BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst003h17
         (510 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...   329   6e-87
dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic D...   329   6e-87
dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D...   329   6e-87
dbj|AK062712.1| Oryza sativa (japonica cultivar-group) cDNA clon...   329   6e-87
gb|AY024054.1| Oryza sativa microsatellite MRG6379 containing (G...   143   8e-31

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  329 bits (166), Expect = 6e-87
 Identities = 199/210 (94%)
 Strand = Plus / Minus

                                                                           
Query: 146     tctcctgaccgccggcgtggggtgtccgggctccaccaccggcgacgacaccctctccgc 205
               |||||||||||||||||||||||| ||  |||||||||||||||||||| ||  ||||||
Sbjct: 1676240 tctcctgaccgccggcgtggggtgccccagctccaccaccggcgacgactcctcctccgc 1676181

                                                                           
Query: 206     cgcgagcgctccccccgcctgctccgtttgcgggggtagccggggctccggcctcggcgg 265
               ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1676180 cgcgagcgctcccccagcctgcttcttttgcgggggtagccggggctccggcctcggcgg 1676121

                                                                           
Query: 266     ctttcaaagcccccttcctcacaacaggatcaaaaatcccgtcctagagttcttctacct 325
               ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1676120 ctttcaaagcccccttcctcacaacaggatccaaaatcccgtcctagagttcttctacct 1676061

                                             
Query: 326     ccccttccagaacttcctcttttggcatcc 355
               ||||||||| ||||||||||||||||||||
Sbjct: 1676060 ccccttccaaaacttcctcttttggcatcc 1676031


>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0493C11
          Length = 143113

 Score =  329 bits (166), Expect = 6e-87
 Identities = 199/210 (94%)
 Strand = Plus / Minus

                                                                         
Query: 146   tctcctgaccgccggcgtggggtgtccgggctccaccaccggcgacgacaccctctccgc 205
             |||||||||||||||||||||||| ||  |||||||||||||||||||| ||  ||||||
Sbjct: 79411 tctcctgaccgccggcgtggggtgccccagctccaccaccggcgacgactcctcctccgc 79352

                                                                         
Query: 206   cgcgagcgctccccccgcctgctccgtttgcgggggtagccggggctccggcctcggcgg 265
             ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 79351 cgcgagcgctcccccagcctgcttcttttgcgggggtagccggggctccggcctcggcgg 79292

                                                                         
Query: 266   ctttcaaagcccccttcctcacaacaggatcaaaaatcccgtcctagagttcttctacct 325
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 79291 ctttcaaagcccccttcctcacaacaggatccaaaatcccgtcctagagttcttctacct 79232

                                           
Query: 326   ccccttccagaacttcctcttttggcatcc 355
             ||||||||| ||||||||||||||||||||
Sbjct: 79231 ccccttccaaaacttcctcttttggcatcc 79202


>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0679C08
          Length = 156266

 Score =  329 bits (166), Expect = 6e-87
 Identities = 199/210 (94%)
 Strand = Plus / Minus

                                                                        
Query: 146  tctcctgaccgccggcgtggggtgtccgggctccaccaccggcgacgacaccctctccgc 205
            |||||||||||||||||||||||| ||  |||||||||||||||||||| ||  ||||||
Sbjct: 1389 tctcctgaccgccggcgtggggtgccccagctccaccaccggcgacgactcctcctccgc 1330

                                                                        
Query: 206  cgcgagcgctccccccgcctgctccgtttgcgggggtagccggggctccggcctcggcgg 265
            ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1329 cgcgagcgctcccccagcctgcttcttttgcgggggtagccggggctccggcctcggcgg 1270

                                                                        
Query: 266  ctttcaaagcccccttcctcacaacaggatcaaaaatcccgtcctagagttcttctacct 325
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1269 ctttcaaagcccccttcctcacaacaggatccaaaatcccgtcctagagttcttctacct 1210

                                          
Query: 326  ccccttccagaacttcctcttttggcatcc 355
            ||||||||| ||||||||||||||||||||
Sbjct: 1209 ccccttccaaaacttcctcttttggcatcc 1180


>dbj|AK062712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C03, full
           insert sequence
          Length = 570

 Score =  329 bits (166), Expect = 6e-87
 Identities = 199/210 (94%)
 Strand = Plus / Plus

                                                                       
Query: 146 tctcctgaccgccggcgtggggtgtccgggctccaccaccggcgacgacaccctctccgc 205
           |||||||||||||||||||||||| ||  |||||||||||||||||||| ||  ||||||
Sbjct: 159 tctcctgaccgccggcgtggggtgccccagctccaccaccggcgacgactcctcctccgc 218

                                                                       
Query: 206 cgcgagcgctccccccgcctgctccgtttgcgggggtagccggggctccggcctcggcgg 265
           ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 219 cgcgagcgctcccccagcctgcttcttttgcgggggtagccggggctccggcctcggcgg 278

                                                                       
Query: 266 ctttcaaagcccccttcctcacaacaggatcaaaaatcccgtcctagagttcttctacct 325
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 279 ctttcaaagcccccttcctcacaacaggatccaaaatcccgtcctagagttcttctacct 338

                                         
Query: 326 ccccttccagaacttcctcttttggcatcc 355
           ||||||||| ||||||||||||||||||||
Sbjct: 339 ccccttccaaaacttcctcttttggcatcc 368


>gb|AY024054.1| Oryza sativa microsatellite MRG6379 containing (GAAA)X7, closest to
           marker C402, genomic sequence
          Length = 228

 Score =  143 bits (72), Expect = 8e-31
 Identities = 78/80 (97%)
 Strand = Plus / Minus

                                                                       
Query: 276 ccccttcctcacaacaggatcaaaaatcccgtcctagagttcttctacctccccttccag 335
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 228 ccccttcctcacaacaggatccaaaatcccgtcctagagttcttctacctccccttccaa 169

                               
Query: 336 aacttcctcttttggcatcc 355
           ||||||||||||||||||||
Sbjct: 168 aacttcctcttttggcatcc 149