BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003f14 (1479 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049872.1| Oryza sativa (japonica cultivar-group) Os01g... 839 0.0 dbj|AK068120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 839 0.0 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 1e-35 dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 161 1e-35 dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 161 1e-35 >ref|NM_001049872.1| Oryza sativa (japonica cultivar-group) Os01g0558800 (Os01g0558800) mRNA, complete cds Length = 1607 Score = 839 bits (423), Expect = 0.0 Identities = 564/611 (92%) Strand = Plus / Plus Query: 406 gaggatgactacgaccatgaccccgacatcgcggacataatgggcgagtacttcgacgac 465 |||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||||||| Sbjct: 446 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 505 Query: 466 cccaacaaagcccagtcgcgcatggaggagaggataaggaagaagcggcacaagatcgtg 525 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 506 cccaacaaagcccagtctcgcatggaggagaggataaagaagaagcggcacaagatcgtg 565 Query: 526 caggccaagaccggctcacccaatcccatgaaggtcgtcttcaacaagtttgacttctcc 585 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 566 caggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtttgacttctcc 625 Query: 586 aattcgtatatgtggttcgagttctaccatgctctattgccgaaagatgtgaccttaatt 645 |||||||| || ||||||||||||||||||||| || |||| |||||||||||||||||| Sbjct: 626 aattcgtacatatggttcgagttctaccatgctttactgccaaaagatgtgaccttaatt 685 Query: 646 tgtgatgctctgcggtcatggtatatagttgggcgccttggtgggtgcaattctatgaat 705 || |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 686 tgcgatgctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaat 745 Query: 706 atgcagttatcacagttgcctttagattgtaaaagaccaagttatgatgctcttgaagga 765 |||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 746 atgcagctatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaagga 805 Query: 766 tcaaacatcaccccaacatccttttacaacattggtgattttgagattcaagataatcta 825 | || | ||| ||||||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 806 gcgaataccacaccaacatccttttacaatattggtgatcttgagattcaagataatata 865 Query: 826 gcacgtgtatgggtagacattggtattcacgaaccattgcttttggacatcctgctcaat 885 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 866 gcacgtgtatgggtagacattggtattcacgaaccgttgcttttggacatcctgcttaat 925 Query: 886 gcattaaccaccataaattcagatcatgtgggcattaagcaagtacagtttggtgggtta 945 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 926 gcattaacgaccataaattcagatcatgtgggcattaagcaagtgcagtttggagggagt 985 Query: 946 gagtttgcgaactggaatgagaacatgaaaacggaagaaactggatatagtgtccacaaa 1005 || ||| |||||||| ||| || |||||||||||||| |||||||||||||||||||| Sbjct: 986 gaatttcagaactggagcgaggacttgaaaacggaagaagctggatatagtgtccacaaa 1045 Query: 1006 atttagaaagc 1016 ||||||||||| Sbjct: 1046 atttagaaagc 1056 >dbj|AK068120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135L15, full insert sequence Length = 1611 Score = 839 bits (423), Expect = 0.0 Identities = 564/611 (92%) Strand = Plus / Plus Query: 406 gaggatgactacgaccatgaccccgacatcgcggacataatgggcgagtacttcgacgac 465 |||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||||||| Sbjct: 449 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 508 Query: 466 cccaacaaagcccagtcgcgcatggaggagaggataaggaagaagcggcacaagatcgtg 525 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 509 cccaacaaagcccagtctcgcatggaggagaggataaagaagaagcggcacaagatcgtg 568 Query: 526 caggccaagaccggctcacccaatcccatgaaggtcgtcttcaacaagtttgacttctcc 585 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 569 caggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtttgacttctcc 628 Query: 586 aattcgtatatgtggttcgagttctaccatgctctattgccgaaagatgtgaccttaatt 645 |||||||| || ||||||||||||||||||||| || |||| |||||||||||||||||| Sbjct: 629 aattcgtacatatggttcgagttctaccatgctttactgccaaaagatgtgaccttaatt 688 Query: 646 tgtgatgctctgcggtcatggtatatagttgggcgccttggtgggtgcaattctatgaat 705 || |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 689 tgcgatgctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaat 748 Query: 706 atgcagttatcacagttgcctttagattgtaaaagaccaagttatgatgctcttgaagga 765 |||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 749 atgcagctatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaagga 808 Query: 766 tcaaacatcaccccaacatccttttacaacattggtgattttgagattcaagataatcta 825 | || | ||| ||||||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 809 gcgaataccacaccaacatccttttacaatattggtgatcttgagattcaagataatata 868 Query: 826 gcacgtgtatgggtagacattggtattcacgaaccattgcttttggacatcctgctcaat 885 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 869 