BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst004c24 (845 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g... 517 e-143 dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 517 e-143 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 198 3e-47 emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:... 155 3e-34 >ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g0605400 (Os12g0605400) mRNA, complete cds Length = 923 Score = 517 bits (261), Expect = e-143 Identities = 408/457 (89%) Strand = Plus / Plus Query: 193 gctggaatgacgtcgagtggagatccatcgggagttgtcgtgcctaggaacttcagactg 252 ||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 195 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 254 Query: 253 ctagaagagcttgagagaggagagaagggcattggggatggaacagttagctacggaatg 312 |||||||||||||||||||| ||||||||||| || |||||| |||| ||||| |||||| Sbjct: 255 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 314 Query: 313 gatgacgcagatgatatctacatgcgctcttggacaggaacaataatcggtccacacaac 372 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||| || ||| Sbjct: 315 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataac 374 Query: 373 accgtccacgagggccgaatttatcagttaaagcttttctgcgacaaggattatccagac 432 || ||||| |||||||| || || || | |||||||||||||||||||| || |||||| Sbjct: 375 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 434 Query: 433 cggccaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatcctgagact 492 ||||||||||||| | |||||||||||||||||| ||||| |||||||| || |||| | Sbjct: 435 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaat 494 Query: 493 ggagtggtcgaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatg 552 ||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 495 ggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatg 554 Query: 553 gagagtatcttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtg 612 ||| ||||||||| || ||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 555 gaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtg 614 Query: 613 cagcctccagaggggacattcttctaaaagcatgcgc 649 |||||||||||||||||||||||||| ||||| |||| Sbjct: 615 cagcctccagaggggacattcttctagaagcaggcgc 651 >dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 517 bits (261), Expect = e-143 Identities = 408/457 (89%) Strand = Plus / Plus Query: 193 gctggaatgacgtcgagtggagatccatcgggagttgtcgtgcctaggaacttcagactg 252 ||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 196 gctgggatggcgtcgagtggagatccatcggcagtcgtcgtgcctaggaacttcagactg 255 Query: 253 ctagaagagcttgagagaggagagaagggcattggggatggaacagttagctacggaatg 312 |||||||||||||||||||| ||||||||||| || |||||| |||| ||||| |||||| Sbjct: 256 ctagaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatg 315 Query: 313 gatgacgcagatgatatctacatgcgctcttggacaggaacaataatcggtccacacaac 372 ||||| ||||| |||||||||||||||||||||||||| ||||| || ||||| || ||| Sbjct: 316 gatgatgcagacgatatctacatgcgctcttggacaggcacaattattggtccccataac 375 Query: 373 accgtccacgagggccgaatttatcagttaaagcttttctgcgacaaggattatccagac 432 || ||||| |||||||| || || || | |||||||||||||||||||| || |||||| Sbjct: 376 actgtccatgagggccggatataccaactgaagcttttctgcgacaaggactacccagac 435 Query: 433 cggccaccaactgttagatttcactcaagaatcaatatgacttgtgtaaatcctgagact 492 ||||||||||||| | |||||||||||||||||| ||||| |||||||| || |||| | Sbjct: 436 aggccaccaactgtaaaatttcactcaagaatcaacatgacctgtgtaaacccagagaat 495 Query: 493 ggagtggtcgaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatg 552 ||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 496 ggattggttgaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatg 555 Query: 553 gagagtatcttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtg 612 ||| ||||||||| || ||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 556 gaggctatcttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtg 615 Query: 613 cagcctccagaggggacattcttctaaaagcatgcgc 649 |||||||||||||||||||||||||| ||||| |||| Sbjct: 616 cagcctccagaggggacattcttctagaagcaggcgc 652 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 198 bits (100), Expect = 3e-47 Identities = 136/148 (91%) Strand = Plus / Minus Query: 502 gaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggagagtatc 561 |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25592889 gaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatc 25592830 Query: 562 ttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtgcagcctcca 621 ||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 25592829 ttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctcca 25592770 Query: 622 gaggggacattcttctaaaagcatgcgc 649 ||||||||||||||||| ||||| |||| Sbjct: 25592769 gaggggacattcttctagaagcaggcgc 25592742 Score = 178 bits (90), Expect = 2e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 232 gtgcctaggaacttcagactgctagaagagcttgagagaggagagaagggcattggggat 291 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 25593373 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 25593314 Query: 292 ggaacagttagctacggaatggatgacgcagatgatatctacatgcgctcttggacagga 351 ||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 25593313 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 25593254 Query: 352 acaataatcggtcc 365 ||||| || ||||| Sbjct: 25593253 acaattattggtcc 25593240 Score = 107 bits (54), Expect = 7e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 403 aagcttttctgcgacaaggattatccagaccggccaccaactgttagatttcactcaaga 462 |||||||||||||||||||| || |||||| ||||||||||||| | ||||||||||||| Sbjct: 25593079 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 25593020 Query: 463 atcaatatgacttgtgtaaatcctgagactggagtggt 500 ||||| ||||| |||||||| || |||| |||| |||| Sbjct: 25593019 atcaacatgacctgtgtaaacccagagaatggattggt 25592982 >emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 198 bits (100), Expect = 3e-47 Identities = 136/148 (91%) Strand = Plus / Plus Query: 502 gaccaaaggaagtttggcctgttgtcaaattggcgccgtgagtacacaatggagagtatc 561 |||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 80829 gaccaaaggaagttcagcctgttgtcaaattggcgccgcgagtacacaatggaggctatc 80888 Query: 562 ttgacgcagcttaagaaagaaatggcaacatcacacaaccggaaattagtgcagcctcca 621 ||||| || ||||||||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 80889 ttgacccaacttaagaaagagatggcagcatcacacaaccggaaactagtgcagcctcca 80948 Query: 622 gaggggacattcttctaaaagcatgcgc 649 ||||||||||||||||| ||||| |||| Sbjct: 80949 gaggggacattcttctagaagcaggcgc 80976 Score = 178 bits (90), Expect = 2e-41 Identities = 123/134 (91%) Strand = Plus / Plus Query: 232 gtgcctaggaacttcagactgctagaagagcttgagagaggagagaagggcattggggat 291 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 80345 gtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatcggtgat 80404 Query: 292 ggaacagttagctacggaatggatgacgcagatgatatctacatgcgctcttggacagga 351 ||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 80405 ggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttggacaggc 80464 Query: 352 acaataatcggtcc 365 ||||| || ||||| Sbjct: 80465 acaattattggtcc 80478 Score = 107 bits (54), Expect = 7e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 403 aagcttttctgcgacaaggattatccagaccggccaccaactgttagatttcactcaaga 462 |||||||||||||||||||| || |||||| ||||||||||||| | ||||||||||||| Sbjct: 80639 aagcttttctgcgacaaggactacccagacaggccaccaactgtaaaatttcactcaaga 80698 Query: 463 atcaatatgacttgtgtaaatcctgagactggagtggt 500 ||||| ||||| |||||||| || |||| |||| |||| Sbjct: 80699 atcaacatgacctgtgtaaacccagagaatggattggt 80736 >emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051B14, full insert sequence Length = 852 Score = 155 bits (78), Expect = 3e-34 Identities = 318/398 (79%) Strand = Plus / Plus Query: 241 aacttcagactgctagaagagcttgagagaggagagaagggcattggggatggaacagtt 300 |||||||| |||||||||||||||| | || || ||||||||||| |||||||| || Sbjct: 155 aacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtg 214 Query: 301 agctacggaatggatgacgcagatgatatctacatgcgctcttggacaggaacaataatc 360 ||||| ||||||||||| |||||||| ||||||||||| |||||||| || || || || Sbjct: 215 agctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcatt 274 Query: 361 ggtccacacaacaccgtccacgagggccgaatttatcagttaaagcttttctgcgacaag 420 |||||||| || | ||||| || || || || || ||| | ||||| ||||| |||||| Sbjct: 275 ggtccacataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaag 334 Query: 421 gattatccagaccggccaccaactgttagatttcactcaagaatcaatatgacttgtgta 480 || || ||||| ||||||| |||| | ||||| ||||||||||||||| | ||||| Sbjct: 335 gactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgtt 394 Query: 481 aatcctgagactggagtggtcgaccaaaggaagtttggcctgttgtcaaattggcgccgt 540 |||| ||||||||||| ||| ||| ||||||||||| | || |||| |||| || Sbjct: 395 aatcatgagactggagcggttgactcgaggaagtttggtgttttagcaaactggcagcgc 454 Query: 541 gagtacacaatggagagtatcttgacgcagcttaagaaagaaatggcaacatcacacaac 600 |||||||| ||||||| |||| | || ||||| ||||| || |||||||| | || || Sbjct: 455 gagtacaccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaat 514 Query: 601 cggaaattagtgcagcctccagaggggacattcttcta 638 || || || ||||| |||||||| ||||| |||||||| Sbjct: 515 cgcaagttggtgcaacctccagaagggacgttcttcta 552