BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst003d13 (777 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ246195.1| Zea mays clone 16336 mRNA sequence 525 e-146 emb|CT829122.1| Oryza sativa (indica cultivar-group) cDNA clone:... 525 e-146 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 525 e-146 dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic D... 525 e-146 dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 g... 525 e-146 >gb|DQ246195.1| Zea mays clone 16336 mRNA sequence Length = 948 Score = 525 bits (265), Expect = e-146 Identities = 403/449 (89%) Strand = Plus / Plus Query: 184 gccgccgcgccgtcgccgtcgcgtccaccgccaccgagtccccgaaggtcctggagctcg 243 |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| Sbjct: 199 gccgccgcgccgtcgccgtcgcgtgcaccgccaccgagtcccccaagatcctggagctcg 258 Query: 244 gcgacgccatcgctgggctcaccctccaggaggctcgcagcctcgttgaccacctccagg 303 | ||||||||||| |||||||| ||| ||||||| ||||||||||| ||||||||||||| Sbjct: 259 gggacgccatcgccgggctcacgctcgaggaggcccgcagcctcgtcgaccacctccagg 318 Query: 304 agcgcctcggcgtctccgcagccgccttcgcgcctgccgccatcatcgcggcgcccggcg 363 |||| ||||||||| |||| || ||||||||||| |||||| || ||||||||||||| | Sbjct: 319 agcggctcggcgtcaccgccgcggccttcgcgccggccgccgtcgtcgcggcgcccgggg 378 Query: 364 cggccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtgg 423 ||| || | || ||| |||||||||| |||||| | |||||||||||||||||||||| Sbjct: 379 cgggcggcggggccgcggccgaggaggaggcccccgtcgagaagacggagttcgacgtga 438 Query: 424 tcatcgaggaggtgcccagcagcgtgcgtatcgcgaccatcaaggtggtgcgcgctctca 483 | ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| |||| Sbjct: 439 tgatcgaagaggtgcccagcagcgcgcgtatcgccactatcaaggtggtgcgcgcgctca 498 Query: 484 ccagcctggcgctgaaggatgccaaggacctcatcgaggggctccccaagaagcttaagg 543 ||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||| | || | Sbjct: 499 ccagcctcgcgctcaaggaggccaaggaccttatcgagggtctccccaagaaggtcaaag 558 Query: 544 aggccgtgagcaaggatgaggccgaggaggccaagaagcagcttgaggaggtcggcgcca 603 ||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 559 aggccgtcagcaaggacgaggccgaggacgccaagaagcagctcgaggaggtcggcgcca 618 Query: 604 aggtgtccatcgcgtgacactaggtatac 632 ||||||| ||||||||||||||||||||| Sbjct: 619 aggtgtctatcgcgtgacactaggtatac 647 >emb|CT829122.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN013N05, full insert sequence Length = 827 Score = 525 bits (265), Expect = e-146 Identities = 402/447 (89%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 186 cgccgcgccgtcgccgtcg---cgtccaccgccaccgagtccccgaaggtcctggagctc 242 ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 197 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 256 Query: 243 ggcgacgccatcgctgggctcaccctccaggaggctcgcagcctcgttgaccacctccag 302 || ||||||||||| |||||||||||| ||||||| || ||||||| |||||||||||| Sbjct: 257 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 316 Query: 303 gagcgcctcggcgtctccgcagccgccttcgcgcctgccgccatcatcgcggcgcccggc 362 |||||||||||||||||||| |||||||||||||| |||||| || |||| ||||||||| Sbjct: 317 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 376 Query: 363 gcggccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 422 |||| || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 377 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 436 Query: 423 gtcatcgaggaggtgcccagcagcgtgcgtatcgcgaccatcaaggtggtgcgcgctctc 482 |||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| ||| Sbjct: 437 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 496 Query: 483 accagcctggcgctgaaggatgccaaggacctcatcgaggggctccccaagaagcttaag 542 |||| |||||| || ||||| |||||||||||||||||||| |||||||||||| | ||| Sbjct: 497 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 556 Query: 543 gaggccgtgagcaaggatgaggccgaggaggccaagaagcagcttgaggaggtcggcgcc 602 |||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 557 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 616 Query: 603 aaggtgtccatcgcgtgacactaggta 629 ||||||||||| ||||||||||||||| Sbjct: 617 aaggtgtccattgcgtgacactaggta 643 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 80 catggcttccaccacgctctcctcccccttctccctcctctcgctcccctcttcctcc 137 ||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 76 catggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 133 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 525 bits (265), Expect = e-146 Identities = 402/447 (89%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 186 cgccgcgccgtcgccgtcg---cgtccaccgccaccgagtccccgaaggtcctggagctc 242 ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 27035253 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 27035312 Query: 243 ggcgacgccatcgctgggctcaccctccaggaggctcgcagcctcgttgaccacctccag 302 || ||||||||||| |||||||||||| ||||||| || ||||||| |||||||||||| Sbjct: 27035313 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 27035372 Query: 303 gagcgcctcggcgtctccgcagccgccttcgcgcctgccgccatcatcgcggcgcccggc 362 |||||||||||||||||||| |||||||||||||| |||||| || |||| ||||||||| Sbjct: 27035373 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 27035432 Query: 363 gcggccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 422 |||| || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 