gcacgtgtatgggtagacattggtattcacgaaccgttgcttttggacatcctgcttaat 928 Query: 886 gcattaaccaccataaattcagatcatgtgggcattaagcaagtacagtttggtgggtta 945 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 929 gcattaacgaccataaattcagatcatgtgggcattaagcaagtgcagtttggagggagt 988 Query: 946 gagtttgcgaactggaatgagaacatgaaaacggaagaaactggatatagtgtccacaaa 1005 || ||| |||||||| ||| || |||||||||||||| |||||||||||||||||||| Sbjct: 989 gaatttcagaactggagcgaggacttgaaaacggaagaagctggatatagtgtccacaaa 1048 Query: 1006 atttagaaagc 1016 ||||||||||| Sbjct: 1049 atttagaaagc 1059 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 161 bits (81), Expect = 1e-35 Identities = 114/125 (91%) Strand = Plus / Minus Query: 713 tatcacagttgcctttagattgtaaaagaccaagttatgatgctcttgaaggatcaaaca 772 ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | || | Sbjct: 21150396 tatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaaggagcgaata 21150337 Query: 773 tcaccccaacatccttttacaacattggtgattttgagattcaagataatctagcacgtg 832 ||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| Sbjct: 21150336 ccacaccaacatccttttacaatattggtgatcttgagattcaagataatatagcacgtg 21150277 Query: 833 tatgg 837 ||||| Sbjct: 21150276 tatgg 21150272 Score = 159 bits (80), Expect = 4e-35 Identities = 86/88 (97%) Strand = Plus / Minus Query: 487 atggaggagaggataaggaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 546 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21151126 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 21151067 Query: 547 aatcccatgaaggtcgtcttcaacaagt 574 || ||||||||||||||||||||||||| Sbjct: 21151066 aaccccatgaaggtcgtcttcaacaagt 21151039 Score = 121 bits (61), Expect = 9e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 836 gggtagacattggtattcacgaaccattgcttttggacatcctgctcaatgcattaacca 895 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 21149698 gggtagacattggtattcacgaaccgttgcttttggacatcctgcttaatgcattaacga 21149639 Query: 896 ccataaattcaga 908 ||||||||||||| Sbjct: 21149638 ccataaattcaga 21149626 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 909 tcatgtgggcattaagcaagtacagtttggtgggttagagtttgcgaactggaatgagaa 968 ||||||||||||||||||||| |||||||| ||| || ||| |||||||| ||| | Sbjct: 21148397 tcatgtgggcattaagcaagtgcagtttggagggagtgaatttcagaactggagcgagga 21148338 Query: 969 catgaaaacggaagaaactggatatagtgtccacaaaatttagaaagc 1016 | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 21148337 cttgaaaacggaagaagctggatatagtgtccacaaaatttagaaagc 21148290 Score = 111 bits (56), Expect = 8e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 573 gtttgacttctccaattcgtatatgtggttcgagttctaccatgctctattgccgaaaga 632 ||||||||||||||||||||| || ||||||||||||||||||||| || |||| ||||| Sbjct: 21150902 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 21150843 Query: 633 tgtgaccttaatttgtgatg 652 ||||||||||||||| |||| Sbjct: 21150842 tgtgaccttaatttgcgatg 21150823 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 406 gaggatgactacgaccatgaccccgacatcgcggacataatgggcgagtacttcgacgac 465 |||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||||||| Sbjct: 21151304 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 21151245 Query: 466 cccaacaaagcccagtc 482 ||||||||||||||||| Sbjct: 21151244 cccaacaaagcccagtc 21151228 Score = 95.6 bits (48), Expect = 5e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 652 gctctgcggtcatggtatatagttgggcgccttggtgggtgcaattctatgaatatgcag 711 ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 21150684 gctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaatatgcag 21150625 >dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 161 bits (81), Expect = 1e-35 Identities = 114/125 (91%) Strand = Plus / Minus Query: 713 tatcacagttgcctttagattgtaaaagaccaagttatgatgctcttgaaggatcaaaca 772 ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | || | Sbjct: 117941 tatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaaggagcgaata 117882 Query: 773 tcaccccaacatccttttacaacattggtgattttgagattcaagataatctagcacgtg 832 ||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| Sbjct: 117881 ccacaccaacatccttttacaatattggtgatcttgagattcaagataatatagcacgtg 117822 Query: 833 tatgg 837 ||||| Sbjct: 117821 tatgg 117817 Score = 159 bits (80), Expect = 4e-35 Identities = 86/88 (97%) Strand = Plus / Minus Query: 487 atggaggagaggataaggaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 546 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 118612 Query: 547 aatcccatgaaggtcgtcttcaacaagt 574 || ||||||||||||||||||||||||| Sbjct: 118611 aaccccatgaaggtcgtcttcaacaagt 118584 Score = 121 bits (61), Expect = 9e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 836 