BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003k21 (765 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 329 1e-86 gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 329 1e-86 ref|NM_001056266.1| Oryza sativa (japonica cultivar-group) Os03g... 325 1e-85 dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 323 6e-85 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 329 bits (166), Expect = 1e-86 Identities = 233/255 (91%), Gaps = 9/255 (3%) Strand = Plus / Minus Query: 381 ttaggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatccc 440 ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9469521 ttaggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatccc 9469462 Query: 441 gcgccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgt 500 |||||||||||| |||||||||||||||||||||||||| || || ||| |||||||||| Sbjct: 9469461 gcgccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgt 9469402 Query: 501 cacaatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 560 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9469401 gaccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 9469342 Query: 561 ggcggagaaggcggccgc------caaggaggccaagtcgcccaagaagggcgcc---aa 611 |||||||||||| ||||| |||||||||||||||||||||||||| |||| || Sbjct: 9469341 ggcggagaaggccgccgccgccggcaaggaggccaagtcgcccaagaaggccgccgggaa 9469282 Query: 612 gtcccccaagaaggc 626 ||||||||||||||| Sbjct: 9469281 gtcccccaagaaggc 9469267 Score = 289 bits (146), Expect = 8e-75 Identities = 212/234 (90%) Strand = Plus / Minus Query: 55 ctagccatggacgtcgccggtgccggagcgggcgggaaggtgaagaagggggcggctggg 114 ||||||||||||| |||||| ||||||||||| |||||| |||||||||| || || ||| Sbjct: 9469849 ctagccatggacgccgccggagccggagcgggtgggaagttgaagaagggagccgccggg 9469790 Query: 115 cggaaggcgggcgggcccaggaagaagtcggtgacgcggtcggtgaaggccgggctccag 174 ||||||| |||||||| ||||||||| ||||| |||| || || ||||||||||||||| Sbjct: 9469789 aggaaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccag 9469730 Query: 175 ttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccaacgcgttggc 234 |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| | ||| Sbjct: 9469729 ttccccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggc 9469670 Query: 235 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggta 288 |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 9469669 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggta 9469616 Score = 141 bits (71), Expect = 5e-30 Identities = 131/151 (86%) Strand = Plus / Plus Query: 138 gaagtcggtgacgcggtcggtgaaggccgggctccagttccccgtcggccgcatcgggcg 197 |||| ||||| |||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 29089340 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 29089399 Query: 198 ctacctcaagaagggccgctacgcccaacgcgttggcaccggcgcccccgtctacctcgc 257 |||||||||| ||| ||||| | ||||| ||| |||||||||||||||||||| | Sbjct: 29089400 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 29089459 Query: 258 cgccgtcctcgagtacctcgccgcagaggta 288 |||||||||||||||||||||||| |||||| Sbjct: 29089460 cgccgtcctcgagtacctcgccgccgaggta 29089490 Score = 121 bits (61), Expect = 4e-24 Identities = 110/125 (88%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 85 ggcgggaaggtgaagaagggggcggctgggcggaaggcgggcgggcccaggaagaagtcg 144 ||||||||||||||||||| | | | ||| ||||||| ||||||| ||||||||| || Sbjct: 2464008 ggcgggaaggtgaagaaggcgacaggcgggaggaaggccggcgggcg-aggaagaaggcg 2464066 Query: 145 gtgacgcggtcggtgaaggccgggctccagttccccgtcggccgcatcgggcgctacctc 204 |||||||| || || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 2464067 gtgacgcgctccgtcaaggccgggctccaattccccgtcggccgtatcgggcgctacctc 2464126 Query: 205 aagaa 209 ||||| Sbjct: 2464127 aagaa 2464131 Score = 119 bits (60), Expect = 2e-23 Identities = 147/176 (83%) Strand = Plus / Plus Query: 383 aggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatcccgc 442 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| Sbjct: 29089590 aggtgctggagctggccgggaacgcggcgagggacaacaagaagaacaggatcgtgccgc 29089649 Query: 443 gccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgtca 502 | ||| | | |||||| | | ||||||||||||||| | | ||| ||| | ||||| Sbjct: 29089650 ggcacatccagctggcggtgcgcaacgacgaggagctgagcaggctgctgggcaccgtca 