27035433 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 27035492 Query: 423 gtcatcgaggaggtgcccagcagcgtgcgtatcgcgaccatcaaggtggtgcgcgctctc 482 |||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| ||| Sbjct: 27035493 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 27035552 Query: 483 accagcctggcgctgaaggatgccaaggacctcatcgaggggctccccaagaagcttaag 542 |||| |||||| || ||||| |||||||||||||||||||| |||||||||||| | ||| Sbjct: 27035553 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 27035612 Query: 543 gaggccgtgagcaaggatgaggccgaggaggccaagaagcagcttgaggaggtcggcgcc 602 |||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 27035613 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 27035672 Query: 603 aaggtgtccatcgcgtgacactaggta 629 ||||||||||| ||||||||||||||| Sbjct: 27035673 aaggtgtccattgcgtgacactaggta 27035699 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 80 catggcttccaccacgctctcctcccccttctccctcctctcgctcccctcttcctcc 137 ||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 27035132 catggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 27035189 >dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 525 bits (265), Expect = e-146 Identities = 402/447 (89%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 186 cgccgcgccgtcgccgtcg---cgtccaccgccaccgagtccccgaaggtcctggagctc 242 ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 94084 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 94143 Query: 243 ggcgacgccatcgctgggctcaccctccaggaggctcgcagcctcgttgaccacctccag 302 || ||||||||||| |||||||||||| ||||||| || ||||||| |||||||||||| Sbjct: 94144 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 94203 Query: 303 gagcgcctcggcgtctccgcagccgccttcgcgcctgccgccatcatcgcggcgcccggc 362 |||||||||||||||||||| |||||||||||||| |||||| || |||| ||||||||| Sbjct: 94204 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 94263 Query: 363 gcggccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 422 |||| || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 94264 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 94323 Query: 423 gtcatcgaggaggtgcccagcagcgtgcgtatcgcgaccatcaaggtggtgcgcgctctc 482 |||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| ||| Sbjct: 94324 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 94383 Query: 483 accagcctggcgctgaaggatgccaaggacctcatcgaggggctccccaagaagcttaag 542 |||| |||||| || ||||| |||||||||||||||||||| |||||||||||| | ||| Sbjct: 94384 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 94443 Query: 543 gaggccgtgagcaaggatgaggccgaggaggccaagaagcagcttgaggaggtcggcgcc 602 |||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 94444 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 94503 Query: 603 aaggtgtccatcgcgtgacactaggta 629 ||||||||||| ||||||||||||||| Sbjct: 94504 aaggtgtccattgcgtgacactaggta 94530 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 80 catggcttccaccacgctctcctcccccttctccctcctctcgctcccctcttcctcc 137 ||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 93963 catggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 94020 >dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 gene for chloroplast ribosomal protein L12, complete cds Length = 2075 Score = 525 bits (265), Expect = e-146 Identities = 402/447 (89%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 186 cgccgcgccgtcgccgtcg---cgtccaccgccaccgagtccccgaaggtcctggagctc 242 ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| Sbjct: 1299 cgccgcgccgtcgccgtggtggcgtccaccgccaccgagtcccccaaggtcctggagctc 1358 Query: 243 ggcgacgccatcgctgggctcaccctccaggaggctcgcagcctcgttgaccacctccag 302 || ||||||||||| |||||||||||| ||||||| || ||||||| |||||||||||| Sbjct: 1359 ggggacgccatcgcggggctcaccctcgaggaggcgcggggcctcgtggaccacctccag 1418 Query: 303 gagcgcctcggcgtctccgcagccgccttcgcgcctgccgccatcatcgcggcgcccggc 362 |||||||||||||||||||| |||||||||||||| |||||| || |||| ||||||||| Sbjct: 1419 gagcgcctcggcgtctccgccgccgccttcgcgcccgccgccgtcgtcgccgcgcccggc 1478 Query: 363 gcggccgcggcgggcgccgccgaggaggcggccccggccgagaagacggagttcgacgtg 422 |||| || ||||||||||||| || | |||||| |||||||||||||||||||||||| Sbjct: 1479 gcgggcggcgcgggcgccgccgccgacgaggcccccgccgagaagacggagttcgacgtg 1538 Query: 423 gtcatcgaggaggtgcccagcagcgtgcgtatcgcgaccatcaaggtggtgcgcgctctc 482 |||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| ||| Sbjct: 1539 gtcatcgaggaggttcccagcagcgcgcgcatcgccagcatcaaggtggtgcgcgcgctc 1598 Query: 483 accagcctggcgctgaaggatgccaaggacctcatcgaggggctccccaagaagcttaag 542 |||| |||||| || ||||| |||||||||||||||||||| |||||||||||| | ||| Sbjct: 1599 accaacctggccctcaaggaggccaaggacctcatcgagggcctccccaagaaggtcaag 1658 Query: 543 gaggccgtgagcaaggatgaggccgaggaggccaagaagcagcttgaggaggtcggcgcc 602 |||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1659 gagggtgtcagcaaggacgaggccgaggatgccaagaagcagctcgaggaggtcggcgcc 1718 Query: 603 aaggtgtccatcgcgtgacactaggta 629 ||||||||||| ||||||||||||||| Sbjct: 1719 aaggtgtccattgcgtgacactaggta 1745 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 80 catggcttccaccacgctctcctcccccttctccctcctctcgctcccctcttcctcc 137 ||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 1178 catggcttccaccgcgctctcctccgccttctccctcctctccctcccctcctcctcc 1235