279 (89%), Gaps = 3/279 (1%) Strand = Plus / Plus Query: 272 cagaggaaacaagtgagacagctggggaggaagaggctgaggagaaaccagagattaaga 331 |||||||| |||||||||| || | |||||||||||||||| ||||| ||||| |||| Sbjct: 2182 cagaggaagcaagtgagactgccgaggaggaagaggctgag---aaacctgagatcaaga 2238 Query: 332 ttgaaacagctccagcagactttcgtttcccaacaacaaatcaaacaaggcactgtttca 391 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2239 ttgaaacagctccagcagattttcgtttcccaacaacaaatcaaacgaggcattgtttca 2298 Query: 392 cacgctatgttgagtatcacaggtgtgtagctgcgaaaggagagggtgctcctgagtgcg 451 ||||||||||||| || ||||||||||| ||||| ||||| |||| ||| |||||||| | Sbjct: 2299 cacgctatgttgaataccacaggtgtgtggctgcaaaaggtgaggatgcacctgagtgtg 2358 Query: 452 ataagtttgcaaagtactatcgatctctttgccctggtgaatgggttgagcgttggaacg 511 |||||||||| |||||||||||||| || ||||| |||||||||||||| || ||||||| Sbjct: 2359 ataagtttgccaagtactatcgatccctgtgcccaggtgaatgggttgaacgctggaacg 2418 Query: 512 agcaacgggaaaacggcaccttccctggacctctgtaat 550 |||| || ||||| ||||||||||||||||||||||||| Sbjct: 2419 agcagcgtgaaaatggcaccttccctggacctctgtaat 2457 Score = 165 bits (83), Expect = 3e-37 Identities = 125/139 (89%) Strand = Plus / Plus Query: 44 ccatggccgccgaagccaaggccccgtccctcgccgaggaatattcacttccaccacagg 103 |||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 1954 ccatggccgcggaagccaagacgccgtccctcgctgaggaatattcacttccaccacagg 2013 Query: 104 aggttccagtggaaaaagcagctgaggagaagcctgctattggcactgagactgaagctg 163 | |||||||||||||| ||||||||||||||||| ||| ||| |||||||||||| ||| Sbjct: 2014 aagttccagtggaaaaggcagctgaggagaagccctctagtggtactgagactgaatctg 2073 Query: 164 cccctgcaacaaatgatga 182 | ||| |||| |||||||| Sbjct: 2074 ctccttcaaccaatgatga 2092