29089709 Query: 503 caatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaag 558 | ||||| |||||||||||||||||||||| | | ||| ||||| ||||||||| Sbjct: 29089710 cgatcgccgccggcggcgtgctgcccaacatccagcaggtcctgcttcccaagaag 29089765 >gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 329 bits (166), Expect = 1e-86 Identities = 233/255 (91%), Gaps = 9/255 (3%) Strand = Plus / Minus Query: 381 ttaggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatccc 440 ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 168800 ttaggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatccc 168741 Query: 441 gcgccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgt 500 |||||||||||| |||||||||||||||||||||||||| || || ||| |||||||||| Sbjct: 168740 gcgccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgt 168681 Query: 501 cacaatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 560 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168680 gaccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 168621 Query: 561 ggcggagaaggcggccgc------caaggaggccaagtcgcccaagaagggcgcc---aa 611 |||||||||||| ||||| |||||||||||||||||||||||||| |||| || Sbjct: 168620 ggcggagaaggccgccgccgccggcaaggaggccaagtcgcccaagaaggccgccgggaa 168561 Query: 612 gtcccccaagaaggc 626 ||||||||||||||| Sbjct: 168560 gtcccccaagaaggc 168546 Score = 289 bits (146), Expect = 8e-75 Identities = 212/234 (90%) Strand = Plus / Minus Query: 55 ctagccatggacgtcgccggtgccggagcgggcgggaaggtgaagaagggggcggctggg 114 ||||||||||||| |||||| ||||||||||| |||||| |||||||||| || || ||| Sbjct: 169128 ctagccatggacgccgccggagccggagcgggtgggaagttgaagaagggagccgccggg 169069 Query: 115 cggaaggcgggcgggcccaggaagaagtcggtgacgcggtcggtgaaggccgggctccag 174 ||||||| |||||||| ||||||||| ||||| |||| || || ||||||||||||||| Sbjct: 169068 aggaaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccag 169009 Query: 175 ttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccaacgcgttggc 234 |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| | ||| Sbjct: 169008 ttccccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggc 168949 Query: 235 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggta 288 |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 168948 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggta 168895 >ref|NM_001056266.1| Oryza sativa (japonica cultivar-group) Os03g0279200 (Os03g0279200) mRNA, complete cds Length = 753 Score = 325 bits (164), Expect = 1e-85 Identities = 231/253 (91%), Gaps = 9/253 (3%) Strand = Plus / Plus Query: 383 aggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatcccgc 442 ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 313 aggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgc 372 Query: 443 gccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgtca 502 |||||||||| |||||||||||||||||||||||||| || || ||| |||||||||| | Sbjct: 373 gccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtga 432 Query: 503 caatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaagacgg 562 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaagacgg 492 Query: 563 cggagaaggcggccgc------caaggaggccaagtcgcccaagaagggcgcc---aagt 613 |||||||||| ||||| |||||||||||||||||||||||||| |||| |||| Sbjct: 493 cggagaaggccgccgccgccggcaaggaggccaagtcgcccaagaaggccgccgggaagt 552 Query: 614 cccccaagaaggc 626 ||||||||||||| Sbjct: 553 cccccaagaaggc 565 Score = 287 bits (145), Expect = 3e-74 Identities = 211/233 (90%) Strand = Plus / Plus Query: 55 ctagccatggacgtcgccggtgccggagcgggcgggaaggtgaagaagggggcggctggg 114 ||||||||||||| |||||| ||||||||||| |||||| |||||||||| || || ||| Sbjct: 84 ctagccatggacgccgccggagccggagcgggtgggaagttgaagaagggagccgccggg 143 Query: 115 cggaaggcgggcgggcccaggaagaagtcggtgacgcggtcggtgaaggccgggctccag 174 ||||||| |||||||| ||||||||| ||||| |||| || || ||||||||||||||| Sbjct: 144 aggaaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccag 203 Query: 175 ttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccaacgcgttggc 234 |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| | ||| Sbjct: 204 ttccccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggc 263 Query: 235 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggt 287 |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 264 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggt 316 >dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 325 bits (164), Expect = 1e-85 Identities = 231/253 (91%), Gaps = 9/253 (3%) Strand = Plus / Plus Query: 383 aggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatcccgc 442 ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 314 aggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgc 373 Query: 443 gccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgtca 502 |||||||||| |||||||||||||||||||||||||| || || ||| |||||||||| | Sbjct: 374 gccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtga 433 Query: 503 caatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaagacgg 562 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaagacgg 493 Query: 563 cggagaaggcggccgc------caaggaggccaagtcgcccaagaagggcgcc---aagt 613 |||||||||| ||||| |||||||||||||||||||||||||| |||| |||| Sbjct: 494 cggagaaggccgccgccgccggcaaggaggccaagtcgcccaagaaggccgccgggaagt 553 Query: 614 cccccaagaaggc 626 ||||||||||||| Sbjct: 554 cccccaagaaggc 566 Score = 287 bits (145), Expect = 3e-74 Identities = 211/233 (90%) Strand = Plus / Plus Query: 55 ctagccatggacgtcgccggtgccggagcgggcgggaaggtgaagaagggggcggctggg 114 ||||||||||||| |||||| ||||||||||| |||||| |||||||||| || || ||| Sbjct: 85 ctagccatggacgccgccggagccggagcgggtgggaagttgaagaagggagccgccggg 144 Query: 115 cggaaggcgggcgggcccaggaagaagtcggtgacgcggtcggtgaaggccgggctccag 174 ||||||| |||||||| ||||||||| ||||| |||| || || ||||||||||||||| Sbjct: 145 aggaaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccag 204 Query: 175 ttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccaacgcgttggc 234 |||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| | ||| Sbjct: 205 ttccccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggc 264 Query: 235 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggt 287 |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 265 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggt 317 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 323 bits (163), Expect = 6e-85 Identities = 236/260 (90%), Gaps = 9/260 (3%) Strand = Plus / Plus Query: 381 ttaggtgctggagctggccgggaacgcggcgagggacaacaagaagaaccggatcatccc 440 ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 17416972 ttaggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatccc 17417031 Query: 441 gcgccacgtgcttctggcgatcaggaacgacgaggagctggggaaactgttggccggcgt 500 |||||||||||| |||||||||||||||||||||||||| || || ||| |||||||||| Sbjct: 17417032 gcgccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgt 17417091 Query: 501 cacaatcgcgcacggcggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 560 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17417092 gaccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaagac 17417151 Query: 561 ggcggagaaggcggccgc------caaggaggccaagtcgcccaagaa---gggcgccaa 611 |||||||||||| ||||| |||||||||||||||||||||||| || || ||| Sbjct: 17417152 ggcggagaaggccgccgccgccggcaaggaggccaagtcgcccaagaaggcggccggcaa 17417211 Query: 612 gtcccccaagaaggcttaga 631 ||||||||||||||| |||| Sbjct: 17417212 gtcccccaagaaggcctaga 17417231 Score = 281 bits (142), Expect = 2e-72 Identities = 211/234 (90%) Strand = Plus / Plus Query: 55 ctagccatggacgtcgccggtgccggagcgggcgggaaggtgaagaagggggcggctggg 114 ||||||||||||| |||||| ||||||||||| |||||| |||||||||| || || ||| Sbjct: 17416634 ctagccatggacgccgccggagccggagcgggtgggaagctgaagaagggagccgccggg 17416693 Query: 115 cggaaggcgggcgggcccaggaagaagtcggtgacgcggtcggtgaaggccgggctccag 174 ||||||| || ||||| ||||||||| ||||| |||| || || ||||||||||||||| Sbjct: 17416694 aggaaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccag 17416753 Query: 175 ttccccgtcggccgcatcgggcgctacctcaagaagggccgctacgcccaacgcgttggc 234 |||||||||||||| ||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 17416754 ttccccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggc 17416813 Query: 235 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggta 288 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 17416814 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggta 17416867