BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst003h07
         (481 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DQ244498.1| Zea mays clone 8560 mRNA sequence                      299   5e-78
gb|AY846831.1| Triticum aestivum ribosomal protein S29 mRNA, com...   283   3e-73
gb|DQ245928.1| Zea mays clone 92533 mRNA sequence                     280   5e-72
gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom...   184   2e-43
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   184   2e-43

>gb|DQ244498.1| Zea mays clone 8560 mRNA sequence
          Length = 572

 Score =  299 bits (151), Expect = 5e-78
 Identities = 178/187 (95%)
 Strand = Plus / Plus

                                                                       
Query: 38  gccgccgccgccgccgccatgggacactcgaacgtgtggaactcgcaccccaagaactac 97
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 49  gccgccgccgccgccgccatgggacactcgaacgtctggaactcgcaccccaagaactac 108

                                                                       
Query: 98  ggccctggatccagggtttgccgtgtttgcggcaacccgcatggcttgatccggaagttc 157
           ||||| |||||||||||||||||||| ||||||||| |||||||| ||||||| |||| |
Sbjct: 109 ggccccggatccagggtttgccgtgtctgcggcaactcgcatggcctgatccgcaagtac 168

                                                                       
Query: 158 gggctcatgtgctgcaggcagtgcttccgcagcaacgccaaggacattggcttcattaag 217
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 169 gggctgatgtgctgcaggcagtgcttccgcagcaacgccaaggacattggcttcatcaag 228

                  
Query: 218 taccgtt 224
           |||||||
Sbjct: 229 taccgtt 235


>gb|AY846831.1| Triticum aestivum ribosomal protein S29 mRNA, complete cds
          Length = 398

 Score =  283 bits (143), Expect = 3e-73
 Identities = 176/187 (94%)
 Strand = Plus / Plus

                                                                       
Query: 38  gccgccgccgccgccgccatgggacactcgaacgtgtggaactcgcaccccaagaactac 97
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 21  gccgccgccgccgccgccatgggacactcgaacgtctggaactcgcaccccaagaactac 80

                                                                       
Query: 98  ggccctggatccagggtttgccgtgtttgcggcaacccgcatggcttgatccggaagttc 157
           ||| | |||||||||||||||||||| ||||||||| |||||||| ||||||| |||| |
Sbjct: 81  ggcgccggatccagggtttgccgtgtctgcggcaactcgcatggcctgatccgcaagtac 140

                                                                       
Query: 158 gggctcatgtgctgcaggcagtgcttccgcagcaacgccaaggacattggcttcattaag 217
           ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 141 gggctgatgtgctgcaggcagtgcttccgcagcgacgccaaggacattggcttcatcaag 200

                  
Query: 218 taccgtt 224
           |||||||
Sbjct: 201 taccgtt 207


>gb|DQ245928.1| Zea mays clone 92533 mRNA sequence
          Length = 563

 Score =  280 bits (141), Expect = 5e-72
 Identities = 177/189 (93%)
 Strand = Plus / Plus

                                                                       
Query: 44  gccgccgccgccatgggacactcgaacgtgtggaactcgcaccccaagaactacggccct 103
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 88  gccgccgccgccatgggacactccaacgtgtggaactcgcaccccaagaactacggccct 147

                                                                       
Query: 104 ggatccagggtttgccgtgtttgcggcaacccgcatggcttgatccggaagttcgggctc 163
           ||||| |||||||||||||| ||||  ||||| || ||||||||||| |||| |||||||
Sbjct: 148 ggatctagggtttgccgtgtgtgcgctaacccccacggcttgatccgaaagtacgggctc 207

                                                                       
Query: 164 atgtgctgcaggcagtgcttccgcagcaacgccaaggacattggcttcattaagtaccgt 223
           ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 208 atgtgctgcagacagtgcttccgcagcaacgccaaggacattggcttcatcaagtaccgc 267

                    
Query: 224 tgaaacttg 232
           |||||||||
Sbjct: 268 tgaaacttg 276


>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
             sequence
          Length = 134496

 Score =  184 bits (93), Expect = 2e-43
 Identities = 96/97 (98%)
 Strand = Plus / Minus

                                                                         
Query: 117   gccgtgtttgcggcaacccgcatggcttgatccggaagttcgggctcatgtgctgcaggc 176
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 64331 gccgtgtttgcggcaacccgcatggcttgatccggaagtacgggctcatgtgctgcaggc 64272

                                                  
Query: 177   agtgcttccgcagcaacgccaaggacattggcttcat 213
             |||||||||||||||||||||||||||||||||||||
Sbjct: 64271 agtgcttccgcagcaacgccaaggacattggcttcat 64235



 Score =  135 bits (68), Expect = 2e-28
 Identities = 74/76 (97%)
 Strand = Plus / Minus

                                                                         
Query: 42    ccgccgccgccgccatgggacactcgaacgtgtggaactcgcaccccaagaactacggcc 101
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 64664 ccgccgccgccgccatgggacactccaacgtgtggaactcgcaccccaagaactacggcc 64605

                             
Query: 102   ctggatccagggtttg 117
             | ||||||||||||||
Sbjct: 64604 ccggatccagggtttg 64589


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  184 bits (93), Expect = 2e-43
 Identities = 96/97 (98%)
 Strand = Plus / Minus

                                                                            
Query: 117      gccgtgtttgcggcaacccgcatggcttgatccggaagttcgggctcatgtgctgcaggc 176
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31829621 gccgtgtttgcggcaacccgcatggcttgatccggaagtacgggctcatgtgctgcaggc 31829562

                                                     
Query: 177      agtgcttccgcagcaacgccaaggacattggcttcat 213
                |||||||||||||||||||||||||||||||||||||
Sbjct: 31829561 agtgcttccgcagcaacgccaaggacattggcttcat 31829525



 Score =  135 bits (68), Expect = 2e-28
 Identities = 74/76 (97%)
 Strand = Plus / Minus

                                                                            
Query: 42       ccgccgccgccgccatgggacactcgaacgtgtggaactcgcaccccaagaactacggcc 101
                ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 31829954 ccgccgccgccgccatgggacactccaacgtgtggaactcgcaccccaagaactacggcc 31829895

                                
Query: 102      ctggatccagggtttg 117
                | ||||||||||||||
Sbjct: 31829894 ccggatccagggtttg 31829879