gggtagacattggtattcacgaaccattgcttttggacatcctgctcaatgcattaacca 895 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 117243 gggtagacattggtattcacgaaccgttgcttttggacatcctgcttaatgcattaacga 117184 Query: 896 ccataaattcaga 908 ||||||||||||| Sbjct: 117183 ccataaattcaga 117171 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 909 tcatgtgggcattaagcaagtacagtttggtgggttagagtttgcgaactggaatgagaa 968 ||||||||||||||||||||| |||||||| ||| || ||| |||||||| ||| | Sbjct: 115942 tcatgtgggcattaagcaagtgcagtttggagggagtgaatttcagaactggagcgagga 115883 Query: 969 catgaaaacggaagaaactggatatagtgtccacaaaatttagaaagc 1016 | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115882 cttgaaaacggaagaagctggatatagtgtccacaaaatttagaaagc 115835 Score = 111 bits (56), Expect = 8e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 573 gtttgacttctccaattcgtatatgtggttcgagttctaccatgctctattgccgaaaga 632 ||||||||||||||||||||| || ||||||||||||||||||||| || |||| ||||| Sbjct: 118447 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 118388 Query: 633 tgtgaccttaatttgtgatg 652 ||||||||||||||| |||| Sbjct: 118387 tgtgaccttaatttgcgatg 118368 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 406 gaggatgactacgaccatgaccccgacatcgcggacataatgggcgagtacttcgacgac 465 |||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||||||| Sbjct: 118849 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 118790 Query: 466 cccaacaaagcccagtc 482 ||||||||||||||||| Sbjct: 118789 cccaacaaagcccagtc 118773 Score = 95.6 bits (48), Expect = 5e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 652 gctctgcggtcatggtatatagttgggcgccttggtgggtgcaattctatgaatatgcag 711 ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 118229 gctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaatatgcag 118170 >dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 161 bits (81), Expect = 1e-35 Identities = 114/125 (91%) Strand = Plus / Minus Query: 713 tatcacagttgcctttagattgtaaaagaccaagttatgatgctcttgaaggatcaaaca 772 ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | || | Sbjct: 47905 tatcacagttgcctttagactgtcaaagaccaacttatgatgctcttgaaggagcgaata 47846 Query: 773 tcaccccaacatccttttacaacattggtgattttgagattcaagataatctagcacgtg 832 ||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| Sbjct: 47845 ccacaccaacatccttttacaatattggtgatcttgagattcaagataatatagcacgtg 47786 Query: 833 tatgg 837 ||||| Sbjct: 47785 tatgg 47781 Score = 159 bits (80), Expect = 4e-35 Identities = 86/88 (97%) Strand = Plus / Minus Query: 487 atggaggagaggataaggaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 546 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48635 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 48576 Query: 547 aatcccatgaaggtcgtcttcaacaagt 574 || ||||||||||||||||||||||||| Sbjct: 48575 aaccccatgaaggtcgtcttcaacaagt 48548 Score = 121 bits (61), Expect = 9e-24 Identities = 70/73 (95%) Strand = Plus / Minus Query: 836 gggtagacattggtattcacgaaccattgcttttggacatcctgctcaatgcattaacca 895 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 47207 gggtagacattggtattcacgaaccgttgcttttggacatcctgcttaatgcattaacga 47148 Query: 896 ccataaattcaga 908 ||||||||||||| Sbjct: 47147 ccataaattcaga 47135 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 909 tcatgtgggcattaagcaagtacagtttggtgggttagagtttgcgaactggaatgagaa 968 ||||||||||||||||||||| |||||||| ||| || ||| |||||||| ||| | Sbjct: 45906 tcatgtgggcattaagcaagtgcagtttggagggagtgaatttcagaactggagcgagga 45847 Query: 969 catgaaaacggaagaaactggatatagtgtccacaaaatttagaaagc 1016 | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 45846 cttgaaaacggaagaagctggatatagtgtccacaaaatttagaaagc 45799 Score = 111 bits (56), Expect = 8e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 573 gtttgacttctccaattcgtatatgtggttcgagttctaccatgctctattgccgaaaga 632 ||||||||||||||||||||| || ||||||||||||||||||||| || |||| ||||| Sbjct: 48411 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 48352 Query: 633 tgtgaccttaatttgtgatg 652 ||||||||||||||| |||| Sbjct: 48351 tgtgaccttaatttgcgatg 48332 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Minus Query: 406 gaggatgactacgaccatgaccccgacatcgcggacataatgggcgagtacttcgacgac 465 |||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||||||| Sbjct: 48813 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 48754 Query: 466 cccaacaaagcccagtc 482 ||||||||||||||||| Sbjct: 48753 cccaacaaagcccagtc 48737 Score = 95.6 bits (48), Expect = 5e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 652 gctctgcggtcatggtatatagttgggcgccttggtgggtgcaattctatgaatatgcag 711 ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct: 48193 gctctgcggtcatggcatatagttgggcgcctgggcgggtgcaattctatgaatatgcag 48134