BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003m08 (789 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051715.1| Oryza sativa (japonica cultivar-group) Os01g... 392 e-106 dbj|AK063138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106 emb|CT829880.1| Oryza sativa (indica cultivar-group) cDNA clone:... 379 e-101 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 234 4e-58 dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 234 4e-58 >ref|NM_001051715.1| Oryza sativa (japonica cultivar-group) Os01g0914400 (Os01g0914400) mRNA, complete cds Length = 699 Score = 392 bits (198), Expect = e-106 Identities = 392/455 (86%), Gaps = 5/455 (1%) Strand = Plus / Plus Query: 77 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 136 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 13 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 68 Query: 137 ggccaatggttgccccacaactacctcaaactccctgctcctcttcttcctcctctcttg 196 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 69 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 128 Query: 197 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcaggtgcaga 256 |||||| || ||||||||| |||||| |||| |||||||| |||||||||||| |||| Sbjct: 129 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacaga 188 Query: 257 ttatggagaacaatatcccggccaacgactacctggagaacataaagatttgcaagagaa 316 ||||||||||||||||| |||| | |||||| |||||||| | ||||||| ||||| Sbjct: 189 ctatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaa 248 Query: 317 cgcgaagggtctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttc 376 | |||| |||||||||||||| |||||||| | |||||||||||| |||||||||| Sbjct: 249 catcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttc 308 Query: 377 gaccgctccaatatgtacgtacaacgagtgcagggggtgccgattcaggtgtactgctga 436 ||| ||||||||||| || |||||||||||||| ||||| ||||||| ||||||||| || Sbjct: 309 gactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccga 368 Query: 437 gcaagtcccggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttg 496 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 369 gcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttg 428 Query: 497 ccacaggtgat-tttaataattaggaggagcttct 530 ||||||||||| |||||||||| ||||||||||| Sbjct: 429 ccacaggtgatcattaataattaagaggagcttct 463 >dbj|AK063138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-G05, full insert sequence Length = 699 Score = 392 bits (198), Expect = e-106 Identities = 392/455 (86%), Gaps = 5/455 (1%) Strand = Plus / Plus Query: 77 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 136 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 13 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 68 Query: 137 ggccaatggttgccccacaactacctcaaactccctgctcctcttcttcctcctctcttg 196 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 69 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 128 Query: 197 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcaggtgcaga 256 |||||| || ||||||||| |||||| |||| |||||||| |||||||||||| |||| Sbjct: 129 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacaga 188 Query: 257 ttatggagaacaatatcccggccaacgactacctggagaacataaagatttgcaagagaa 316 ||||||||||||||||| |||| | |||||| |||||||| | ||||||| ||||| Sbjct: 189 ctatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaa 248 Query: 317 cgcgaagggtctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttc 376 | |||| |||||||||||||| |||||||| | |||||||||||| |||||||||| Sbjct: 249 catcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttc 308 Query: 377 gaccgctccaatatgtacgtacaacgagtgcagggggtgccgattcaggtgtactgctga 436 ||| ||||||||||| || |||||||||||||| ||||| ||||||| ||||||||| || Sbjct: 309 gactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccga 368 Query: 437 gcaagtcccggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttg 496 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 369 gcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttg 428 Query: 497 ccacaggtgat-tttaataattaggaggagcttct 530 ||||||||||| |||||||||| ||||||||||| Sbjct: 429 ccacaggtgatcattaataattaagaggagcttct 463 >emb|CT829880.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA033C19, full insert sequence Length = 610 Score = 379 bits (191), Expect = e-101 Identities = 357/411 (86%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 121 tttgaagaagggttatggccaatggttgccccacaactacctcaaactccctgctcctct 180 |||||||||||||||||||||||| |||||||||| ||||| ||| |||| ||| ||||| Sbjct: 11 tttgaagaagggttatggccaatgcttgccccacatctaccacaagctccttgcccctct 70 Query: 181 tcttcctcctctcttgcctgcttatcggtcatgctctttgcaaccaagctcaccatggta 240 |||||||| ||| || |||||| || ||||||||| |||||| |||| |||||||| | Sbjct: 71 tcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggca 130 Query: 241 gcatctcaggtgcagattatggagaacaatatcccggccaacgactacctggagaacata 300 ||||||||||| |||| ||||||||||||||||| |||| | |||||| |||||||| Sbjct: 131 gcatctcaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacata 190 Query: 301 aagatttgcaagagaacgcgaagggtctaaacaaggagaaactgcccaatcacgcaagga 360 | ||||||| |||||| |||| |||||||||||||| |||||||| | ||||||| Sbjct: 191 tacatttgcaggagaacatcaaggttctaaacaaggagaggctgcccaaatatgcaagga 250 Query: 361 gaatgctgattggttcgaccgctccaatatgtacgtacaacgagtgcagggggtgccgat 420 ||||| ||||||||||||| ||||||||||| || |||||||||||||| ||||| |||| Sbjct: 251 gaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgat 310 Query: 421 tcaggtgtactgctgagcaagtcccggtggatgcaaatgaccccatgaatagtgcctacc 480 ||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 311 tcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttacc 370 Query: 481 attacaagtgtgtttgccacaggtgat-tttaataattaggaggagcttct 530 | ||||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 371 actacaaatgtgtttgccacaggtgatcattaataattaagaggagcttct 421 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 234 bits (118), Expect = 4e-58 Identities = 185/206 (89%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 326 tctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttcgaccgctcc 385 |||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||| Sbjct: 39839445 tctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctcc 39839504 Query: 386 aatatgtacgtacaacgagtgcagggggtgccgattcaggtgtactgctgagcaagtccc 445 |||||| || |||||||||||||| ||||| ||||||| ||||||||| ||||| ||||| Sbjct: 39839505 aatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtccc 39839564 Query: 446 ggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttgccacaggtg 505 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 39839565 agtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtg 39839624 Query: 506 at-tttaataattaggaggagcttct 530 || |||||||||| ||||||||||| Sbjct: 39839625 atcattaataattaagaggagcttct 39839650 Score = 139 bits (70), Expect = 2e-29 Identities = 149/175 (85%), Gaps = 4/175 (2%) Strand = Plus / Plus Query: 77 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 136 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 39838662 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 39838717 Query: 137 ggccaatggttgccccacaactacctcaaactccctgctcctcttcttcctcctctcttg 196 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 39838718 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 39838777 Query: 197 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcaggt 251 |||||| || ||||||||| |||||| |||| |||||||| |||||||||||| Sbjct: 39838778 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggt 39838832 >dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 234 bits (118), Expect = 4e-58 Identities = 185/206 (89%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 326 tctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttcgaccgctcc 385 |||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||| Sbjct: 20153 tctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctcc 20212 Query: 386 aatatgtacgtacaacgagtgcagggggtgccgattcaggtgtactgctgagcaagtccc 445 |||||| || |||||||||||||| ||||| ||||||| ||||||||| ||||| ||||| Sbjct: 20213 aatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtccc 20272 Query: 446 ggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttgccacaggtg 505 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 20273 agtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtg 20332 Query: 506 at-tttaataattaggaggagcttct 530 || |||||||||| ||||||||||| Sbjct: 20333 atcattaataattaagaggagcttct 20358 Score = 139 bits (70), Expect = 2e-29 Identities = 149/175 (85%), Gaps = 4/175 (2%) Strand = Plus / Plus Query: 77 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 136 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 19370 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 19425 Query: 137 ggccaatggttgccccacaactacctcaaactccctgctcctcttcttcctcctctcttg 196 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 19426 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 19485 Query: 197 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcaggt 251 |||||| || ||||||||| |||||| |||| |||||||| |||||||||||| Sbjct: 19486 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggt 19540